Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1020
Experiment: MoYLS4 with Gentamicin 0.03 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Gentamicin 0.03 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,235,431 | + | DvMF_1019 | 0.26 | -0.1 | |
1,235,673 | - | DvMF_1019 | 0.45 | -0.2 | |
1,235,898 | - | DvMF_1019 | 0.64 | -0.3 | |
1,235,973 | + | DvMF_1019 | 0.70 | -0.4 | |
1,236,008 | - | DvMF_1019 | 0.73 | -0.8 | |
1,236,234 | - | -0.4 | |||
1,236,341 | + | -0.7 | |||
1,236,406 | + | +1.5 | |||
1,236,523 | + | -0.9 | |||
1,236,592 | + | DvMF_1020 | 0.16 | -0.6 | |
1,236,798 | - | DvMF_1020 | 0.35 | -1.6 | |
1,236,991 | - | DvMF_1020 | 0.53 | -0.7 | |
1,237,227 | + | DvMF_1020 | 0.75 | -0.9 | |
1,237,680 | - | -0.7 | |||
1,237,866 | + | +0.7 | |||
1,237,875 | - | +0.8 | |||
1,238,352 | - | DvMF_1021 | 0.82 | -0.2 | |
1,238,364 | - | DvMF_1021 | 0.84 | -0.6 | |
1,238,423 | - | -0.9 |
Or see this region's nucleotide sequence