Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2685
Experiment: MoYLS4 with Gentamicin 0.03 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Gentamicin 0.03 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,396,266 | + | DvMF_2684 | 0.26 | -0.1 | |
3,396,346 | + | DvMF_2684 | 0.33 | -0.8 | |
3,396,356 | + | DvMF_2684 | 0.34 | -0.5 | |
3,396,453 | + | DvMF_2684 | 0.43 | -0.5 | |
3,396,456 | - | DvMF_2684 | 0.44 | -0.3 | |
3,396,744 | + | DvMF_2684 | 0.70 | -1.1 | |
3,396,861 | - | DvMF_2684 | 0.81 | -0.4 | |
3,396,861 | - | DvMF_2684 | 0.81 | -0.6 | |
3,396,948 | + | DvMF_2684 | 0.89 | -1.0 | |
3,397,048 | + | -0.6 | |||
3,397,459 | + | DvMF_2685 | 0.34 | +0.7 | |
3,397,571 | - | DvMF_2685 | 0.47 | +0.0 | |
3,397,697 | + | DvMF_2685 | 0.61 | -0.2 | |
3,397,710 | - | DvMF_2685 | 0.63 | +0.0 | |
3,398,254 | - | DvMF_2686 | 0.14 | +0.2 | |
3,398,284 | + | DvMF_2686 | 0.17 | -1.2 | |
3,398,399 | + | DvMF_2686 | 0.29 | -0.4 | |
3,398,407 | - | DvMF_2686 | 0.30 | -0.2 | |
3,398,407 | - | DvMF_2686 | 0.30 | -0.2 | |
3,398,429 | - | DvMF_2686 | 0.32 | -0.2 | |
3,398,496 | + | DvMF_2686 | 0.39 | -0.0 | |
3,398,689 | - | DvMF_2686 | 0.60 | -0.7 | |
3,398,802 | + | DvMF_2686 | 0.72 | -0.6 | |
3,398,831 | + | DvMF_2686 | 0.75 | -0.2 | |
3,398,839 | - | DvMF_2686 | 0.75 | -0.3 |
Or see this region's nucleotide sequence