Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS18930

Experiment: R2A with Neomycin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Neomycin 0.004 mg/ml
4,702,741	-		CA265_RS18925	0.25	+0.3
4,702,819	+		CA265_RS18925	0.31	+0.1
4,702,820	-		CA265_RS18925	0.31	-1.1
4,702,838	+		CA265_RS18925	0.33	+0.0
4,702,847	-		CA265_RS18925	0.33	+0.8
4,702,889	+		CA265_RS18925	0.37	+0.4
4,702,937	+		CA265_RS18925	0.41	+0.7
4,702,939	+		CA265_RS18925	0.41	+0.1
4,702,940	-		CA265_RS18925	0.41	-0.7
4,702,942	+		CA265_RS18925	0.41	+0.8
4,702,943	-		CA265_RS18925	0.41	+0.4
4,702,996	+		CA265_RS18925	0.46	+0.3
4,702,997	-		CA265_RS18925	0.46	+1.4
4,703,046	-		CA265_RS18925	0.50	-0.2
4,703,085	+		CA265_RS18925	0.53	+1.4
4,703,086	-		CA265_RS18925	0.53	+0.0
4,703,171	+		CA265_RS18925	0.60	+0.1
4,703,258	-		CA265_RS18925	0.68	+0.8
4,703,301	+		CA265_RS18925	0.71	+0.3
4,703,307	-		CA265_RS18925	0.72	+0.8
4,703,309	-		CA265_RS18925	0.72	-0.0
4,703,311	+		CA265_RS18925	0.72	+1.3
4,703,346	+		CA265_RS18925	0.75	+0.2
4,703,460	-		CA265_RS18925	0.84	+0.1
4,703,492	+		CA265_RS18925	0.87	+0.9
4,703,580	+				+0.2
4,703,595	+				-2.7
4,703,628	-				+0.3
4,703,628	-				+0.8
4,703,682	-				-0.8
4,703,686	-				-1.0
4,703,686	-				+0.9
4,703,746	+				-0.3
4,703,756	+				+1.2
4,703,756	+				-0.4
4,703,804	-				-0.1
4,703,828	+				-1.9
4,703,996	-		CA265_RS18930	0.24	-0.5
4,704,030	-		CA265_RS18930	0.27	+0.3
4,704,039	-		CA265_RS18930	0.28	+0.3
4,704,202	+		CA265_RS18930	0.43	-1.3
4,704,203	-		CA265_RS18930	0.43	+0.2
4,704,206	+		CA265_RS18930	0.43	+0.2
4,704,251	-		CA265_RS18930	0.47	+0.3
4,704,251	-		CA265_RS18930	0.47	+1.1
4,704,260	-		CA265_RS18930	0.48	+0.9
4,704,294	-		CA265_RS18930	0.51	-0.4
4,704,296	+		CA265_RS18930	0.51	-1.1
4,704,296	+		CA265_RS18930	0.51	-1.0
4,704,327	+		CA265_RS18930	0.54	+0.4
4,704,327	+		CA265_RS18930	0.54	-1.3
4,704,328	-		CA265_RS18930	0.54	-2.0
4,704,416	+		CA265_RS18930	0.62	-0.7
4,704,426	-		CA265_RS18930	0.63	-0.7
4,704,463	+		CA265_RS18930	0.67	-1.0
4,704,464	-		CA265_RS18930	0.67	-0.2
4,704,479	+		CA265_RS18930	0.68	-1.0
4,704,480	-		CA265_RS18930	0.68	+0.9
4,704,545	+		CA265_RS18930	0.74	+0.9
4,704,582	+		CA265_RS18930	0.77	-0.3
4,704,583	-		CA265_RS18930	0.78	-0.5
4,704,583	-		CA265_RS18930	0.78	+0.8
4,704,620	-		CA265_RS18930	0.81	-0.2
4,704,629	-		CA265_RS18930	0.82	-1.1
4,704,741	-				-0.1
4,704,743	-				-0.0
4,704,802	+				-0.1
4,704,826	-				-1.1
4,704,878	-				+0.7
4,704,878	-				-0.2
4,704,955	+				+0.1
4,705,722	+				-0.9