Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS05595

Experiment: R2A control

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A control
1,205,873	+				+0.5
1,205,873	+				+0.5
1,205,873	+				-0.1
1,205,874	-				-0.2
1,205,874	-				-0.3
1,205,874	-				+0.7
1,205,874	-				+0.1
1,205,874	-				-0.4
1,205,894	+				+0.3
1,205,894	+				+1.3
1,205,894	+				-0.6
1,205,894	+				+0.7
1,205,895	-				+0.5
1,205,895	-				-0.9
1,205,914	-				+0.5
1,205,935	-				-0.8
1,206,045	+		LRK54_RS05590	0.20	+1.5
1,206,045	+		LRK54_RS05590	0.20	+0.5
1,206,045	+		LRK54_RS05590	0.20	-0.2
1,206,045	+		LRK54_RS05590	0.20	-0.3
1,206,045	+		LRK54_RS05590	0.20	+0.4
1,206,045	+		LRK54_RS05590	0.20	-0.7
1,206,045	+		LRK54_RS05590	0.20	+0.8
1,206,045	+		LRK54_RS05590	0.20	+0.0
1,206,045	+		LRK54_RS05590	0.20	-2.3
1,206,046	-		LRK54_RS05590	0.20	-0.8
1,206,046	-		LRK54_RS05590	0.20	+0.4
1,206,046	-		LRK54_RS05590	0.20	-0.9
1,206,046	-		LRK54_RS05590	0.20	+1.3
1,206,046	-		LRK54_RS05590	0.20	+0.1
1,206,046	-		LRK54_RS05590	0.20	+0.7
1,206,046	-		LRK54_RS05590	0.20	-0.1
1,206,046	-		LRK54_RS05590	0.20	-0.1
1,206,046	-		LRK54_RS05590	0.20	+1.5
1,206,128	+		LRK54_RS05590	0.28	-0.1
1,206,128	+		LRK54_RS05590	0.28	+0.4
1,206,128	+		LRK54_RS05590	0.28	+0.1
1,206,128	+		LRK54_RS05590	0.28	+1.4
1,206,128	+		LRK54_RS05590	0.28	-0.9
1,206,128	+		LRK54_RS05590	0.28	+0.8
1,206,128	+		LRK54_RS05590	0.28	+0.5
1,206,128	+		LRK54_RS05590	0.28	+0.8
1,206,128	+		LRK54_RS05590	0.28	+0.8
1,206,128	+		LRK54_RS05590	0.28	-0.5
1,206,129	-		LRK54_RS05590	0.28	+1.4
1,206,129	-		LRK54_RS05590	0.28	+0.0
1,206,129	-		LRK54_RS05590	0.28	+0.9
1,206,129	-		LRK54_RS05590	0.28	-0.1
1,206,129	-		LRK54_RS05590	0.28	+0.0
1,206,129	-		LRK54_RS05590	0.28	-0.1
1,206,129	-		LRK54_RS05590	0.28	+0.2
1,206,129	-		LRK54_RS05590	0.28	-1.7
1,206,129	-		LRK54_RS05590	0.28	-1.1
1,206,129	-		LRK54_RS05590	0.28	+0.0
1,206,129	-		LRK54_RS05590	0.28	-0.1
1,206,228	+		LRK54_RS05590	0.38	-0.4
1,206,228	+		LRK54_RS05590	0.38	-0.5
1,206,255	+		LRK54_RS05590	0.41	+1.3
1,206,255	+		LRK54_RS05590	0.41	+0.6
1,206,255	+		LRK54_RS05590	0.41	+0.7
1,206,255	+		LRK54_RS05590	0.41	+1.0
1,206,256	-		LRK54_RS05590	0.41	-1.2
1,206,256	-		LRK54_RS05590	0.41	+1.1
1,206,256	-		LRK54_RS05590	0.41	-1.5
1,206,256	-		LRK54_RS05590	0.41	+0.1
1,206,274	+		LRK54_RS05590	0.43	+0.5
1,206,274	+		LRK54_RS05590	0.43	-0.2
1,206,274	+		LRK54_RS05590	0.43	-1.2
1,206,290	+		LRK54_RS05590	0.45	+1.3
1,206,290	+		LRK54_RS05590	0.45	+0.2
1,206,290	+		LRK54_RS05590	0.45	+0.6
1,206,291	-		LRK54_RS05590	0.45	-0.1
1,206,291	-		LRK54_RS05590	0.45	-1.4
1,206,336	+		LRK54_RS05590	0.49	+1.2
1,206,336	+		LRK54_RS05590	0.49	-0.2
1,206,336	+		LRK54_RS05590	0.49	+0.2
1,206,336	+		LRK54_RS05590	0.49	-0.7
1,206,336	+		LRK54_RS05590	0.49	-0.2
1,206,336	+		LRK54_RS05590	0.49	-0.5
1,206,336	+		LRK54_RS05590	0.49	-0.1
1,206,336	+		LRK54_RS05590	0.49	-0.6
1,206,336	+		LRK54_RS05590	0.49	-0.7
1,206,336	+		LRK54_RS05590	0.49	+0.3
1,206,337	-		LRK54_RS05590	0.49	-0.6
1,206,337	-		LRK54_RS05590	0.49	+0.0
1,206,337	-		LRK54_RS05590	0.49	+0.5
1,206,337	-		LRK54_RS05590	0.49	+0.2
1,206,337	-		LRK54_RS05590	0.49	-2.2
1,206,337	-		LRK54_RS05590	0.49	-2.5
1,206,337	-		LRK54_RS05590	0.49	+0.2
1,206,337	-		LRK54_RS05590	0.49	+0.3
1,206,337	-		LRK54_RS05590	0.49	-1.3
1,206,337	-		LRK54_RS05590	0.49	+0.8
1,206,337	-		LRK54_RS05590	0.49	+0.9
1,206,337	-		LRK54_RS05590	0.49	+0.3
1,206,337	-		LRK54_RS05590	0.49	-0.6
1,206,337	-		LRK54_RS05590	0.49	+0.5
1,206,337	-		LRK54_RS05590	0.49	+0.9
1,206,337	-		LRK54_RS05590	0.49	+0.3
1,206,337	-		LRK54_RS05590	0.49	-0.1
1,206,337	-		LRK54_RS05590	0.49	-0.3
1,206,337	-		LRK54_RS05590	0.49	-0.5
1,206,337	-		LRK54_RS05590	0.49	-0.2
1,206,337	-		LRK54_RS05590	0.49	-1.0
1,206,337	-		LRK54_RS05590	0.49	+0.0
1,206,337	-		LRK54_RS05590	0.49	+0.3
1,206,446	+		LRK54_RS05590	0.60	+0.4
1,206,446	+		LRK54_RS05590	0.60	+0.2
1,206,446	+		LRK54_RS05590	0.60	-0.4
1,206,446	+		LRK54_RS05590	0.60	-0.5
1,206,447	-		LRK54_RS05590	0.60	+0.5
1,206,506	+		LRK54_RS05590	0.66	+0.3
1,206,506	+		LRK54_RS05590	0.66	-0.2
1,206,506	+		LRK54_RS05590	0.66	-1.2
1,206,506	+		LRK54_RS05590	0.66	-0.8
1,206,506	+		LRK54_RS05590	0.66	+0.4
1,206,506	+		LRK54_RS05590	0.66	+1.4
1,206,507	-		LRK54_RS05590	0.66	-0.6
1,206,507	-		LRK54_RS05590	0.66	+2.3
1,206,507	-		LRK54_RS05590	0.66	-0.6
1,206,507	-		LRK54_RS05590	0.66	-2.1
1,206,507	-		LRK54_RS05590	0.66	-0.2
1,206,507	-		LRK54_RS05590	0.66	-0.4
1,206,507	-		LRK54_RS05590	0.66	-0.5
1,206,507	-		LRK54_RS05590	0.66	+0.4
1,206,507	-		LRK54_RS05590	0.66	+0.1
1,206,507	-		LRK54_RS05590	0.66	-1.4
1,206,507	-		LRK54_RS05590	0.66	+0.0
1,206,507	-		LRK54_RS05590	0.66	+1.7
1,206,507	-		LRK54_RS05590	0.66	+0.7
1,206,507	-		LRK54_RS05590	0.66	+0.9
1,206,507	-		LRK54_RS05590	0.66	-0.5
1,206,532	+		LRK54_RS05590	0.69	+0.1
1,206,532	+		LRK54_RS05590	0.69	+0.3
1,206,533	-		LRK54_RS05590	0.69	-0.2
1,206,533	-		LRK54_RS05590	0.69	-0.7
1,206,555	+		LRK54_RS05590	0.71	+0.9
1,206,555	+		LRK54_RS05590	0.71	-0.4
1,206,555	+		LRK54_RS05590	0.71	-0.6
1,206,555	+		LRK54_RS05590	0.71	-0.7
1,206,555	+		LRK54_RS05590	0.71	+0.9
1,206,556	-		LRK54_RS05590	0.71	-0.4
1,206,556	-		LRK54_RS05590	0.71	+0.5
1,206,563	-		LRK54_RS05590	0.72	+0.8
1,206,651	-		LRK54_RS05590	0.81	+1.1
1,206,699	+		LRK54_RS05590	0.86	-0.3
1,206,699	+		LRK54_RS05590	0.86	-1.3
1,206,699	+		LRK54_RS05590	0.86	-0.4
1,206,699	+		LRK54_RS05590	0.86	+0.2
1,206,699	+		LRK54_RS05590	0.86	+1.3
1,206,699	+		LRK54_RS05590	0.86	-1.0
1,206,700	-		LRK54_RS05590	0.86	-1.3
1,206,700	-		LRK54_RS05590	0.86	-0.4
1,206,700	-		LRK54_RS05590	0.86	+0.3
1,206,700	-		LRK54_RS05590	0.86	+0.3
1,206,700	-		LRK54_RS05590	0.86	-0.5
1,206,700	-		LRK54_RS05590	0.86	+2.9
1,206,722	+		LRK54_RS05590	0.88	-0.9
1,206,722	+		LRK54_RS05590	0.88	-0.1
1,206,722	+		LRK54_RS05590	0.88	-1.1
1,206,722	+		LRK54_RS05590	0.88	-1.9
1,206,722	+		LRK54_RS05590	0.88	-0.4
1,206,722	+		LRK54_RS05590	0.88	-0.5
1,206,722	+		LRK54_RS05590	0.88	-1.9
1,206,722	+		LRK54_RS05590	0.88	+0.1
1,206,722	+		LRK54_RS05590	0.88	+0.9
1,206,722	+		LRK54_RS05590	0.88	+0.7
1,206,722	+		LRK54_RS05590	0.88	+1.7
1,206,723	-		LRK54_RS05590	0.88	+3.0
1,206,723	-		LRK54_RS05590	0.88	-0.2
1,206,723	-		LRK54_RS05590	0.88	-0.6
1,206,723	-		LRK54_RS05590	0.88	+1.3
1,206,723	-		LRK54_RS05590	0.88	+0.6
1,206,723	-		LRK54_RS05590	0.88	+0.2
1,206,723	-		LRK54_RS05590	0.88	-1.4
1,206,723	-		LRK54_RS05590	0.88	-0.9
1,206,723	-		LRK54_RS05590	0.88	-1.6
1,206,723	-		LRK54_RS05590	0.88	+0.1
1,206,745	+				-2.2
1,206,745	+				-1.9
1,206,745	+				-0.8
1,206,745	+				+0.7
1,206,746	-				+0.7
1,206,746	-				-0.4
1,206,746	-				-0.4
1,206,875	-				+1.3
1,206,875	-				+2.3
1,206,875	-				-0.7
1,206,920	+		LRK54_RS05595	0.12	+0.7
1,206,920	+		LRK54_RS05595	0.12	-0.7
1,206,920	+		LRK54_RS05595	0.12	-0.1
1,206,920	+		LRK54_RS05595	0.12	-0.1
1,206,920	+		LRK54_RS05595	0.12	+1.3
1,206,920	+		LRK54_RS05595	0.12	+1.9
1,206,920	+		LRK54_RS05595	0.12	-1.1
1,206,921	-		LRK54_RS05595	0.12	+0.9
1,206,921	-		LRK54_RS05595	0.12	+0.5
1,206,921	-		LRK54_RS05595	0.12	+0.5
1,206,921	-		LRK54_RS05595	0.12	-0.1
1,206,932	-		LRK54_RS05595	0.14	-1.3
1,207,018	+		LRK54_RS05595	0.24	+0.4
1,207,018	+		LRK54_RS05595	0.24	-0.3
1,207,019	-		LRK54_RS05595	0.24	-0.8
1,207,019	-		LRK54_RS05595	0.24	-1.0
1,207,019	-		LRK54_RS05595	0.24	-0.9
1,207,048	+		LRK54_RS05595	0.28	+0.2
1,207,048	+		LRK54_RS05595	0.28	+0.4
1,207,048	+		LRK54_RS05595	0.28	-0.5
1,207,048	+		LRK54_RS05595	0.28	-0.1
1,207,048	+		LRK54_RS05595	0.28	-0.1
1,207,049	-		LRK54_RS05595	0.28	-0.4
1,207,049	-		LRK54_RS05595	0.28	-0.3
1,207,049	-		LRK54_RS05595	0.28	-0.2
1,207,049	-		LRK54_RS05595	0.28	-0.1
1,207,049	-		LRK54_RS05595	0.28	-0.3
1,207,049	-		LRK54_RS05595	0.28	+1.3
1,207,049	-		LRK54_RS05595	0.28	-1.8
1,207,049	-		LRK54_RS05595	0.28	+1.5
1,207,049	-		LRK54_RS05595	0.28	+0.2
1,207,049	-		LRK54_RS05595	0.28	-0.2
1,207,049	-		LRK54_RS05595	0.28	+1.3
1,207,049	-		LRK54_RS05595	0.28	-0.2
1,207,049	-		LRK54_RS05595	0.28	-0.7
1,207,072	+		LRK54_RS05595	0.31	+0.1
1,207,072	+		LRK54_RS05595	0.31	+0.6
1,207,072	+		LRK54_RS05595	0.31	-0.7
1,207,072	+		LRK54_RS05595	0.31	-0.7
1,207,072	+		LRK54_RS05595	0.31	+0.5
1,207,072	+		LRK54_RS05595	0.31	+0.4
1,207,072	+		LRK54_RS05595	0.31	+0.4
1,207,072	+		LRK54_RS05595	0.31	+0.6
1,207,072	+		LRK54_RS05595	0.31	+1.7
1,207,072	+		LRK54_RS05595	0.31	+1.0
1,207,072	+		LRK54_RS05595	0.31	-0.1
1,207,072	+		LRK54_RS05595	0.31	+0.3
1,207,072	+		LRK54_RS05595	0.31	-0.1
1,207,072	+		LRK54_RS05595	0.31	+0.0
1,207,072	+		LRK54_RS05595	0.31	-0.1
1,207,072	+		LRK54_RS05595	0.31	-0.2
1,207,073	-		LRK54_RS05595	0.31	-0.4
1,207,073	-		LRK54_RS05595	0.31	-0.4
1,207,073	-		LRK54_RS05595	0.31	-0.2
1,207,073	-		LRK54_RS05595	0.31	+0.2
1,207,073	-		LRK54_RS05595	0.31	+1.2
1,207,073	-		LRK54_RS05595	0.31	-0.2
1,207,073	-		LRK54_RS05595	0.31	+2.6
1,207,073	-		LRK54_RS05595	0.31	+0.2
1,207,073	-		LRK54_RS05595	0.31	+0.1
1,207,073	-		LRK54_RS05595	0.31	+1.5
1,207,073	-		LRK54_RS05595	0.31	-0.3
1,207,073	-		LRK54_RS05595	0.31	-1.0
1,207,073	-		LRK54_RS05595	0.31	+0.0
1,207,073	-		LRK54_RS05595	0.31	+0.3
1,207,073	-		LRK54_RS05595	0.31	+0.5
1,207,073	-		LRK54_RS05595	0.31	+0.4
1,207,073	-		LRK54_RS05595	0.31	-1.3
1,207,073	-		LRK54_RS05595	0.31	+0.8
1,207,149	+		LRK54_RS05595	0.40	+0.7
1,207,149	+		LRK54_RS05595	0.40	+0.3
1,207,149	+		LRK54_RS05595	0.40	+0.7
1,207,150	-		LRK54_RS05595	0.40	-0.5
1,207,151	+		LRK54_RS05595	0.40	-0.2
1,207,151	+		LRK54_RS05595	0.40	+1.0
1,207,151	+		LRK54_RS05595	0.40	+0.5
1,207,151	+		LRK54_RS05595	0.40	-0.2
1,207,152	-		LRK54_RS05595	0.41	+0.3
1,207,152	-		LRK54_RS05595	0.41	-0.3
1,207,152	-		LRK54_RS05595	0.41	+0.3
1,207,152	-		LRK54_RS05595	0.41	+0.8
1,207,152	-		LRK54_RS05595	0.41	+0.1
1,207,152	-		LRK54_RS05595	0.41	-0.6
1,207,152	-		LRK54_RS05595	0.41	+0.4
1,207,152	-		LRK54_RS05595	0.41	-0.2
1,207,152	-		LRK54_RS05595	0.41	-0.7
1,207,152	-		LRK54_RS05595	0.41	+0.2
1,207,261	+		LRK54_RS05595	0.54	-0.4
1,207,261	+		LRK54_RS05595	0.54	-1.6
1,207,261	+		LRK54_RS05595	0.54	+0.0
1,207,261	+		LRK54_RS05595	0.54	+0.6
1,207,261	+		LRK54_RS05595	0.54	-0.2
1,207,261	+		LRK54_RS05595	0.54	-1.6
1,207,262	-		LRK54_RS05595	0.54	-0.3
1,207,262	-		LRK54_RS05595	0.54	+0.1
1,207,262	-		LRK54_RS05595	0.54	+0.6
1,207,262	-		LRK54_RS05595	0.54	-0.5
1,207,262	-		LRK54_RS05595	0.54	-0.0
1,207,262	-		LRK54_RS05595	0.54	+0.9
1,207,262	-		LRK54_RS05595	0.54	+0.3
1,207,262	-		LRK54_RS05595	0.54	+0.6
1,207,262	-		LRK54_RS05595	0.54	-0.6
1,207,262	-		LRK54_RS05595	0.54	+0.9
1,207,264	+		LRK54_RS05595	0.54	-0.3
1,207,264	+		LRK54_RS05595	0.54	+0.6
1,207,264	+		LRK54_RS05595	0.54	-0.3
1,207,264	+		LRK54_RS05595	0.54	-0.5
1,207,264	+		LRK54_RS05595	0.54	-0.3
1,207,264	+		LRK54_RS05595	0.54	+0.2
1,207,264	+		LRK54_RS05595	0.54	+1.0
1,207,264	+		LRK54_RS05595	0.54	+2.0
1,207,264	+		LRK54_RS05595	0.54	+2.2
1,207,264	+		LRK54_RS05595	0.54	+0.2
1,207,264	+		LRK54_RS05595	0.54	+3.3
1,207,264	+		LRK54_RS05595	0.54	+0.2
1,207,264	+		LRK54_RS05595	0.54	-0.1
1,207,264	+		LRK54_RS05595	0.54	-0.4
1,207,264	+		LRK54_RS05595	0.54	+0.9
1,207,264	+		LRK54_RS05595	0.54	-1.0
1,207,264	+		LRK54_RS05595	0.54	-1.3
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