Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS08875

Experiment: D-Glucose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR86_RS08865 and ABZR86_RS08870 are separated by 14 nucleotidesABZR86_RS08870 and ABZR86_RS08875 are separated by 303 nucleotidesABZR86_RS08875 and ABZR86_RS08880 are separated by 165 nucleotides ABZR86_RS08865: ABZR86_RS08865 - 30S ribosomal protein S18, at 1,981,125 to 1,981,355 _RS08865 ABZR86_RS08870: ABZR86_RS08870 - 30S ribosomal protein S6, at 1,981,370 to 1,981,810 _RS08870 ABZR86_RS08875: ABZR86_RS08875 - iron-sulfur cluster assembly accessory protein, at 1,982,114 to 1,982,440 _RS08875 ABZR86_RS08880: ABZR86_RS08880 - asparagine--tRNA ligase, at 1,982,606 to 1,984,006 _RS08880 Position (kb) 1982 1983Strain fitness (log2 ratio) -1 0 1at 1981.147 kb on + strandat 1981.147 kb on + strandat 1981.147 kb on + strandat 1981.148 kb on - strand, within ABZR86_RS08865at 1981.924 kb on - strandat 1982.110 kb on + strandat 1982.110 kb on + strandat 1982.110 kb on + strandat 1982.110 kb on + strandat 1982.110 kb on + strandat 1982.110 kb on + strandat 1982.110 kb on + strandat 1982.110 kb on + strandat 1982.110 kb on + strandat 1982.112 kb on + strandat 1982.113 kb on - strandat 1982.113 kb on - strandat 1982.440 kb on + strandat 1982.440 kb on + strandat 1982.440 kb on + strandat 1982.495 kb on + strandat 1982.495 kb on + strandat 1982.495 kb on + strandat 1982.496 kb on - strandat 1982.496 kb on - strandat 1982.500 kb on + strandat 1982.500 kb on + strandat 1982.500 kb on + strandat 1982.500 kb on + strandat 1982.500 kb on + strandat 1982.500 kb on + strandat 1982.500 kb on + strandat 1982.501 kb on - strandat 1982.501 kb on - strandat 1982.501 kb on - strandat 1982.501 kb on - strandat 1982.501 kb on - strandat 1982.501 kb on - strandat 1982.556 kb on + strandat 1982.557 kb on - strandat 1982.557 kb on - strandat 1982.557 kb on - strandat 1982.557 kb on - strandat 1982.558 kb on + strandat 1982.558 kb on + strandat 1982.565 kb on + strandat 1982.565 kb on + strandat 1982.565 kb on + strandat 1982.565 kb on + strandat 1982.565 kb on + strandat 1982.565 kb on + strandat 1982.565 kb on + strandat 1982.565 kb on + strandat 1982.565 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose (C)
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1,981,147 + +0.2
1,981,147 + +0.8
1,981,147 + -0.3
1,981,148 - ABZR86_RS08865 0.10 +1.7
1,981,924 - +0.4
1,982,110 + -1.2
1,982,110 + +0.3
1,982,110 + +0.2
1,982,110 + -0.4
1,982,110 + -0.2
1,982,110 + +0.6
1,982,110 + -0.3
1,982,110 + -0.5
1,982,110 + -0.2
1,982,112 + -0.5
1,982,113 - +1.4
1,982,113 - -1.5
1,982,440 + -0.6
1,982,440 + -0.2
1,982,440 + -0.1
1,982,495 + -0.5
1,982,495 + -0.2
1,982,495 + +0.4
1,982,496 - +0.4
1,982,496 - -0.4
1,982,500 + +0.2
1,982,500 + -0.0
1,982,500 + -0.6
1,982,500 + +0.4
1,982,500 + +0.3
1,982,500 + -0.6
1,982,500 + +0.3
1,982,501 - -0.5
1,982,501 - -0.5
1,982,501 - +0.1
1,982,501 - -0.5
1,982,501 - +0.1
1,982,501 - +0.2
1,982,556 + +0.5
1,982,557 - +0.3
1,982,557 - +0.5
1,982,557 - +0.8
1,982,557 - -0.4
1,982,558 + -0.9
1,982,558 + +0.1
1,982,565 + -0.4
1,982,565 + +0.5
1,982,565 + -0.3
1,982,565 + -0.2
1,982,565 + +0.4
1,982,565 + -0.5
1,982,565 + -0.3
1,982,565 + +0.2
1,982,565 + +0.1

Or see this region's nucleotide sequence