Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1896
Experiment: MoYLS4 with Gentamicin 0.03 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Gentamicin 0.03 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 2,333,800 | - | DvMF_1895 | 0.53 | -2.3 | |
| 2,333,922 | - | DvMF_1895 | 0.60 | -2.3 | |
| 2,334,084 | + | DvMF_1895 | 0.70 | -1.6 | |
| 2,334,127 | + | DvMF_1895 | 0.72 | -1.0 | |
| 2,334,162 | - | DvMF_1895 | 0.74 | -2.2 | |
| 2,334,203 | - | DvMF_1895 | 0.77 | -2.4 | |
| 2,334,243 | + | DvMF_1895 | 0.79 | -1.6 | |
| 2,334,335 | - | DvMF_1895 | 0.85 | -2.0 | |
| 2,334,343 | - | DvMF_1895 | 0.85 | -1.8 | |
| 2,334,448 | + | -1.3 | |||
| 2,334,470 | + | -0.5 | |||
| 2,334,585 | + | +0.6 | |||
| 2,334,783 | + | -3.1 | |||
| 2,334,783 | + | -2.1 | |||
| 2,335,049 | - | DvMF_1896 | 0.46 | -1.4 | |
| 2,335,341 | + | -1.2 | |||
| 2,335,360 | - | -3.3 | |||
| 2,335,572 | - | -1.3 |
Or see this region's nucleotide sequence