Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2809
Experiment: MoYLS4 with Gentamicin 0.03 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Gentamicin 0.03 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,550,905 | + | DvMF_2807 | 0.84 | -0.8 | |
3,551,268 | + | DvMF_2808 | 0.30 | -0.5 | |
3,551,327 | - | DvMF_2808 | 0.41 | -0.6 | |
3,551,357 | + | DvMF_2808 | 0.46 | -0.5 | |
3,551,576 | - | DvMF_2808 | 0.87 | -0.6 | |
3,551,658 | + | -0.3 | |||
3,551,666 | - | -0.5 | |||
3,551,666 | - | -0.2 | |||
3,551,838 | + | -0.1 | |||
3,552,000 | + | DvMF_2809 | 0.15 | -0.7 | |
3,552,125 | + | DvMF_2809 | 0.26 | +0.4 | |
3,552,138 | - | DvMF_2809 | 0.27 | +0.1 | |
3,552,249 | - | DvMF_2809 | 0.38 | -0.4 | |
3,552,293 | - | DvMF_2809 | 0.41 | -0.4 | |
3,552,459 | - | DvMF_2809 | 0.57 | -0.5 | |
3,552,506 | + | DvMF_2809 | 0.61 | -0.2 | |
3,552,523 | + | DvMF_2809 | 0.62 | -0.6 | |
3,552,524 | - | DvMF_2809 | 0.62 | -0.3 | |
3,552,775 | + | DvMF_2809 | 0.85 | +0.1 | |
3,552,815 | + | DvMF_2809 | 0.89 | -0.0 | |
3,552,823 | - | DvMF_2809 | 0.89 | -0.0 | |
3,553,313 | + | -0.5 | |||
3,553,313 | + | -0.8 | |||
3,553,313 | + | -1.2 |
Or see this region's nucleotide sequence