Experiment: Light Dark first sampling rep1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt mraW and Synpcc7942_0976 are separated by 23 nucleotides Synpcc7942_0976 and prk are separated by 111 nucleotides
Synpcc7942_0975: mraW - S-adenosyl-methyltransferase MraW, at 981,254 to 982,144
mraW
Synpcc7942_0976: Synpcc7942_0976 - CBS, at 982,168 to 984,897
_0976
Synpcc7942_0977: prk - phosphoribulokinase, at 985,009 to 986,010
prk
Position (kb) 982
983
984
985 Strain fitness (log2 ratio) -2
-1
0
1
2 at 981.200 kb on + strand at 981.207 kb on + strand at 981.208 kb on - strand at 981.209 kb on - strand at 981.212 kb on + strand at 981.213 kb on + strand at 981.215 kb on - strand at 981.215 kb on - strand at 981.215 kb on - strand at 981.220 kb on - strand at 981.232 kb on - strand at 981.232 kb on - strand at 981.232 kb on - strand at 981.247 kb on - strand at 981.247 kb on - strand at 981.252 kb on + strand at 981.260 kb on - strand at 981.343 kb on - strand, within mraW at 981.347 kb on + strand, within mraW at 981.371 kb on - strand, within mraW at 981.375 kb on + strand, within mraW at 981.398 kb on + strand, within mraW at 981.406 kb on + strand, within mraW at 981.406 kb on + strand, within mraW at 981.425 kb on + strand, within mraW at 981.430 kb on + strand, within mraW at 981.470 kb on + strand, within mraW at 981.479 kb on + strand, within mraW at 981.488 kb on - strand, within mraW at 981.510 kb on + strand, within mraW at 981.522 kb on + strand, within mraW at 981.522 kb on + strand, within mraW at 981.530 kb on - strand, within mraW at 981.530 kb on - strand, within mraW at 981.579 kb on + strand, within mraW at 981.601 kb on + strand, within mraW at 981.601 kb on + strand, within mraW at 981.609 kb on - strand, within mraW at 981.609 kb on - strand, within mraW at 981.643 kb on + strand, within mraW at 981.651 kb on - strand, within mraW at 981.804 kb on + strand, within mraW at 981.804 kb on + strand, within mraW at 981.804 kb on + strand, within mraW at 981.808 kb on + strand, within mraW at 981.812 kb on - strand, within mraW at 981.829 kb on + strand, within mraW at 981.878 kb on - strand, within mraW at 981.879 kb on - strand, within mraW at 981.894 kb on + strand, within mraW at 981.923 kb on - strand, within mraW at 981.923 kb on - strand, within mraW at 981.939 kb on - strand, within mraW at 981.940 kb on - strand, within mraW at 981.966 kb on - strand, within mraW at 981.984 kb on + strand, within mraW at 981.997 kb on - strand, within mraW at 981.997 kb on - strand, within mraW at 982.028 kb on + strand, within mraW at 982.067 kb on + strand at 982.093 kb on + strand at 982.096 kb on + strand at 982.098 kb on + strand at 982.099 kb on - strand at 982.154 kb on + strand at 982.162 kb on - strand at 982.162 kb on - strand at 982.166 kb on + strand at 982.758 kb on + strand, within Synpcc7942_0976 at 982.766 kb on - strand, within Synpcc7942_0976 at 982.766 kb on - strand, within Synpcc7942_0976 at 983.520 kb on + strand at 984.891 kb on + strand at 984.891 kb on + strand at 984.891 kb on + strand at 984.891 kb on + strand at 984.899 kb on - strand at 984.899 kb on - strand at 984.899 kb on - strand at 984.899 kb on - strand at 984.928 kb on + strand at 984.928 kb on + strand at 984.928 kb on + strand at 984.928 kb on + strand at 984.936 kb on - strand at 984.960 kb on - strand at 984.962 kb on - strand at 984.967 kb on + strand at 984.974 kb on - strand at 984.975 kb on - strand at 984.990 kb on - strand at 984.997 kb on + strand at 985.007 kb on + strand at 985.007 kb on + strand at 985.051 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Light Dark first sampling rep1 remove 981,200 + +0.1 981,207 + +0.3 981,208 - +0.1 981,209 - +0.5 981,212 + -0.1 981,213 + +0.4 981,215 - -0.7 981,215 - +0.9 981,215 - +1.1 981,220 - -2.0 981,232 - -0.1 981,232 - -0.7 981,232 - +0.9 981,247 - -1.1 981,247 - -0.8 981,252 + +0.6 981,260 - -0.1 981,343 - mraW Synpcc7942_0975 0.10 +1.4 981,347 + mraW Synpcc7942_0975 0.10 +1.3 981,371 - mraW Synpcc7942_0975 0.13 +1.8 981,375 + mraW Synpcc7942_0975 0.14 +1.2 981,398 + mraW Synpcc7942_0975 0.16 +0.3 981,406 + mraW Synpcc7942_0975 0.17 +1.2 981,406 + mraW Synpcc7942_0975 0.17 +0.9 981,425 + mraW Synpcc7942_0975 0.19 +0.6 981,430 + mraW Synpcc7942_0975 0.20 +0.2 981,470 + mraW Synpcc7942_0975 0.24 +0.9 981,479 + mraW Synpcc7942_0975 0.25 +1.5 981,488 - mraW Synpcc7942_0975 0.26 +0.2 981,510 + mraW Synpcc7942_0975 0.29 +0.0 981,522 + mraW Synpcc7942_0975 0.30 +1.5 981,522 + mraW Synpcc7942_0975 0.30 +1.0 981,530 - mraW Synpcc7942_0975 0.31 +0.7 981,530 - mraW Synpcc7942_0975 0.31 +1.0 981,579 + mraW Synpcc7942_0975 0.36 +0.6 981,601 + mraW Synpcc7942_0975 0.39 +0.8 981,601 + mraW Synpcc7942_0975 0.39 +0.1 981,609 - mraW Synpcc7942_0975 0.40 +0.9 981,609 - mraW Synpcc7942_0975 0.40 +0.6 981,643 + mraW Synpcc7942_0975 0.44 +0.7 981,651 - mraW Synpcc7942_0975 0.45 +0.1 981,804 + mraW Synpcc7942_0975 0.62 +0.2 981,804 + mraW Synpcc7942_0975 0.62 +1.1 981,804 + mraW Synpcc7942_0975 0.62 +2.0 981,808 + mraW Synpcc7942_0975 0.62 +1.0 981,812 - mraW Synpcc7942_0975 0.63 +1.1 981,829 + mraW Synpcc7942_0975 0.65 +0.6 981,878 - mraW Synpcc7942_0975 0.70 +0.6 981,879 - mraW Synpcc7942_0975 0.70 +0.3 981,894 + mraW Synpcc7942_0975 0.72 +1.1 981,923 - mraW Synpcc7942_0975 0.75 +0.9 981,923 - mraW Synpcc7942_0975 0.75 +0.8 981,939 - mraW Synpcc7942_0975 0.77 +2.0 981,940 - mraW Synpcc7942_0975 0.77 +0.3 981,966 - mraW Synpcc7942_0975 0.80 +1.0 981,984 + mraW Synpcc7942_0975 0.82 +0.1 981,997 - mraW Synpcc7942_0975 0.83 +1.0 981,997 - mraW Synpcc7942_0975 0.83 +0.6 982,028 + mraW Synpcc7942_0975 0.87 +0.5 982,067 + +0.7 982,093 + +0.6 982,096 + +0.3 982,098 + +1.0 982,099 - +1.6 982,154 + +0.7 982,162 - +0.9 982,162 - -0.5 982,166 + +0.8 982,758 + Synpcc7942_0976 0.22 -1.2 982,766 - Synpcc7942_0976 0.22 -0.9 982,766 - Synpcc7942_0976 0.22 -0.4 983,520 + -0.9 984,891 + -0.1 984,891 + -0.1 984,891 + +0.4 984,891 + -0.4 984,899 - +0.6 984,899 - -0.2 984,899 - +0.4 984,899 - -0.8 984,928 + +0.1 984,928 + +0.3 984,928 + +0.5 984,928 + +0.5 984,936 - +1.2 984,960 - +0.9 984,962 - +0.6 984,967 + +0.0 984,974 - -0.2 984,975 - -2.5 984,990 - -0.6 984,997 + -0.1 985,007 + +0.1 985,007 + -2.0 985,051 + -0.6
Or see this region's nucleotide sequence