Experiment: MoYLS4 with Gentamicin 0.03 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1630 and DvMF_1631 are separated by 349 nucleotides DvMF_1631 and DvMF_1632 overlap by 4 nucleotides
DvMF_1630: DvMF_1630 - protein of unknown function DUF214 (RefSeq), at 2,009,359 to 2,010,507
_1630
DvMF_1631: DvMF_1631 - two component transcriptional regulator, winged helix family (RefSeq), at 2,010,857 to 2,011,684
_1631
DvMF_1632: DvMF_1632 - integral membrane sensor signal transduction histidine kinase (RefSeq), at 2,011,681 to 2,013,288
_1632
Position (kb)
2010
2011
2012 Strain fitness (log2 ratio)
-1
0
1 at 2009.863 kb on - strand, within DvMF_1630 at 2009.865 kb on + strand, within DvMF_1630 at 2009.921 kb on + strand, within DvMF_1630 at 2010.724 kb on + strand at 2010.864 kb on + strand at 2010.872 kb on - strand at 2010.872 kb on - strand at 2010.874 kb on + strand at 2010.921 kb on - strand at 2011.028 kb on - strand, within DvMF_1631 at 2011.028 kb on - strand, within DvMF_1631 at 2011.044 kb on + strand, within DvMF_1631 at 2011.208 kb on + strand, within DvMF_1631 at 2011.216 kb on - strand, within DvMF_1631 at 2011.433 kb on + strand, within DvMF_1631 at 2011.473 kb on - strand, within DvMF_1631 at 2011.783 kb on - strand at 2011.835 kb on - strand at 2011.987 kb on - strand, within DvMF_1632 at 2012.061 kb on + strand, within DvMF_1632 at 2012.102 kb on + strand, within DvMF_1632 at 2012.219 kb on + strand, within DvMF_1632 at 2012.328 kb on - strand, within DvMF_1632 at 2012.335 kb on - strand, within DvMF_1632 at 2012.657 kb on + strand, within DvMF_1632
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Gentamicin 0.03 mg/ml remove 2,009,863 - DvMF_1630 0.44 -1.1 2,009,865 + DvMF_1630 0.44 -0.6 2,009,921 + DvMF_1630 0.49 -0.2 2,010,724 + -0.2 2,010,864 + -0.1 2,010,872 - -0.8 2,010,872 - -0.3 2,010,874 + -0.2 2,010,921 - -0.4 2,011,028 - DvMF_1631 0.21 -0.2 2,011,028 - DvMF_1631 0.21 +0.2 2,011,044 + DvMF_1631 0.23 -0.8 2,011,208 + DvMF_1631 0.42 -0.2 2,011,216 - DvMF_1631 0.43 +0.1 2,011,433 + DvMF_1631 0.70 +0.3 2,011,473 - DvMF_1631 0.74 +0.4 2,011,783 - +0.0 2,011,835 - -0.5 2,011,987 - DvMF_1632 0.19 -0.3 2,012,061 + DvMF_1632 0.24 -0.4 2,012,102 + DvMF_1632 0.26 -1.3 2,012,219 + DvMF_1632 0.33 -0.4 2,012,328 - DvMF_1632 0.40 -0.4 2,012,335 - DvMF_1632 0.41 -0.0 2,012,657 + DvMF_1632 0.61 -0.3
Or see this region's nucleotide sequence