Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS19905

Experiment: R2A with Neomycin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Neomycin 0.004 mg/ml
4,928,791	-		CA265_RS19900	0.27	-0.7
4,928,842	-		CA265_RS19900	0.32	-0.3
4,928,858	-		CA265_RS19900	0.34	-2.0
4,928,881	+		CA265_RS19900	0.37	-0.4
4,928,882	-		CA265_RS19900	0.37	+0.2
4,928,977	+		CA265_RS19900	0.47	+0.5
4,928,979	+		CA265_RS19900	0.47	+1.9
4,928,982	+		CA265_RS19900	0.47	+0.3
4,929,007	+		CA265_RS19900	0.50	+0.7
4,929,009	+		CA265_RS19900	0.50	+1.0
4,929,009	+		CA265_RS19900	0.50	-0.1
4,929,010	-		CA265_RS19900	0.50	+1.4
4,929,016	+		CA265_RS19900	0.51	+0.4
4,929,151	+		CA265_RS19900	0.65	+0.3
4,929,153	+		CA265_RS19900	0.65	-1.1
4,929,213	+		CA265_RS19900	0.71	+0.8
4,929,213	+		CA265_RS19900	0.71	+0.2
4,929,304	-		CA265_RS19900	0.81	+1.4
4,929,511	-				-0.3
4,929,524	+				+0.6
4,929,531	-				+0.5
4,929,531	-				+0.5
4,929,532	+				+1.5
4,929,564	-				+0.4
4,929,565	+				-0.4
4,929,566	-				+0.2
4,929,588	-				-0.6
4,929,588	-				+0.3
4,929,695	+				+0.0
4,929,696	-				+0.6
4,929,696	-				-0.1
4,929,758	-				-0.1
4,929,777	+				+0.0
4,929,809	+				-0.2
4,929,812	+				+0.4
4,929,859	+				+0.4
4,929,860	-				+1.1
4,929,860	-				+0.6
4,929,861	+				-0.7
4,929,861	+				+0.2
4,929,929	-				+0.7
4,929,969	+		CA265_RS19905	0.11	-0.8
4,930,157	-		CA265_RS19905	0.23	+0.3
4,930,206	-		CA265_RS19905	0.26	+0.9
4,930,303	+		CA265_RS19905	0.32	-0.7
4,930,304	-		CA265_RS19905	0.32	+0.8
4,930,350	+		CA265_RS19905	0.35	+0.8
4,930,403	-		CA265_RS19905	0.38	+0.2
4,930,465	+		CA265_RS19905	0.42	+0.7
4,930,466	-		CA265_RS19905	0.42	-1.1
4,930,535	-		CA265_RS19905	0.46	+0.7
4,930,704	+		CA265_RS19905	0.56	+0.7
4,930,781	+		CA265_RS19905	0.61	-0.7
4,930,781	+		CA265_RS19905	0.61	+0.4
4,930,785	+		CA265_RS19905	0.61	-0.2
4,930,847	+		CA265_RS19905	0.65	+0.3
4,930,848	-		CA265_RS19905	0.65	+0.3
4,930,879	-		CA265_RS19905	0.67	+0.3
4,930,879	-		CA265_RS19905	0.67	-1.1
4,930,879	-		CA265_RS19905	0.67	+1.6
4,930,890	+		CA265_RS19905	0.68	+1.6
4,930,914	-		CA265_RS19905	0.69	-0.0
4,931,029	-		CA265_RS19905	0.76	-0.3
4,931,034	+		CA265_RS19905	0.76	-0.5
4,931,123	+		CA265_RS19905	0.82	-0.4
4,931,124	-		CA265_RS19905	0.82	+0.2
4,931,125	+		CA265_RS19905	0.82	-0.4
4,931,125	+		CA265_RS19905	0.82	-0.2
4,931,126	-		CA265_RS19905	0.82	+2.0
4,931,135	-		CA265_RS19905	0.83	+1.0
4,931,288	+				-0.3
4,931,469	+				+1.7
4,931,469	+				+0.1
4,931,559	-		CA265_RS19910	0.17	+0.8
4,931,574	-		CA265_RS19910	0.19	+0.3
4,931,824	+		CA265_RS19910	0.50	-0.5
4,931,855	+		CA265_RS19910	0.54	+0.3
4,931,855	+		CA265_RS19910	0.54	+0.4
4,931,855	+		CA265_RS19910	0.54	+0.4
4,931,856	-		CA265_RS19910	0.54	-0.9
4,932,016	-		CA265_RS19910	0.74	+0.1
4,932,075	-		CA265_RS19910	0.82	-0.0
4,932,190	-				+1.1
4,932,215	+				+0.1
4,932,216	-				+0.6
4,932,221	+				+0.7
4,932,221	+				+0.4
4,932,229	-				+0.1
4,932,284	+		CA265_RS19915	0.21	-0.4
4,932,284	+		CA265_RS19915	0.21	-0.3
4,932,285	-		CA265_RS19915	0.21	-0.2
4,932,296	-		CA265_RS19915	0.25	+0.1
4,932,378	+		CA265_RS19915	0.58	-1.0
4,932,379	-		CA265_RS19915	0.58	-0.4
4,932,396	+		CA265_RS19915	0.65	-0.3
4,932,412	-		CA265_RS19915	0.71	-0.0
4,932,412	-		CA265_RS19915	0.71	-0.0
4,932,412	-		CA265_RS19915	0.71	-0.5