Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS00910 and ABZR86_RS00915 are separated by 244 nucleotides ABZR86_RS00915 and ABZR86_RS00920 are separated by 98 nucleotides ABZR86_RS00920 and ABZR86_RS00925 are separated by 24 nucleotides ABZR86_RS00925 and ABZR86_RS00930 are separated by 185 nucleotides
ABZR86_RS00910: ABZR86_RS00910 - excinuclease ABC subunit UvrA, at 178,367 to 181,339
_RS00910
ABZR86_RS00915: ABZR86_RS00915 - DUF2059 domain-containing protein, at 181,584 to 182,303
_RS00915
ABZR86_RS00920: ABZR86_RS00920 - 50S ribosomal protein L21, at 182,402 to 182,716
_RS00920
ABZR86_RS00925: ABZR86_RS00925 - 50S ribosomal protein L27, at 182,741 to 182,998
_RS00925
ABZR86_RS00930: ABZR86_RS00930 - Obg family GTPase CgtA, at 183,184 to 184,254
_RS00930
Position (kb) 181
182
183 Strain fitness (log2 ratio) -2
-1
0
1
2 at 180.588 kb on + strand, within ABZR86_RS00910 at 181.005 kb on + strand, within ABZR86_RS00910 at 181.020 kb on + strand, within ABZR86_RS00910 at 181.020 kb on + strand, within ABZR86_RS00910 at 181.020 kb on + strand, within ABZR86_RS00910 at 181.021 kb on - strand, within ABZR86_RS00910 at 181.021 kb on - strand, within ABZR86_RS00910 at 181.021 kb on - strand, within ABZR86_RS00910 at 181.026 kb on + strand, within ABZR86_RS00910 at 181.027 kb on - strand, within ABZR86_RS00910 at 181.027 kb on - strand, within ABZR86_RS00910 at 181.027 kb on - strand, within ABZR86_RS00910 at 181.162 kb on - strand at 181.182 kb on + strand at 181.183 kb on - strand at 181.203 kb on + strand at 181.203 kb on + strand at 181.203 kb on + strand at 181.203 kb on + strand at 181.203 kb on + strand at 181.203 kb on + strand at 181.203 kb on + strand at 181.204 kb on - strand at 181.204 kb on - strand at 181.204 kb on - strand at 181.204 kb on - strand at 181.204 kb on - strand at 181.204 kb on - strand at 181.204 kb on - strand at 181.204 kb on - strand at 181.204 kb on - strand at 181.382 kb on + strand at 181.383 kb on - strand at 181.383 kb on - strand at 181.384 kb on + strand at 181.384 kb on + strand at 181.405 kb on + strand at 181.472 kb on + strand at 181.489 kb on + strand at 181.489 kb on + strand at 181.489 kb on + strand at 181.489 kb on + strand at 181.490 kb on - strand at 181.490 kb on - strand at 181.493 kb on - strand at 181.493 kb on - strand at 181.518 kb on - strand at 181.630 kb on + strand at 181.630 kb on + strand at 181.630 kb on + strand at 181.630 kb on + strand at 181.630 kb on + strand at 181.631 kb on - strand at 181.631 kb on - strand at 181.631 kb on - strand at 181.734 kb on + strand, within ABZR86_RS00915 at 181.734 kb on + strand, within ABZR86_RS00915 at 181.735 kb on - strand, within ABZR86_RS00915 at 181.735 kb on - strand, within ABZR86_RS00915 at 181.747 kb on - strand, within ABZR86_RS00915 at 181.747 kb on - strand, within ABZR86_RS00915 at 181.747 kb on - strand, within ABZR86_RS00915 at 181.797 kb on + strand, within ABZR86_RS00915 at 181.797 kb on + strand, within ABZR86_RS00915 at 181.797 kb on + strand, within ABZR86_RS00915 at 181.798 kb on - strand, within ABZR86_RS00915 at 181.798 kb on - strand, within ABZR86_RS00915 at 181.798 kb on - strand, within ABZR86_RS00915 at 181.798 kb on - strand, within ABZR86_RS00915 at 181.798 kb on - strand, within ABZR86_RS00915 at 181.846 kb on - strand, within ABZR86_RS00915 at 182.301 kb on + strand at 183.060 kb on + strand at 183.060 kb on + strand at 183.060 kb on + strand at 183.060 kb on + strand at 183.061 kb on - strand at 183.074 kb on + strand at 183.081 kb on + strand at 183.081 kb on + strand at 183.081 kb on + strand at 183.085 kb on + strand at 183.085 kb on + strand at 183.085 kb on + strand at 183.085 kb on + strand at 183.085 kb on + strand at 183.085 kb on + strand at 183.085 kb on + strand at 183.085 kb on + strand at 183.085 kb on + strand at 183.085 kb on + strand at 183.085 kb on + strand at 183.086 kb on - strand at 183.086 kb on - strand at 183.086 kb on - strand at 183.086 kb on - strand at 183.086 kb on - strand at 183.086 kb on - strand at 183.112 kb on + strand at 183.112 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 180,588 + ABZR86_RS00910 0.75 -0.5 181,005 + ABZR86_RS00910 0.89 -0.6 181,020 + ABZR86_RS00910 0.89 -0.5 181,020 + ABZR86_RS00910 0.89 -1.6 181,020 + ABZR86_RS00910 0.89 -0.1 181,021 - ABZR86_RS00910 0.89 -1.4 181,021 - ABZR86_RS00910 0.89 -0.1 181,021 - ABZR86_RS00910 0.89 -0.5 181,026 + ABZR86_RS00910 0.89 -0.2 181,027 - ABZR86_RS00910 0.89 +0.2 181,027 - ABZR86_RS00910 0.89 -0.5 181,027 - ABZR86_RS00910 0.89 -0.2 181,162 - +0.2 181,182 + -0.3 181,183 - -0.9 181,203 + +0.3 181,203 + -0.1 181,203 + -0.6 181,203 + +0.4 181,203 + -0.4 181,203 + -0.9 181,203 + +0.9 181,204 - +0.1 181,204 - +0.2 181,204 - +0.1 181,204 - -1.1 181,204 - -0.8 181,204 - +0.1 181,204 - -0.5 181,204 - -0.1 181,204 - -0.5 181,382 + -0.7 181,383 - -0.3 181,383 - +0.3 181,384 + -0.8 181,384 + +0.4 181,405 + -0.3 181,472 + +0.2 181,489 + -0.6 181,489 + -0.0 181,489 + +0.6 181,489 + -0.1 181,490 - +0.1 181,490 - +0.8 181,493 - -1.1 181,493 - +0.7 181,518 - +0.8 181,630 + +0.4 181,630 + +0.4 181,630 + +0.8 181,630 + -0.8 181,630 + -0.2 181,631 - -0.4 181,631 - +0.7 181,631 - -0.0 181,734 + ABZR86_RS00915 0.21 +1.2 181,734 + ABZR86_RS00915 0.21 +0.9 181,735 - ABZR86_RS00915 0.21 +0.8 181,735 - ABZR86_RS00915 0.21 -0.5 181,747 - ABZR86_RS00915 0.23 -0.1 181,747 - ABZR86_RS00915 0.23 +0.6 181,747 - ABZR86_RS00915 0.23 -0.8 181,797 + ABZR86_RS00915 0.30 +0.5 181,797 + ABZR86_RS00915 0.30 -0.4 181,797 + ABZR86_RS00915 0.30 +0.6 181,798 - ABZR86_RS00915 0.30 +0.4 181,798 - ABZR86_RS00915 0.30 +0.3 181,798 - ABZR86_RS00915 0.30 +0.8 181,798 - ABZR86_RS00915 0.30 +2.1 181,798 - ABZR86_RS00915 0.30 -0.3 181,846 - ABZR86_RS00915 0.36 +1.8 182,301 + +0.5 183,060 + -2.5 183,060 + -0.1 183,060 + +2.3 183,060 + -1.3 183,061 - -0.6 183,074 + -0.4 183,081 + +0.4 183,081 + +0.7 183,081 + -0.4 183,085 + -1.3 183,085 + -0.3 183,085 + -0.2 183,085 + -0.5 183,085 + +0.2 183,085 + +1.0 183,085 + +0.3 183,085 + -0.0 183,085 + +0.0 183,085 + +0.7 183,085 + -0.2 183,086 - +0.7 183,086 - +0.7 183,086 - -1.1 183,086 - +0.1 183,086 - +0.1 183,086 - -0.1 183,112 + -0.3 183,112 + -0.2
Or see this region's nucleotide sequence