Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS01315 and ABZR86_RS01320 are separated by 13 nucleotides ABZR86_RS01320 and ABZR86_RS01325 are separated by 48 nucleotides ABZR86_RS01325 and ABZR86_RS01330 are separated by 10 nucleotides
ABZR86_RS01315: ABZR86_RS01315 - alpha-hydroxy acid oxidase, at 275,905 to 277,044
_RS01315
ABZR86_RS01320: ABZR86_RS01320 - enolase C-terminal domain-like protein, at 277,058 to 278,386
_RS01320
ABZR86_RS01325: ABZR86_RS01325 - fumarylacetoacetate hydrolase family protein, at 278,435 to 279,301
_RS01325
ABZR86_RS01330: ABZR86_RS01330 - SDR family oxidoreductase, at 279,312 to 280,058
_RS01330
Position (kb) 277
278
279 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 276.653 kb on + strand, within ABZR86_RS01315 at 276.653 kb on + strand, within ABZR86_RS01315 at 276.653 kb on + strand, within ABZR86_RS01315 at 276.969 kb on - strand at 276.969 kb on - strand at 277.113 kb on + strand at 277.173 kb on + strand at 277.812 kb on + strand, within ABZR86_RS01320 at 277.812 kb on + strand, within ABZR86_RS01320 at 277.813 kb on - strand, within ABZR86_RS01320 at 277.821 kb on + strand, within ABZR86_RS01320 at 277.969 kb on + strand, within ABZR86_RS01320 at 277.970 kb on - strand, within ABZR86_RS01320 at 277.971 kb on + strand, within ABZR86_RS01320 at 277.972 kb on - strand, within ABZR86_RS01320 at 277.972 kb on - strand, within ABZR86_RS01320 at 277.972 kb on - strand, within ABZR86_RS01320 at 277.972 kb on - strand, within ABZR86_RS01320 at 278.157 kb on + strand, within ABZR86_RS01320 at 278.157 kb on + strand, within ABZR86_RS01320 at 278.158 kb on - strand, within ABZR86_RS01320 at 278.158 kb on - strand, within ABZR86_RS01320 at 278.158 kb on - strand, within ABZR86_RS01320 at 278.158 kb on - strand, within ABZR86_RS01320 at 278.343 kb on + strand at 278.343 kb on + strand at 278.421 kb on + strand at 278.421 kb on + strand at 278.422 kb on - strand at 278.422 kb on - strand at 278.535 kb on + strand, within ABZR86_RS01325 at 278.535 kb on + strand, within ABZR86_RS01325 at 278.535 kb on + strand, within ABZR86_RS01325 at 278.536 kb on - strand, within ABZR86_RS01325 at 278.536 kb on - strand, within ABZR86_RS01325 at 278.613 kb on + strand, within ABZR86_RS01325 at 278.614 kb on - strand, within ABZR86_RS01325 at 278.623 kb on + strand, within ABZR86_RS01325 at 278.623 kb on + strand, within ABZR86_RS01325 at 278.624 kb on - strand, within ABZR86_RS01325 at 278.625 kb on + strand, within ABZR86_RS01325 at 278.625 kb on + strand, within ABZR86_RS01325 at 278.625 kb on + strand, within ABZR86_RS01325 at 278.626 kb on - strand, within ABZR86_RS01325 at 278.626 kb on - strand, within ABZR86_RS01325 at 278.626 kb on - strand, within ABZR86_RS01325 at 278.626 kb on - strand, within ABZR86_RS01325 at 279.063 kb on + strand, within ABZR86_RS01325 at 279.063 kb on + strand, within ABZR86_RS01325 at 279.064 kb on - strand, within ABZR86_RS01325 at 279.064 kb on - strand, within ABZR86_RS01325 at 279.195 kb on + strand, within ABZR86_RS01325 at 279.195 kb on + strand, within ABZR86_RS01325 at 279.195 kb on + strand, within ABZR86_RS01325 at 279.195 kb on + strand, within ABZR86_RS01325 at 279.195 kb on + strand, within ABZR86_RS01325 at 279.383 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 276,653 + ABZR86_RS01315 0.66 -1.3 276,653 + ABZR86_RS01315 0.66 +0.3 276,653 + ABZR86_RS01315 0.66 +0.1 276,969 - -1.4 276,969 - -0.3 277,113 + +0.6 277,173 + -1.1 277,812 + ABZR86_RS01320 0.57 +0.6 277,812 + ABZR86_RS01320 0.57 -1.1 277,813 - ABZR86_RS01320 0.57 +0.3 277,821 + ABZR86_RS01320 0.57 -0.0 277,969 + ABZR86_RS01320 0.69 +0.8 277,970 - ABZR86_RS01320 0.69 +0.6 277,971 + ABZR86_RS01320 0.69 -0.3 277,972 - ABZR86_RS01320 0.69 +2.1 277,972 - ABZR86_RS01320 0.69 +1.4 277,972 - ABZR86_RS01320 0.69 +0.3 277,972 - ABZR86_RS01320 0.69 -0.2 278,157 + ABZR86_RS01320 0.83 +0.6 278,157 + ABZR86_RS01320 0.83 -0.1 278,158 - ABZR86_RS01320 0.83 +0.3 278,158 - ABZR86_RS01320 0.83 +0.4 278,158 - ABZR86_RS01320 0.83 -1.1 278,158 - ABZR86_RS01320 0.83 +1.3 278,343 + -0.3 278,343 + +0.4 278,421 + -0.3 278,421 + -3.2 278,422 - -0.6 278,422 - +0.2 278,535 + ABZR86_RS01325 0.12 +0.1 278,535 + ABZR86_RS01325 0.12 -0.1 278,535 + ABZR86_RS01325 0.12 +0.0 278,536 - ABZR86_RS01325 0.12 +0.1 278,536 - ABZR86_RS01325 0.12 -0.0 278,613 + ABZR86_RS01325 0.21 +0.1 278,614 - ABZR86_RS01325 0.21 +1.2 278,623 + ABZR86_RS01325 0.22 -0.3 278,623 + ABZR86_RS01325 0.22 +0.8 278,624 - ABZR86_RS01325 0.22 +0.5 278,625 + ABZR86_RS01325 0.22 +0.3 278,625 + ABZR86_RS01325 0.22 -0.8 278,625 + ABZR86_RS01325 0.22 -0.2 278,626 - ABZR86_RS01325 0.22 +0.1 278,626 - ABZR86_RS01325 0.22 -0.1 278,626 - ABZR86_RS01325 0.22 +0.2 278,626 - ABZR86_RS01325 0.22 +0.1 279,063 + ABZR86_RS01325 0.72 -0.5 279,063 + ABZR86_RS01325 0.72 -0.4 279,064 - ABZR86_RS01325 0.73 +0.5 279,064 - ABZR86_RS01325 0.73 +1.0 279,195 + ABZR86_RS01325 0.88 -0.6 279,195 + ABZR86_RS01325 0.88 -0.6 279,195 + ABZR86_RS01325 0.88 +0.3 279,195 + ABZR86_RS01325 0.88 +0.6 279,195 + ABZR86_RS01325 0.88 +0.4 279,383 - +0.7
Or see this region's nucleotide sequence