Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1852

Experiment: Light Dark first sampling rep1

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntcobG and cobH are separated by 24 nucleotidescobH and cobI overlap by 4 nucleotidescobI and cobJ overlap by 4 nucleotides Synpcc7942_1851: cobG - Ferredoxin--nitrite reductase, at 1,919,364 to 1,920,827 cobG Synpcc7942_1852: cobH - precorrin-8X methylmutase, at 1,920,852 to 1,921,481 cobH Synpcc7942_1853: cobI - cobalt-factor II C20-methyltransferase / precorrin-2 C20-methyltransferase, at 1,921,478 to 1,922,182 cobI Synpcc7942_1854: cobJ - precorrin-3 methyltransferase, at 1,922,179 to 1,923,879 cobJ Position (kb) 1920 1921 1922Strain fitness (log2 ratio) -1 0 1at 1920.829 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Light Dark first sampling rep1
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1,920,829 - +0.5

Or see this region's nucleotide sequence