Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS11935

Experiment: D-Glucose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR86_RS11930 and ABZR86_RS11935 overlap by 1 nucleotidesABZR86_RS11935 and ABZR86_RS11940 are separated by 106 nucleotides ABZR86_RS11930: ABZR86_RS11930 - MFS transporter, at 2,673,908 to 2,675,212 _RS11930 ABZR86_RS11935: ABZR86_RS11935 - D-lactate dehydrogenase, at 2,675,212 to 2,676,924 _RS11935 ABZR86_RS11940: ABZR86_RS11940 - Xaa-Pro dipeptidase, at 2,677,031 to 2,678,353 _RS11940 Position (kb) 2675 2676 2677Strain fitness (log2 ratio) -2 -1 0 1at 2674.247 kb on + strand, within ABZR86_RS11930at 2674.247 kb on + strand, within ABZR86_RS11930at 2674.248 kb on - strand, within ABZR86_RS11930at 2674.248 kb on - strand, within ABZR86_RS11930at 2674.248 kb on - strand, within ABZR86_RS11930at 2674.248 kb on - strand, within ABZR86_RS11930at 2674.248 kb on - strand, within ABZR86_RS11930at 2674.308 kb on - strand, within ABZR86_RS11930at 2674.316 kb on + strand, within ABZR86_RS11930at 2674.316 kb on + strand, within ABZR86_RS11930at 2674.316 kb on + strand, within ABZR86_RS11930at 2674.317 kb on - strand, within ABZR86_RS11930at 2674.317 kb on - strand, within ABZR86_RS11930at 2674.317 kb on - strand, within ABZR86_RS11930at 2674.323 kb on - strand, within ABZR86_RS11930at 2674.667 kb on + strand, within ABZR86_RS11930at 2674.667 kb on + strand, within ABZR86_RS11930at 2674.667 kb on + strand, within ABZR86_RS11930at 2674.668 kb on - strand, within ABZR86_RS11930at 2674.706 kb on + strand, within ABZR86_RS11930at 2674.778 kb on + strand, within ABZR86_RS11930at 2674.831 kb on + strand, within ABZR86_RS11930at 2674.887 kb on - strand, within ABZR86_RS11930at 2675.124 kb on + strandat 2675.486 kb on - strand, within ABZR86_RS11935at 2675.721 kb on + strand, within ABZR86_RS11935at 2675.891 kb on - strand, within ABZR86_RS11935at 2676.046 kb on + strand, within ABZR86_RS11935at 2676.047 kb on - strand, within ABZR86_RS11935at 2676.047 kb on - strand, within ABZR86_RS11935at 2676.133 kb on + strand, within ABZR86_RS11935at 2676.133 kb on + strand, within ABZR86_RS11935at 2676.371 kb on - strand, within ABZR86_RS11935at 2676.396 kb on - strand, within ABZR86_RS11935at 2676.463 kb on + strand, within ABZR86_RS11935at 2676.664 kb on + strand, within ABZR86_RS11935at 2676.664 kb on + strand, within ABZR86_RS11935at 2676.665 kb on - strand, within ABZR86_RS11935at 2676.665 kb on - strand, within ABZR86_RS11935at 2676.667 kb on + strand, within ABZR86_RS11935at 2676.703 kb on + strand, within ABZR86_RS11935at 2676.704 kb on - strand, within ABZR86_RS11935at 2676.704 kb on - strand, within ABZR86_RS11935at 2676.841 kb on + strandat 2676.841 kb on + strandat 2676.842 kb on - strandat 2676.907 kb on + strandat 2676.907 kb on + strandat 2676.908 kb on - strandat 2677.055 kb on + strandat 2677.250 kb on - strand, within ABZR86_RS11940at 2677.250 kb on - strand, within ABZR86_RS11940at 2677.503 kb on - strand, within ABZR86_RS11940at 2677.503 kb on - strand, within ABZR86_RS11940at 2677.514 kb on + strand, within ABZR86_RS11940at 2677.622 kb on + strand, within ABZR86_RS11940at 2677.622 kb on + strand, within ABZR86_RS11940at 2677.622 kb on + strand, within ABZR86_RS11940at 2677.623 kb on - strand, within ABZR86_RS11940at 2677.661 kb on + strand, within ABZR86_RS11940at 2677.706 kb on + strand, within ABZR86_RS11940at 2677.737 kb on - strand, within ABZR86_RS11940at 2677.737 kb on - strand, within ABZR86_RS11940at 2677.805 kb on + strand, within ABZR86_RS11940at 2677.805 kb on + strand, within ABZR86_RS11940at 2677.805 kb on + strand, within ABZR86_RS11940at 2677.805 kb on + strand, within ABZR86_RS11940at 2677.805 kb on + strand, within ABZR86_RS11940at 2677.805 kb on + strand, within ABZR86_RS11940at 2677.806 kb on - strand, within ABZR86_RS11940at 2677.806 kb on - strand, within ABZR86_RS11940at 2677.806 kb on - strand, within ABZR86_RS11940at 2677.902 kb on - strand, within ABZR86_RS11940

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose (C)
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2,674,247 + ABZR86_RS11930 0.26 +0.0
2,674,247 + ABZR86_RS11930 0.26 +1.0
2,674,248 - ABZR86_RS11930 0.26 +0.5
2,674,248 - ABZR86_RS11930 0.26 -0.1
2,674,248 - ABZR86_RS11930 0.26 -0.1
2,674,248 - ABZR86_RS11930 0.26 +0.2
2,674,248 - ABZR86_RS11930 0.26 +0.2
2,674,308 - ABZR86_RS11930 0.31 +0.3
2,674,316 + ABZR86_RS11930 0.31 +0.3
2,674,316 + ABZR86_RS11930 0.31 -0.1
2,674,316 + ABZR86_RS11930 0.31 +0.3
2,674,317 - ABZR86_RS11930 0.31 -0.8
2,674,317 - ABZR86_RS11930 0.31 -0.6
2,674,317 - ABZR86_RS11930 0.31 -0.3
2,674,323 - ABZR86_RS11930 0.32 +0.2
2,674,667 + ABZR86_RS11930 0.58 -0.5
2,674,667 + ABZR86_RS11930 0.58 -1.4
2,674,667 + ABZR86_RS11930 0.58 +0.4
2,674,668 - ABZR86_RS11930 0.58 -0.1
2,674,706 + ABZR86_RS11930 0.61 -0.2
2,674,778 + ABZR86_RS11930 0.67 +1.0
2,674,831 + ABZR86_RS11930 0.71 +0.4
2,674,887 - ABZR86_RS11930 0.75 -0.2
2,675,124 + -0.4
2,675,486 - ABZR86_RS11935 0.16 -0.3
2,675,721 + ABZR86_RS11935 0.30 +0.5
2,675,891 - ABZR86_RS11935 0.40 -0.2
2,676,046 + ABZR86_RS11935 0.49 +0.7
2,676,047 - ABZR86_RS11935 0.49 +0.4
2,676,047 - ABZR86_RS11935 0.49 +0.3
2,676,133 + ABZR86_RS11935 0.54 +1.0
2,676,133 + ABZR86_RS11935 0.54 -0.1
2,676,371 - ABZR86_RS11935 0.68 -0.7
2,676,396 - ABZR86_RS11935 0.69 -0.9
2,676,463 + ABZR86_RS11935 0.73 +0.8
2,676,664 + ABZR86_RS11935 0.85 -0.4
2,676,664 + ABZR86_RS11935 0.85 +0.2
2,676,665 - ABZR86_RS11935 0.85 +0.2
2,676,665 - ABZR86_RS11935 0.85 -0.4
2,676,667 + ABZR86_RS11935 0.85 -0.8
2,676,703 + ABZR86_RS11935 0.87 -0.1
2,676,704 - ABZR86_RS11935 0.87 -1.4
2,676,704 - ABZR86_RS11935 0.87 -0.6
2,676,841 + +0.1
2,676,841 + -0.3
2,676,842 - -0.2
2,676,907 + -0.1
2,676,907 + -0.1
2,676,908 - +1.5
2,677,055 + -0.1
2,677,250 - ABZR86_RS11940 0.17 +0.5
2,677,250 - ABZR86_RS11940 0.17 -0.2
2,677,503 - ABZR86_RS11940 0.36 -1.1
2,677,503 - ABZR86_RS11940 0.36 -1.5
2,677,514 + ABZR86_RS11940 0.37 -0.3
2,677,622 + ABZR86_RS11940 0.45 -0.5
2,677,622 + ABZR86_RS11940 0.45 -0.5
2,677,622 + ABZR86_RS11940 0.45 +0.3
2,677,623 - ABZR86_RS11940 0.45 +0.0
2,677,661 + ABZR86_RS11940 0.48 +0.0
2,677,706 + ABZR86_RS11940 0.51 +0.7
2,677,737 - ABZR86_RS11940 0.53 +0.1
2,677,737 - ABZR86_RS11940 0.53 -0.7
2,677,805 + ABZR86_RS11940 0.59 -0.7
2,677,805 + ABZR86_RS11940 0.59 -1.1
2,677,805 + ABZR86_RS11940 0.59 +0.2
2,677,805 + ABZR86_RS11940 0.59 -2.0
2,677,805 + ABZR86_RS11940 0.59 +0.0
2,677,805 + ABZR86_RS11940 0.59 -0.2
2,677,806 - ABZR86_RS11940 0.59 +0.1
2,677,806 - ABZR86_RS11940 0.59 -0.1
2,677,806 - ABZR86_RS11940 0.59 +0.3
2,677,902 - ABZR86_RS11940 0.66 -0.5

Or see this region's nucleotide sequence