Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS07370 and ABZR86_RS07375 are separated by 18 nucleotides ABZR86_RS07375 and ABZR86_RS07380 are separated by 74 nucleotides ABZR86_RS07380 and ABZR86_RS07385 are separated by 135 nucleotides
ABZR86_RS07370: ABZR86_RS07370 - DUF899 family protein, at 1,620,336 to 1,620,929
_RS07370
ABZR86_RS07375: ABZR86_RS07375 - DUF899 family protein, at 1,620,948 to 1,621,643
_RS07375
ABZR86_RS07380: ABZR86_RS07380 - metalloregulator ArsR/SmtB family transcription factor, at 1,621,718 to 1,622,161
_RS07380
ABZR86_RS07385: ABZR86_RS07385 - autotransporter-associated beta strand repeat-containing protein, at 1,622,297 to 1,628,095
_RS07385
Position (kb)
1621
1622
1623 Strain fitness (log2 ratio)
-1
0
1 at 1620.814 kb on + strand, within ABZR86_RS07370 at 1620.814 kb on + strand, within ABZR86_RS07370 at 1620.814 kb on + strand, within ABZR86_RS07370 at 1620.892 kb on + strand at 1620.922 kb on + strand at 1620.922 kb on + strand at 1620.923 kb on - strand at 1620.959 kb on - strand at 1621.037 kb on - strand, within ABZR86_RS07375 at 1621.037 kb on - strand, within ABZR86_RS07375 at 1621.058 kb on + strand, within ABZR86_RS07375 at 1621.058 kb on + strand, within ABZR86_RS07375 at 1621.058 kb on + strand, within ABZR86_RS07375 at 1621.059 kb on - strand, within ABZR86_RS07375 at 1621.059 kb on - strand, within ABZR86_RS07375 at 1621.084 kb on + strand, within ABZR86_RS07375 at 1621.085 kb on - strand, within ABZR86_RS07375 at 1621.085 kb on - strand, within ABZR86_RS07375 at 1621.093 kb on + strand, within ABZR86_RS07375 at 1621.093 kb on + strand, within ABZR86_RS07375 at 1621.138 kb on + strand, within ABZR86_RS07375 at 1621.138 kb on + strand, within ABZR86_RS07375 at 1621.174 kb on + strand, within ABZR86_RS07375 at 1621.174 kb on + strand, within ABZR86_RS07375 at 1621.174 kb on + strand, within ABZR86_RS07375 at 1621.174 kb on + strand, within ABZR86_RS07375 at 1621.174 kb on + strand, within ABZR86_RS07375 at 1621.175 kb on - strand, within ABZR86_RS07375 at 1621.177 kb on + strand, within ABZR86_RS07375 at 1621.178 kb on - strand, within ABZR86_RS07375 at 1621.228 kb on + strand, within ABZR86_RS07375 at 1621.228 kb on + strand, within ABZR86_RS07375 at 1621.229 kb on - strand, within ABZR86_RS07375 at 1621.423 kb on + strand, within ABZR86_RS07375 at 1621.423 kb on + strand, within ABZR86_RS07375 at 1621.424 kb on - strand, within ABZR86_RS07375 at 1621.424 kb on - strand, within ABZR86_RS07375 at 1621.436 kb on - strand, within ABZR86_RS07375 at 1621.436 kb on - strand, within ABZR86_RS07375 at 1621.508 kb on - strand, within ABZR86_RS07375 at 1621.508 kb on - strand, within ABZR86_RS07375 at 1621.840 kb on - strand, within ABZR86_RS07380 at 1621.857 kb on - strand, within ABZR86_RS07380 at 1622.228 kb on - strand at 1622.367 kb on + strand at 1622.368 kb on - strand at 1622.368 kb on - strand at 1622.431 kb on - strand at 1622.598 kb on + strand at 1622.598 kb on + strand at 1622.598 kb on + strand at 1622.599 kb on - strand at 1622.685 kb on + strand at 1622.686 kb on - strand at 1622.692 kb on - strand at 1622.692 kb on - strand at 1622.844 kb on + strand at 1622.892 kb on + strand, within ABZR86_RS07385
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 1,620,814 + ABZR86_RS07370 0.80 +0.9 1,620,814 + ABZR86_RS07370 0.80 +0.1 1,620,814 + ABZR86_RS07370 0.80 +1.7 1,620,892 + +0.6 1,620,922 + -0.6 1,620,922 + +0.3 1,620,923 - +0.2 1,620,959 - +1.7 1,621,037 - ABZR86_RS07375 0.13 -0.1 1,621,037 - ABZR86_RS07375 0.13 +0.4 1,621,058 + ABZR86_RS07375 0.16 +1.1 1,621,058 + ABZR86_RS07375 0.16 -0.4 1,621,058 + ABZR86_RS07375 0.16 -0.3 1,621,059 - ABZR86_RS07375 0.16 +0.2 1,621,059 - ABZR86_RS07375 0.16 +0.3 1,621,084 + ABZR86_RS07375 0.20 +1.3 1,621,085 - ABZR86_RS07375 0.20 +0.7 1,621,085 - ABZR86_RS07375 0.20 +0.4 1,621,093 + ABZR86_RS07375 0.21 +0.4 1,621,093 + ABZR86_RS07375 0.21 -0.3 1,621,138 + ABZR86_RS07375 0.27 -0.5 1,621,138 + ABZR86_RS07375 0.27 -0.6 1,621,174 + ABZR86_RS07375 0.32 -0.1 1,621,174 + ABZR86_RS07375 0.32 -0.7 1,621,174 + ABZR86_RS07375 0.32 -0.0 1,621,174 + ABZR86_RS07375 0.32 +0.7 1,621,174 + ABZR86_RS07375 0.32 +1.3 1,621,175 - ABZR86_RS07375 0.33 -0.6 1,621,177 + ABZR86_RS07375 0.33 +0.0 1,621,178 - ABZR86_RS07375 0.33 -0.4 1,621,228 + ABZR86_RS07375 0.40 -0.1 1,621,228 + ABZR86_RS07375 0.40 +0.6 1,621,229 - ABZR86_RS07375 0.40 +0.7 1,621,423 + ABZR86_RS07375 0.68 +1.2 1,621,423 + ABZR86_RS07375 0.68 -0.8 1,621,424 - ABZR86_RS07375 0.68 +1.2 1,621,424 - ABZR86_RS07375 0.68 -0.3 1,621,436 - ABZR86_RS07375 0.70 -0.7 1,621,436 - ABZR86_RS07375 0.70 -1.0 1,621,508 - ABZR86_RS07375 0.80 -0.1 1,621,508 - ABZR86_RS07375 0.80 -1.0 1,621,840 - ABZR86_RS07380 0.27 +0.5 1,621,857 - ABZR86_RS07380 0.31 +0.4 1,622,228 - -0.2 1,622,367 + -0.4 1,622,368 - +0.2 1,622,368 - +1.0 1,622,431 - -0.3 1,622,598 + +0.3 1,622,598 + +0.2 1,622,598 + +0.3 1,622,599 - +0.1 1,622,685 + -0.8 1,622,686 - +0.2 1,622,692 - +0.1 1,622,692 - -0.2 1,622,844 + +0.2 1,622,892 + ABZR86_RS07385 0.10 +0.9
Or see this region's nucleotide sequence