Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS02960 and ABZR86_RS02965 are separated by 164 nucleotides ABZR86_RS02965 and ABZR86_RS02970 are separated by 214 nucleotides ABZR86_RS02970 and ABZR86_RS02975 are separated by 113 nucleotides ABZR86_RS02975 and ABZR86_RS02980 are separated by 388 nucleotides
ABZR86_RS02960: ABZR86_RS02960 - BON domain-containing protein, at 605,631 to 606,185
_RS02960
ABZR86_RS02965: ABZR86_RS02965 - hypothetical protein, at 606,350 to 606,541
_RS02965
ABZR86_RS02970: ABZR86_RS02970 - PAS domain-containing sensor histidine kinase, at 606,756 to 608,690
_RS02970
ABZR86_RS02975: ABZR86_RS02975 - response regulator, at 608,804 to 609,205
_RS02975
ABZR86_RS02980: ABZR86_RS02980 - DUF3182 family protein, at 609,594 to 610,724
_RS02980
Position (kb) 606
607
608
609 Strain fitness (log2 ratio) -1
0
1 at 606.089 kb on - strand, within ABZR86_RS02960 at 606.089 kb on - strand, within ABZR86_RS02960 at 606.222 kb on + strand at 606.223 kb on - strand at 606.223 kb on - strand at 606.546 kb on + strand at 606.547 kb on - strand at 606.547 kb on - strand at 606.602 kb on + strand at 606.777 kb on - strand at 606.777 kb on - strand at 606.777 kb on - strand at 606.779 kb on - strand at 607.195 kb on + strand, within ABZR86_RS02970 at 607.270 kb on + strand, within ABZR86_RS02970 at 607.270 kb on + strand, within ABZR86_RS02970 at 607.396 kb on + strand, within ABZR86_RS02970 at 607.396 kb on + strand, within ABZR86_RS02970 at 607.396 kb on + strand, within ABZR86_RS02970 at 607.397 kb on - strand, within ABZR86_RS02970 at 607.397 kb on - strand, within ABZR86_RS02970 at 607.397 kb on - strand, within ABZR86_RS02970 at 607.397 kb on - strand, within ABZR86_RS02970 at 607.554 kb on + strand, within ABZR86_RS02970 at 608.401 kb on + strand, within ABZR86_RS02970 at 608.402 kb on - strand, within ABZR86_RS02970 at 608.402 kb on - strand, within ABZR86_RS02970 at 608.485 kb on + strand, within ABZR86_RS02970 at 608.521 kb on + strand at 608.521 kb on + strand at 608.521 kb on + strand at 608.521 kb on + strand at 608.626 kb on + strand at 608.626 kb on + strand at 608.627 kb on - strand at 608.627 kb on - strand at 608.636 kb on - strand at 608.666 kb on - strand at 609.044 kb on + strand, within ABZR86_RS02975 at 609.044 kb on + strand, within ABZR86_RS02975 at 609.044 kb on + strand, within ABZR86_RS02975
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 606,089 - ABZR86_RS02960 0.83 +0.5 606,089 - ABZR86_RS02960 0.83 -1.5 606,222 + -0.5 606,223 - -0.0 606,223 - +0.4 606,546 + +0.7 606,547 - -0.4 606,547 - +0.8 606,602 + -0.0 606,777 - +0.7 606,777 - -0.9 606,777 - -1.7 606,779 - +0.5 607,195 + ABZR86_RS02970 0.23 -0.7 607,270 + ABZR86_RS02970 0.27 -0.0 607,270 + ABZR86_RS02970 0.27 +0.4 607,396 + ABZR86_RS02970 0.33 +0.8 607,396 + ABZR86_RS02970 0.33 -0.4 607,396 + ABZR86_RS02970 0.33 -0.3 607,397 - ABZR86_RS02970 0.33 +0.5 607,397 - ABZR86_RS02970 0.33 -0.6 607,397 - ABZR86_RS02970 0.33 -1.6 607,397 - ABZR86_RS02970 0.33 +0.6 607,554 + ABZR86_RS02970 0.41 +0.3 608,401 + ABZR86_RS02970 0.85 +1.6 608,402 - ABZR86_RS02970 0.85 +0.0 608,402 - ABZR86_RS02970 0.85 +0.3 608,485 + ABZR86_RS02970 0.89 -0.2 608,521 + -0.3 608,521 + +0.5 608,521 + -0.6 608,521 + -0.5 608,626 + +1.1 608,626 + -0.2 608,627 - -0.9 608,627 - +0.0 608,636 - -0.2 608,666 - +0.5 609,044 + ABZR86_RS02975 0.60 +0.2 609,044 + ABZR86_RS02975 0.60 -0.8 609,044 + ABZR86_RS02975 0.60 +0.1
Or see this region's nucleotide sequence