Experiment: Light Dark first sampling rep1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Synpcc7942_0976 and prk are separated by 111 nucleotides prk and petH are separated by 404 nucleotides
Synpcc7942_0976: Synpcc7942_0976 - CBS, at 982,168 to 984,897
_0976
Synpcc7942_0977: prk - phosphoribulokinase, at 985,009 to 986,010
prk
Synpcc7942_0978: petH - ferredoxin-NADP oxidoreductase, at 986,415 to 987,626
petH
Position (kb) 985
986
987 Strain fitness (log2 ratio) -2
-1
0
1
2 at 984.891 kb on + strand at 984.891 kb on + strand at 984.891 kb on + strand at 984.891 kb on + strand at 984.899 kb on - strand at 984.899 kb on - strand at 984.899 kb on - strand at 984.899 kb on - strand at 984.928 kb on + strand at 984.928 kb on + strand at 984.928 kb on + strand at 984.928 kb on + strand at 984.936 kb on - strand at 984.960 kb on - strand at 984.962 kb on - strand at 984.967 kb on + strand at 984.974 kb on - strand at 984.975 kb on - strand at 984.990 kb on - strand at 984.997 kb on + strand at 985.007 kb on + strand at 985.007 kb on + strand at 985.051 kb on + strand at 986.219 kb on + strand at 986.258 kb on + strand at 986.265 kb on + strand at 986.265 kb on + strand at 986.270 kb on + strand at 986.270 kb on + strand at 986.270 kb on + strand at 986.270 kb on + strand at 986.273 kb on - strand at 986.273 kb on - strand at 986.273 kb on - strand at 986.273 kb on - strand at 986.278 kb on - strand at 986.278 kb on - strand at 986.280 kb on + strand at 986.280 kb on - strand at 986.287 kb on + strand at 986.287 kb on + strand at 986.287 kb on + strand at 986.289 kb on + strand at 986.295 kb on - strand at 986.295 kb on - strand at 986.295 kb on - strand at 986.295 kb on - strand at 986.295 kb on - strand at 986.295 kb on - strand at 986.295 kb on - strand at 986.295 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Light Dark first sampling rep1 remove 984,891 + -0.1 984,891 + -0.1 984,891 + +0.4 984,891 + -0.4 984,899 - +0.6 984,899 - -0.2 984,899 - +0.4 984,899 - -0.8 984,928 + +0.1 984,928 + +0.3 984,928 + +0.5 984,928 + +0.5 984,936 - +1.2 984,960 - +0.9 984,962 - +0.6 984,967 + +0.0 984,974 - -0.2 984,975 - -2.5 984,990 - -0.6 984,997 + -0.1 985,007 + +0.1 985,007 + -2.0 985,051 + -0.6 986,219 + +0.4 986,258 + -0.5 986,265 + -0.6 986,265 + -1.2 986,270 + +0.5 986,270 + -0.2 986,270 + -1.7 986,270 + -0.6 986,273 - +0.2 986,273 - -1.0 986,273 - -0.3 986,273 - +0.1 986,278 - -0.1 986,278 - -0.6 986,280 + +0.6 986,280 - +1.6 986,287 + -1.1 986,287 + +2.2 986,287 + -0.3 986,289 + -0.1 986,295 - -1.1 986,295 - +0.1 986,295 - +0.1 986,295 - -0.6 986,295 - -0.4 986,295 - +0.1 986,295 - -0.1 986,295 - +0.6
Or see this region's nucleotide sequence