Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03531

Experiment: D-Glucosamine Hydrochloride (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucosamine Hydrochloride (N)
3,686,094	+		CCNA_03529	0.48	+0.9
3,686,106	+		CCNA_03529	0.50	-1.0
3,686,132	+		CCNA_03529	0.53	-0.1
3,686,135	-		CCNA_03529	0.53	-0.9
3,686,137	+		CCNA_03529	0.54	-0.8
3,686,137	+		CCNA_03529	0.54	+0.8
3,686,145	-		CCNA_03529	0.55	-1.0
3,686,145	-		CCNA_03529	0.55	-0.7
3,686,145	-		CCNA_03529	0.55	-2.4
3,686,147	-		CCNA_03529	0.55	-3.0
3,686,147	-		CCNA_03529	0.55	-1.9
3,686,161	+		CCNA_03529	0.57	+0.7
3,686,169	+		CCNA_03529	0.58	-0.7
3,686,169	+		CCNA_03529	0.58	-1.2
3,686,172	-		CCNA_03529	0.58	-0.1
3,686,174	+		CCNA_03529	0.59	+1.1
3,686,183	+		CCNA_03529	0.60	-1.3
3,686,191	-		CCNA_03529	0.61	-1.3
3,686,191	-		CCNA_03529	0.61	-1.4
3,686,225	-		CCNA_03529	0.65	-0.6
3,686,239	-		CCNA_03529	0.67	-0.6
3,686,274	-		CCNA_03529	0.72	-2.4
3,686,324	-		CCNA_03529	0.78	-1.3
3,686,335	-		CCNA_03529	0.80	-1.0
3,686,342	+		CCNA_03529	0.81	-1.3
3,686,342	+		CCNA_03529	0.81	-1.7
3,686,357	+		CCNA_03529	0.83	+0.5
3,686,384	-		CCNA_03529	0.86	-0.2
3,686,405	+		CCNA_03529	0.89	+0.3
3,686,412	+		CCNA_03529	0.90	-0.0
3,686,413	-				-1.1
3,686,413	-				-1.1
3,686,413	-				-0.7
3,686,413	-				+0.0
3,686,420	-				+0.3
3,686,420	-				+0.1
3,686,422	+				-0.7
3,686,423	+				+1.1
3,686,430	-				-0.9
3,686,431	-				-2.8
3,686,446	-				-0.5
3,686,512	+				+0.2
3,686,512	+				+1.6
3,686,512	+				+0.9
3,686,512	+				+0.5
3,686,517	+				-0.2
3,686,520	-				-0.9
3,686,520	-				-1.3
3,686,531	+				+0.9
3,686,539	-				+0.1
3,686,539	-				+0.2
3,686,539	-				+1.6
3,686,555	+				-1.0
3,686,563	-				+0.4
3,686,565	+				-1.4
3,686,723	-		CCNA_03530	0.36	+0.5
3,686,723	-		CCNA_03530	0.36	+0.5
3,686,811	-		CCNA_03530	0.59	+0.8
3,686,824	+		CCNA_03530	0.62	-0.1
3,686,824	-		CCNA_03530	0.62	-0.2
3,686,824	-		CCNA_03530	0.62	-0.5
3,686,831	+		CCNA_03530	0.64	-0.7
3,686,863	-		CCNA_03530	0.73	+0.1
3,686,892	+		CCNA_03530	0.80	-1.8
3,686,950	+				+0.3
3,686,963	+				+0.0
3,686,973	+				-2.5
3,686,973	+				-1.3
3,686,973	+				-2.3
3,686,973	+				-1.0
3,686,988	+				-2.4
3,686,988	+				+0.6
3,686,996	-				+0.1
3,686,996	-				-0.3
3,687,022	-				-0.4
3,687,022	-				+0.3
3,687,022	-				+0.5
3,687,043	+				-0.8
3,687,043	+				-0.7
3,687,060	-				+0.6
3,687,065	-				-0.1
3,687,067	-				-0.6
3,687,136	+				+0.3
3,687,136	+				-2.8
3,687,136	+				+1.3
3,687,144	-				+0.4
3,687,144	-				-0.1
3,687,144	-				-0.6
3,687,144	-				+0.7
3,687,144	-				-0.6
3,687,144	-				+0.7
3,687,144	-				+1.7
3,687,144	-				-0.2
3,687,217	+		CCNA_03531	0.12	+0.6
3,687,231	+		CCNA_03531	0.13	+0.3
3,687,231	+		CCNA_03531	0.13	-2.0
3,687,251	+		CCNA_03531	0.15	+0.3
3,687,251	+				-0.3
3,687,259	-		CCNA_03531	0.15	-0.7
3,687,259	-		CCNA_03531	0.15	+0.1
3,687,259	-		CCNA_03531	0.15	-0.1
3,687,315	-		CCNA_03531	0.19	-0.2
3,687,337	-		CCNA_03531	0.20	-0.1
3,687,348	-		CCNA_03531	0.21	-1.0
3,687,356	-		CCNA_03531	0.21	+0.5
3,687,459	+		CCNA_03531	0.28	+0.5
3,687,476	-		CCNA_03531	0.29	-1.7
3,687,501	-		CCNA_03531	0.31	-0.7
3,687,571	+		CCNA_03531	0.36	-0.1
3,687,577	+		CCNA_03531	0.36	-1.0
3,687,638	+		CCNA_03531	0.40	-3.0
3,687,657	+		CCNA_03531	0.41	-1.3
3,687,657	+		CCNA_03531	0.41	-2.9
3,687,676	+		CCNA_03531	0.43	-1.3
3,687,694	-		CCNA_03531	0.44	-0.9
3,687,694	-		CCNA_03531	0.44	-1.9
3,687,721	-		CCNA_03531	0.46	-0.3
3,687,770	+		CCNA_03531	0.49	-1.3
3,687,778	-		CCNA_03531	0.49	-0.5
3,687,797	+		CCNA_03531	0.51	-0.6
3,687,802	+		CCNA_03531	0.51	+0.1
3,687,805	-		CCNA_03531	0.51	+0.6
3,687,810	-		CCNA_03531	0.51	-0.6
3,687,810	-		CCNA_03531	0.51	+0.5
3,687,817	+		CCNA_03531	0.52	-2.6
3,687,851	-		CCNA_03531	0.54	+1.3
3,687,851	-		CCNA_03531	0.54	+0.6
3,687,853	+		CCNA_03531	0.54	+0.1
3,687,863	+		CCNA_03531	0.55	-1.5
3,687,863	+		CCNA_03531	0.55	-2.9
3,687,868	+		CCNA_03531	0.55	-3.7
3,687,871	-		CCNA_03531	0.55	-1.2
3,687,871	-		CCNA_03531	0.55	+2.5
3,687,871	-		CCNA_03531	0.55	+0.2
3,687,871	-		CCNA_03531	0.55	-0.5
3,687,924	-		CCNA_03531	0.59	-2.5
3,687,938	+		CCNA_03531	0.60	-0.7
3,687,938	+		CCNA_03531	0.60	-1.7
3,687,946	-		CCNA_03531	0.60	-1.7
3,687,946	-		CCNA_03531	0.60	-0.9
3,687,946	-		CCNA_03531	0.60	-1.1
3,687,946	-		CCNA_03531	0.60	-0.4
3,688,045	-		CCNA_03531	0.67	-1.7
3,688,062	-		CCNA_03531	0.68	+1.7
3,688,069	+		CCNA_03531	0.69	-1.5
3,688,078	+		CCNA_03531	0.69	-1.3
3,688,113	-		CCNA_03531	0.71	-1.3
3,688,121	-		CCNA_03531	0.72	-0.6
3,688,141	-		CCNA_03531	0.73	-0.7
3,688,180	+		CCNA_03531	0.76	-0.0
3,688,180	+		CCNA_03531	0.76	-1.2
3,688,245	-		CCNA_03531	0.80	+0.3
3,688,255	+		CCNA_03531	0.81	-1.0
3,688,261	+		CCNA_03531	0.81	+0.6
3,688,261	+		CCNA_03531	0.81	-0.5
3,688,269	-		CCNA_03531	0.82	-0.3
3,688,271	+		CCNA_03531	0.82	-1.1
3,688,271	+		CCNA_03531	0.82	-0.2
3,688,278	-		CCNA_03531	0.82	-3.3
3,688,279	-		CCNA_03531	0.82	-1.3
3,688,279	-		CCNA_03531	0.82	-1.1
3,688,289	-		CCNA_03531	0.83	-0.4
3,688,292	+		CCNA_03531	0.83	-2.0
3,688,299	-		CCNA_03531	0.84	+0.2
3,688,330	-		CCNA_03531	0.86	-0.7
3,688,337	+		CCNA_03531	0.86	-0.3
3,688,342	+		CCNA_03531	0.87	-2.1
3,688,342	+		CCNA_03531	0.87	-1.3
3,688,345	-		CCNA_03531	0.87	+1.6
3,688,345	-		CCNA_03531	0.87	-0.6
3,688,350	-		CCNA_03531	0.87	-2.4
3,688,350	-		CCNA_03531	0.87	-1.0
3,688,350	-		CCNA_03531	0.87	+0.1
3,688,407	+				-1.1
3,688,441	-				+0.9
3,688,444	+				-0.9
3,688,445	+				-0.9
3,688,445	+				+0.6
3,688,445	+				-1.3
3,688,445	+				+0.0
3,688,450	+				-0.5
3,688,453	-				+1.3
3,688,453	-				-0.5
3,688,453	-				-1.0
3,688,468	-				-3.1
3,688,470	+				-1.0
3,688,480	+				-0.6
3,688,482	-				-2.7
3,688,488	-				+1.0
3,688,524	-				-1.3
3,688,539	+				-1.8
3,688,551	+				+0.3
3,688,553	+				-1.4
3,688,553	+				-0.1
3,688,696	-				+1.3
3,688,707	+				-0.3
3,688,707	+				-0.1
3,688,707	+				-0.9
3,688,708	-				-0.1
3,688,726	+				-0.0
3,688,769	+				-0.4
3,688,777	-				-1.8
3,688,784	+				-1.0
3,688,794	+				-0.7
3,688,797	-				-1.9
3,688,797	-				-0.6
3,688,845	+		CCNA_03532	0.11	-0.3
3,688,861	-		CCNA_03532	0.12	-2.5
3,688,891	+		CCNA_03532	0.14	-0.7
3,688,891	+		CCNA_03532	0.14	+0.0
3,688,937	+		CCNA_03532	0.17	-0.2
3,688,980	+		CCNA_03532	0.19	+0.4
3,688,980	+				+1.3
3,688,990	+		CCNA_03532	0.20	-2.4
3,688,998	-				+1.1
3,689,002	+		CCNA_03532	0.20	+1.3
3,689,008	+		CCNA_03532	0.21	+0.1
3,689,016	-		CCNA_03532	0.21	-0.8
3,689,047	-		CCNA_03532	0.23	-2.7
3,689,066	-		CCNA_03532	0.24	-2.0
3,689,068	+		CCNA_03532	0.24	+0.3
3,689,068	+		CCNA_03532	0.24	+1.0
3,689,076	-		CCNA_03532	0.25	+1.3
3,689,098	+		CCNA_03532	0.26	-0.1
3,689,098	+		CCNA_03532	0.26	-1.3
3,689,106	-		CCNA_03532	0.26	-1.4
3,689,106	-		CCNA_03532	0.26	+1.3
3,689,142	+		CCNA_03532	0.28	-3.5
3,689,150	-		CCNA_03532	0.29	-0.4
3,689,152	+		CCNA_03532	0.29	-1.3
3,689,152	+		CCNA_03532	0.29	-0.2
3,689,152	+		CCNA_03532	0.29	+0.1
3,689,152	+		CCNA_03532	0.29	-1.9
3,689,160	-		CCNA_03532	0.29	-1.5
3,689,160	-		CCNA_03532	0.29	-0.7
3,689,222	+		CCNA_03532	0.33	+0.1
3,689,222	+		CCNA_03532	0.33	-0.1
3,689,230	-		CCNA_03532	0.33	-3.5
3,689,230	-		CCNA_03532	0.33	-2.2
3,689,245	+		CCNA_03532	0.34	+0.1
3,689,245	+		CCNA_03532	0.34	-0.6
3,689,279	+		CCNA_03532	0.36	+0.0
3,689,287	-		CCNA_03532	0.37	-2.8
3,689,287	-		CCNA_03532	0.37	-0.8
3,689,287	-		CCNA_03532	0.37	-2.0
3,689,287	-		CCNA_03532	0.37	-0.1
3,689,287	-		CCNA_03532	0.37	-0.4
3,689,287	-		CCNA_03532	0.37	-1.2
3,689,292	-		CCNA_03532	0.37	+0.5
3,689,306	+		CCNA_03532	0.38	+1.4
3,689,307	-		CCNA_03532	0.38	-2.0
3,689,323	-		CCNA_03532	0.39	-0.9
3,689,369	+		CCNA_03532	0.41	+0.7
3,689,369	+		CCNA_03532	0.41	+0.3
3,689,395	+		CCNA_03532	0.43	-0.5
3,689,444	+		CCNA_03532	0.46	+2.5
3,689,444	+		CCNA_03532	0.46	-0.4
3,689,453	+		CCNA_03532	0.46	+0.8
3,689,461	-		CCNA_03532	0.47	-1.3
3,689,466	-		CCNA_03532	0.47	-0.9
3,689,481	+		CCNA_03532	0.48	+0.5
3,689,489	-		CCNA_03532	0.48	-1.6
3,689,531	-		CCNA_03532	0.51	-0.5