Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS10550 and ABZR86_RS10555 are separated by 0 nucleotides ABZR86_RS10555 and ABZR86_RS10560 are separated by 194 nucleotides
ABZR86_RS10550: ABZR86_RS10550 - ATP-binding protein, at 2,344,882 to 2,346,264
_RS10550
ABZR86_RS10555: ABZR86_RS10555 - hypothetical protein, at 2,346,265 to 2,346,579
_RS10555
ABZR86_RS10560: ABZR86_RS10560 - sigma-54 dependent transcriptional regulator, at 2,346,774 to 2,348,117
_RS10560
Position (kb)
2346
2347 Strain fitness (log2 ratio)
-2
-1
0
1 at 2345.333 kb on + strand, within ABZR86_RS10550 at 2345.334 kb on - strand, within ABZR86_RS10550 at 2345.772 kb on - strand, within ABZR86_RS10550 at 2345.772 kb on - strand, within ABZR86_RS10550 at 2345.772 kb on - strand, within ABZR86_RS10550 at 2346.025 kb on + strand, within ABZR86_RS10550 at 2346.025 kb on + strand, within ABZR86_RS10550 at 2346.025 kb on + strand, within ABZR86_RS10550 at 2346.026 kb on - strand, within ABZR86_RS10550 at 2346.185 kb on + strand at 2346.185 kb on + strand at 2346.185 kb on + strand at 2346.185 kb on + strand at 2346.186 kb on - strand at 2346.186 kb on - strand at 2346.186 kb on - strand at 2346.206 kb on + strand at 2346.206 kb on + strand at 2346.206 kb on + strand at 2346.206 kb on + strand at 2346.207 kb on - strand at 2346.207 kb on - strand at 2346.459 kb on - strand, within ABZR86_RS10555 at 2346.618 kb on + strand at 2346.618 kb on + strand at 2346.649 kb on - strand at 2346.649 kb on - strand at 2346.649 kb on - strand at 2346.668 kb on - strand at 2346.668 kb on - strand at 2346.668 kb on - strand at 2346.668 kb on - strand at 2346.668 kb on - strand at 2346.755 kb on + strand at 2346.755 kb on + strand at 2346.756 kb on - strand at 2346.800 kb on - strand at 2346.817 kb on + strand at 2347.105 kb on + strand, within ABZR86_RS10560 at 2347.180 kb on + strand, within ABZR86_RS10560 at 2347.184 kb on - strand, within ABZR86_RS10560 at 2347.254 kb on + strand, within ABZR86_RS10560 at 2347.254 kb on + strand, within ABZR86_RS10560 at 2347.254 kb on + strand, within ABZR86_RS10560 at 2347.255 kb on - strand, within ABZR86_RS10560 at 2347.255 kb on - strand, within ABZR86_RS10560 at 2347.427 kb on - strand, within ABZR86_RS10560
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 2,345,333 + ABZR86_RS10550 0.33 +0.1 2,345,334 - ABZR86_RS10550 0.33 +0.5 2,345,772 - ABZR86_RS10550 0.64 -0.7 2,345,772 - ABZR86_RS10550 0.64 -0.5 2,345,772 - ABZR86_RS10550 0.64 -0.4 2,346,025 + ABZR86_RS10550 0.83 +0.7 2,346,025 + ABZR86_RS10550 0.83 +0.1 2,346,025 + ABZR86_RS10550 0.83 +0.5 2,346,026 - ABZR86_RS10550 0.83 +0.1 2,346,185 + +0.5 2,346,185 + -0.2 2,346,185 + +0.1 2,346,185 + -0.0 2,346,186 - -0.4 2,346,186 - -0.6 2,346,186 - +0.6 2,346,206 + -0.3 2,346,206 + +0.6 2,346,206 + -0.4 2,346,206 + +0.1 2,346,207 - -0.1 2,346,207 - -0.7 2,346,459 - ABZR86_RS10555 0.62 -0.0 2,346,618 + -0.3 2,346,618 + +1.5 2,346,649 - +0.4 2,346,649 - +0.4 2,346,649 - -1.4 2,346,668 - +0.0 2,346,668 - +0.3 2,346,668 - -0.7 2,346,668 - -1.9 2,346,668 - -0.2 2,346,755 + -0.1 2,346,755 + +1.5 2,346,756 - -0.1 2,346,800 - -0.2 2,346,817 + +0.0 2,347,105 + ABZR86_RS10560 0.25 +0.3 2,347,180 + ABZR86_RS10560 0.30 -0.4 2,347,184 - ABZR86_RS10560 0.31 -0.5 2,347,254 + ABZR86_RS10560 0.36 -0.3 2,347,254 + ABZR86_RS10560 0.36 +0.2 2,347,254 + ABZR86_RS10560 0.36 +0.3 2,347,255 - ABZR86_RS10560 0.36 +0.1 2,347,255 - ABZR86_RS10560 0.36 +0.6 2,347,427 - ABZR86_RS10560 0.49 -0.4
Or see this region's nucleotide sequence