Experiment: N-Acetyl-D-glucosamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CCNA_01630 and CCNA_01632 are separated by 303 nucleotides CCNA_01632 and CCNA_01633 are separated by 149 nucleotides
CCNA_01630: CCNA_01630 - ribonuclease III, at 1,750,026 to 1,750,721
_01630
CCNA_01632: CCNA_01632 - hypothetical protein, at 1,751,025 to 1,751,486
_01632
CCNA_01633: CCNA_01633 - GTP-binding protein era, at 1,751,636 to 1,752,586
_01633
Position (kb)
1751
1752 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1750.697 kb on + strand at 1750.697 kb on + strand at 1750.716 kb on + strand at 1750.716 kb on + strand at 1750.716 kb on + strand at 1750.724 kb on - strand at 1750.724 kb on - strand at 1750.797 kb on + strand at 1750.820 kb on + strand at 1750.820 kb on + strand at 1750.908 kb on - strand at 1750.929 kb on - strand at 1750.934 kb on - strand at 1750.973 kb on + strand at 1750.981 kb on - strand at 1750.981 kb on - strand at 1751.002 kb on - strand at 1751.051 kb on + strand at 1751.066 kb on + strand at 1751.085 kb on + strand, within CCNA_01632 at 1751.096 kb on + strand, within CCNA_01632 at 1751.190 kb on - strand, within CCNA_01632 at 1751.215 kb on - strand, within CCNA_01632 at 1751.232 kb on + strand, within CCNA_01632 at 1751.238 kb on + strand, within CCNA_01632 at 1751.288 kb on + strand, within CCNA_01632 at 1751.288 kb on + strand, within CCNA_01632 at 1751.296 kb on - strand, within CCNA_01632 at 1751.296 kb on - strand, within CCNA_01632 at 1751.296 kb on - strand, within CCNA_01632 at 1751.296 kb on - strand, within CCNA_01632 at 1751.296 kb on - strand, within CCNA_01632 at 1751.296 kb on - strand, within CCNA_01632 at 1751.296 kb on - strand, within CCNA_01632 at 1751.329 kb on - strand, within CCNA_01632 at 1751.350 kb on + strand, within CCNA_01632 at 1751.405 kb on + strand, within CCNA_01632 at 1751.413 kb on - strand, within CCNA_01632 at 1751.418 kb on - strand, within CCNA_01632 at 1751.429 kb on - strand, within CCNA_01632 at 1751.454 kb on + strand at 1751.454 kb on + strand at 1751.454 kb on + strand at 1751.454 kb on + strand at 1751.454 kb on + strand at 1751.462 kb on - strand at 1751.462 kb on - strand at 1751.462 kb on - strand at 1751.462 kb on - strand at 1751.475 kb on - strand at 1751.478 kb on - strand at 1751.492 kb on - strand at 1751.493 kb on + strand at 1751.509 kb on - strand at 1751.526 kb on - strand at 1751.526 kb on - strand at 1751.526 kb on - strand at 1751.528 kb on + strand at 1751.583 kb on + strand at 1751.591 kb on - strand at 1751.599 kb on - strand at 1751.626 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction N-Acetyl-D-glucosamine (N) remove 1,750,697 + +0.4 1,750,697 + -1.7 1,750,716 + +0.8 1,750,716 + +1.2 1,750,716 + -0.1 1,750,724 - -0.2 1,750,724 - +0.9 1,750,797 + +0.4 1,750,820 + +3.2 1,750,820 + +0.4 1,750,908 - -1.6 1,750,929 - -0.6 1,750,934 - +0.9 1,750,973 + +1.9 1,750,981 - -0.8 1,750,981 - -0.2 1,751,002 - +0.1 1,751,051 + +0.8 1,751,066 + -0.5 1,751,085 + CCNA_01632 0.13 -0.5 1,751,096 + CCNA_01632 0.15 +0.9 1,751,190 - CCNA_01632 0.36 -1.4 1,751,215 - CCNA_01632 0.41 -0.4 1,751,232 + CCNA_01632 0.45 -1.8 1,751,238 + CCNA_01632 0.46 +1.9 1,751,288 + CCNA_01632 0.57 +0.2 1,751,288 + CCNA_01632 0.57 +0.6 1,751,296 - CCNA_01632 0.59 +0.1 1,751,296 - CCNA_01632 0.59 +1.4 1,751,296 - CCNA_01632 0.59 -0.3 1,751,296 - CCNA_01632 0.59 -1.1 1,751,296 - CCNA_01632 0.59 -0.2 1,751,296 - CCNA_01632 0.59 -1.2 1,751,296 - CCNA_01632 0.59 +1.4 1,751,329 - CCNA_01632 0.66 +0.6 1,751,350 + CCNA_01632 0.70 -0.4 1,751,405 + CCNA_01632 0.82 -1.9 1,751,413 - CCNA_01632 0.84 -2.0 1,751,418 - CCNA_01632 0.85 -2.3 1,751,429 - CCNA_01632 0.87 +0.1 1,751,454 + +1.5 1,751,454 + +0.6 1,751,454 + +1.9 1,751,454 + -0.4 1,751,454 + -1.6 1,751,462 - -0.2 1,751,462 - -0.2 1,751,462 - +0.1 1,751,462 - -0.4 1,751,475 - +0.6 1,751,478 - +0.4 1,751,492 - -0.4 1,751,493 + +0.2 1,751,509 - -1.6 1,751,526 - -0.0 1,751,526 - -1.5 1,751,526 - +0.6 1,751,528 + -0.2 1,751,583 + -1.6 1,751,591 - -0.4 1,751,599 - -1.1 1,751,626 - -1.2
Or see this region's nucleotide sequence