Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03230

Experiment: N-Acetyl-D-glucosamine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	N-Acetyl-D-glucosamine (N)
3,394,777	+		CCNA_03229	0.32	+0.6
3,394,785	-		CCNA_03229	0.33	+2.1
3,394,809	+		CCNA_03229	0.35	-0.5
3,394,883	+		CCNA_03229	0.41	-0.0
3,394,885	-		CCNA_03229	0.41	+0.3
3,394,891	-		CCNA_03229	0.41	+1.0
3,394,901	-		CCNA_03229	0.42	-2.9
3,394,928	-		CCNA_03229	0.44	-0.2
3,394,928	-		CCNA_03229	0.44	-2.5
3,395,012	+		CCNA_03229	0.51	-1.0
3,395,014	-		CCNA_03229	0.51	+0.5
3,395,053	-		CCNA_03229	0.54	+0.8
3,395,053	-		CCNA_03229	0.54	+1.0
3,395,058	-		CCNA_03229	0.54	+0.4
3,395,058	-		CCNA_03229	0.54	-0.9
3,395,058	-		CCNA_03229	0.54	-0.9
3,395,074	-		CCNA_03229	0.55	+1.4
3,395,130	-		CCNA_03229	0.60	+2.6
3,395,143	-		CCNA_03229	0.61	-0.9
3,395,172	+		CCNA_03229	0.63	+1.0
3,395,180	-		CCNA_03229	0.64	+0.6
3,395,181	+		CCNA_03229	0.64	+0.5
3,395,181	+		CCNA_03229	0.64	+0.2
3,395,181	+		CCNA_03229	0.64	+0.2
3,395,189	-		CCNA_03229	0.64	+0.1
3,395,194	+		CCNA_03229	0.65	+0.6
3,395,208	+		CCNA_03229	0.66	-0.2
3,395,232	-		CCNA_03229	0.68	-1.0
3,395,233	-		CCNA_03229	0.68	-1.1
3,395,251	-		CCNA_03229	0.69	-2.3
3,395,260	+		CCNA_03229	0.70	+0.4
3,395,260	+		CCNA_03229	0.70	+1.0
3,395,268	-		CCNA_03229	0.70	+2.6
3,395,268	-		CCNA_03229	0.70	+2.0
3,395,284	+		CCNA_03229	0.72	+1.4
3,395,291	+		CCNA_03229	0.72	-0.1
3,395,325	+		CCNA_03229	0.75	-0.6
3,395,331	-		CCNA_03229	0.75	-0.4
3,395,332	-		CCNA_03229	0.75	+0.2
3,395,403	-		CCNA_03229	0.81	-0.2
3,395,405	+		CCNA_03229	0.81	-1.2
3,395,410	+		CCNA_03229	0.81	+1.6
3,395,413	-		CCNA_03229	0.82	+3.0
3,395,413	-		CCNA_03229	0.82	+0.9
3,395,413	-		CCNA_03229	0.82	-0.7
3,395,413	-		CCNA_03229	0.82	-1.3
3,395,456	+		CCNA_03229	0.85	+0.7
3,395,479	+		CCNA_03229	0.87	+0.7
3,395,493	-		CCNA_03229	0.88	+0.8
3,395,493	-		CCNA_03229	0.88	+0.5
3,395,506	+		CCNA_03229	0.89	+0.8
3,395,510	-		CCNA_03229	0.89	+0.3
3,395,514	-		CCNA_03229	0.89	-1.3
3,395,525	+				-2.4
3,395,525	+				+0.1
3,395,538	-				+1.0
3,395,567	+				-0.2
3,395,581	+				+1.0
3,395,583	-				+1.4
3,395,608	+				-2.2
3,395,616	-				-0.2
3,395,621	+				-0.1
3,395,621	+				-1.5
3,395,636	-				-1.2
3,395,645	+				-1.0
3,395,668	+				-0.0
3,395,668	+				+1.4
3,395,676	-				-0.2
3,395,681	-				+0.1
3,395,754	-				+0.7
3,395,762	-				+3.6
3,395,762	-				+0.2
3,395,781	-				+0.1
3,395,796	+				-0.0
3,395,806	+				+2.0
3,395,806	+				+0.2
3,395,806	+				-1.3
3,395,806	+				-0.4
3,395,806	+				-0.9
3,395,806	+				-2.3
3,395,806	+				-1.2
3,395,806	+				-0.2
3,395,806	+				+2.1
3,395,806	+				+1.2
3,395,806	+				+1.4
3,395,806	+				-1.0
3,395,806	+				-1.7
3,395,806	+				-0.2
3,395,806	+				+1.4
3,395,806	+				-0.7
3,395,806	+				-0.6
3,395,806	+				+0.4
3,395,806	+				-0.7
3,395,814	-				+0.3
3,395,814	-				+0.6
3,395,814	-				+0.4
3,395,814	-				-0.9
3,395,814	-				-0.6
3,395,814	-				-0.9
3,395,814	-				-1.1
3,395,814	-				-0.0
3,395,814	-				-0.5
3,395,814	-				-2.3
3,395,814	-				-1.7
3,395,814	-				+0.4
3,395,814	-				+0.2
3,395,814	-				+1.2
3,395,814	-				+1.4
3,395,814	-				+0.5
3,395,814	-				-1.0
3,395,814	-				-1.2
3,395,814	-				-2.0
3,395,814	-				+0.0
3,395,814	-				+0.4
3,395,814	-				+0.1
3,395,814	-				+3.7
3,395,814	-				+0.1
3,395,814	-				-0.2
3,395,814	-				-1.6
3,395,814	-				-1.0
3,395,814	-				+0.3
3,395,814	-				-0.0
3,395,814	-				+0.2
3,395,814	-				+0.1
3,395,814	-				+0.9
3,395,814	-				+2.2
3,395,876	-		CCNA_03230	0.11	-1.5
3,395,906	-		CCNA_03230	0.13	-1.7
3,395,943	+		CCNA_03230	0.16	+0.4
3,395,950	+		CCNA_03230	0.16	-0.7
3,395,958	-		CCNA_03230	0.17	-0.8
3,395,958	-		CCNA_03230	0.17	+0.8
3,396,008	-		CCNA_03230	0.20	-0.0
3,396,075	+		CCNA_03230	0.25	-1.8
3,396,088	-		CCNA_03230	0.26	-0.4
3,396,099	-		CCNA_03230	0.27	+0.4
3,396,099	-				+1.4
3,396,107	+		CCNA_03230	0.27	-0.0
3,396,107	+		CCNA_03230	0.27	-1.0
3,396,141	+		CCNA_03230	0.30	-0.7
3,396,156	-		CCNA_03230	0.31	-1.0
3,396,241	+		CCNA_03230	0.37	-1.3
3,396,248	+		CCNA_03230	0.37	+0.8
3,396,292	+		CCNA_03230	0.41	-1.3
3,396,303	-		CCNA_03230	0.41	+0.6
3,396,344	+		CCNA_03230	0.44	+1.0
3,396,352	-		CCNA_03230	0.45	+0.2
3,396,358	+		CCNA_03230	0.45	-3.0
3,396,378	+		CCNA_03230	0.47	-1.3
3,396,429	+		CCNA_03230	0.50	-0.5
3,396,440	+		CCNA_03230	0.51	-0.9
3,396,442	-		CCNA_03230	0.51	-0.3
3,396,448	-		CCNA_03230	0.52	-0.9
3,396,514	-		CCNA_03230	0.56	-1.3
3,396,518	+		CCNA_03230	0.57	+0.6
3,396,565	-		CCNA_03230	0.60	-0.7
3,396,575	+		CCNA_03230	0.61	-1.4
3,396,575	+		CCNA_03230	0.61	+0.6
3,396,575	+		CCNA_03230	0.61	-0.0
3,396,583	-		CCNA_03230	0.61	-0.9
3,396,585	+		CCNA_03230	0.62	+0.8
3,396,593	-		CCNA_03230	0.62	-2.1
3,396,611	+				+3.0
3,396,627	-		CCNA_03230	0.65	+1.0
3,396,682	+		CCNA_03230	0.68	-0.2
3,396,701	+		CCNA_03230	0.70	-2.4
3,396,785	+		CCNA_03230	0.76	-0.5
3,396,792	+		CCNA_03230	0.76	-0.0
3,396,793	-		CCNA_03230	0.76	-0.2
3,396,802	+		CCNA_03230	0.77	+1.4
3,396,802	+		CCNA_03230	0.77	-0.8
3,396,826	+		CCNA_03230	0.79	-0.5
3,396,834	-		CCNA_03230	0.79	-0.7
3,396,856	-		CCNA_03230	0.81	-1.1
3,396,861	-		CCNA_03230	0.81	+0.2
3,396,904	+		CCNA_03230	0.84	-0.9
3,396,946	+		CCNA_03230	0.87	+0.6
3,396,946	+		CCNA_03230	0.87	-0.6
3,396,965	+		CCNA_03230	0.89	-1.0
3,396,973	-		CCNA_03230	0.89	-0.1
3,397,018	-				-0.0
3,397,020	-				+0.0
3,397,048	-				-0.1
3,397,048	-				-1.6
3,397,054	-				-1.0
3,397,054	-				-1.0
3,397,083	+				-2.0
3,397,094	+				-0.2
3,397,094	+				-0.8
3,397,102	-				+0.4
3,397,108	-				+1.2
3,397,108	-				+1.7
3,397,108	-				-0.5
3,397,123	-				+0.8
3,397,194	+		CCNA_03988	0.14	-0.9
3,397,202	-				-1.0
3,397,202	-				-0.5
3,397,210	+				-1.4
3,397,237	-				-2.1
3,397,257	+				+2.4
3,397,292	-				+1.4
3,397,318	+				-0.4
3,397,320	+				-0.9
3,397,321	+				+3.0
3,397,340	-				+0.4
3,397,349	-				-2.0
3,397,376	+				+0.6
3,397,385	-				-0.9
3,397,520	+		CCNA_03232	0.56	+1.0
3,397,528	+		CCNA_03232	0.59	+1.0
3,397,528	+		CCNA_03232	0.59	-2.0
3,397,536	-		CCNA_03232	0.62	-1.7
3,397,536	-		CCNA_03232	0.62	+0.5
3,397,536	-		CCNA_03232	0.62	+0.2
3,397,546	-		CCNA_03232	0.66	-2.3
3,397,546	-		CCNA_03232	0.66	-0.5
3,397,566	+		CCNA_03232	0.73	-0.1
3,397,574	-		CCNA_03232	0.76	-1.3
3,397,584	-		CCNA_03232	0.79	-2.7
3,397,630	+				-1.1
3,397,633	+				+0.1
3,397,634	+				+1.4
3,397,638	-				+3.0
3,397,643	-				-1.6
3,397,643	-				+0.2
3,397,686	+				+1.7
3,397,710	+				+1.1
3,397,718	-				-1.4
3,397,718	-				-0.1
3,397,758	+				+1.2
3,397,760	+				-1.3
3,397,766	-				+0.5
3,397,766	-				+1.8
3,397,775	-				-1.8
3,397,789	+		CCNA_03233	0.10	-0.0
3,397,798	-		CCNA_03233	0.11	+0.3
3,397,828	+		CCNA_03233	0.13	+0.2
3,397,888	+		CCNA_03233	0.17	+1.0
3,397,898	+		CCNA_03233	0.18	-1.2
3,397,906	-		CCNA_03233	0.19	-1.1
3,397,911	-		CCNA_03233	0.19	-1.2
3,397,949	+		CCNA_03233	0.22	-0.9
3,397,956	+		CCNA_03233	0.22	-1.2
3,397,956	+		CCNA_03233	0.22	-0.3
3,397,956	+		CCNA_03233	0.22	-0.6
3,397,964	-		CCNA_03233	0.23	+0.9
3,397,977	+		CCNA_03233	0.24	+0.7
3,398,028	+		CCNA_03233	0.27	-2.8
3,398,051	+		CCNA_03233	0.29	-0.5
3,398,051	+		CCNA_03233	0.29	+2.0
3,398,051	+		CCNA_03233	0.29	-0.6
3,398,059	-		CCNA_03233	0.30	+0.1
3,398,059	-		CCNA_03233	0.30	+1.4
3,398,059	-		CCNA_03233	0.30	-0.5
3,398,068	+		CCNA_03233	0.30	+0.3
3,398,094	-		CCNA_03233	0.32	-1.0