Experiment: D-Xylose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_4994 and Pf6N2E2_4995 are separated by 71 nucleotides Pf6N2E2_4995 and Pf6N2E2_4996 are separated by 9 nucleotides Pf6N2E2_4996 and Pf6N2E2_4997 are separated by 9 nucleotides
Pf6N2E2_4994 - Nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18), at 5,760,400 to 5,761,086
_4994
Pf6N2E2_4995 - Iojap protein, at 5,761,158 to 5,761,652
_4995
Pf6N2E2_4996 - LSU m3Psi1915 methyltransferase RlmH, at 5,761,662 to 5,762,129
_4996
Pf6N2E2_4997 - Penicillin-binding protein 2 (PBP-2), at 5,762,139 to 5,764,034
_4997
Position (kb) 5761
5762
5763 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5760.691 kb on + strand, within Pf6N2E2_4994 at 5760.691 kb on + strand, within Pf6N2E2_4994 at 5760.691 kb on + strand, within Pf6N2E2_4994 at 5760.691 kb on + strand, within Pf6N2E2_4994 at 5760.691 kb on + strand, within Pf6N2E2_4994 at 5761.119 kb on + strand at 5761.137 kb on + strand at 5761.137 kb on + strand at 5761.137 kb on + strand at 5761.137 kb on + strand at 5761.728 kb on + strand, within Pf6N2E2_4996 at 5761.728 kb on + strand, within Pf6N2E2_4996 at 5761.728 kb on + strand, within Pf6N2E2_4996 at 5761.728 kb on + strand, within Pf6N2E2_4996 at 5761.728 kb on + strand, within Pf6N2E2_4996 at 5762.085 kb on + strand at 5762.085 kb on + strand at 5762.127 kb on + strand at 5762.127 kb on + strand at 5762.127 kb on + strand at 5762.127 kb on + strand at 5762.127 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Xylose (C) remove 5,760,691 + Pf6N2E2_4994 0.42 -0.2 5,760,691 + Pf6N2E2_4994 0.42 -0.2 5,760,691 + Pf6N2E2_4994 0.42 +0.3 5,760,691 + Pf6N2E2_4994 0.42 +0.8 5,760,691 + Pf6N2E2_4994 0.42 +0.1 5,761,119 + +0.4 5,761,137 + +0.0 5,761,137 + -0.5 5,761,137 + -1.1 5,761,137 + -0.3 5,761,728 + Pf6N2E2_4996 0.14 -1.1 5,761,728 + Pf6N2E2_4996 0.14 +2.1 5,761,728 + Pf6N2E2_4996 0.14 +0.3 5,761,728 + Pf6N2E2_4996 0.14 -1.5 5,761,728 + Pf6N2E2_4996 0.14 -2.1 5,762,085 + +0.1 5,762,085 + +0.0 5,762,127 + -0.7 5,762,127 + -2.2 5,762,127 + +0.1 5,762,127 + -0.6 5,762,127 + -0.4
Or see this region's nucleotide sequence