Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS17280

Experiment: R2A with D-Cycloserine 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.2 mg/ml
4,320,055	-		CA265_RS17275	0.82	+0.4
4,320,125	+				-0.2
4,320,125	+				+0.1
4,320,155	+				+0.3
4,320,199	-				-1.0
4,320,200	+				+0.2
4,320,200	+				+0.5
4,320,207	-				+2.1
4,320,207	-				+0.2
4,320,219	-				+0.4
4,320,240	-				+0.4
4,320,306	-				+0.4
4,320,525	-				+0.9
4,320,580	-				-0.2
4,320,596	+				-0.2
4,320,596	+				-0.2
4,320,601	+				-0.1
4,320,630	+				+0.1
4,320,658	-				+1.0
4,320,662	+				-0.2
4,320,788	+				-0.0
4,320,788	+				-0.5
4,320,788	+				-0.4
4,320,789	-				-0.1
4,320,807	+				-1.1
4,320,808	-				+0.9
4,320,832	+				+0.6
4,320,953	+				-0.3
4,320,987	+				-0.7
4,320,988	-				+0.5
4,321,044	+				-1.1
4,321,045	-				+0.9
4,321,045	-				-0.3
4,321,045	-				+0.1
4,321,066	+				-0.7
4,321,066	+				-0.2
4,321,067	-				-0.4
4,321,171	-				-0.8
4,321,224	+				-0.8
4,321,225	-				-0.1
4,321,246	-		CA265_RS17280	0.11	+1.0
4,321,246	-		CA265_RS17280	0.11	+0.0
4,321,246	-		CA265_RS17280	0.11	+1.1
4,321,246	-		CA265_RS17280	0.11	+0.1
4,321,286	-		CA265_RS17280	0.13	-1.4
4,321,286	-		CA265_RS17280	0.13	-2.5
4,321,293	-		CA265_RS17280	0.13	-0.6
4,321,449	-		CA265_RS17280	0.20	-0.2
4,321,453	+		CA265_RS17280	0.21	-1.2
4,321,453	+		CA265_RS17280	0.21	-0.3
4,321,454	-		CA265_RS17280	0.21	+0.6
4,321,458	+		CA265_RS17280	0.21	-0.3
4,321,458	+		CA265_RS17280	0.21	-0.3
4,321,459	-		CA265_RS17280	0.21	-0.4
4,321,459	-		CA265_RS17280	0.21	-0.8
4,321,521	-		CA265_RS17280	0.24	-2.1
4,321,521	-		CA265_RS17280	0.24	-1.0
4,321,581	+		CA265_RS17280	0.27	-1.1
4,321,602	-		CA265_RS17280	0.28	+0.1
4,321,635	+		CA265_RS17280	0.29	-0.7
4,321,636	-		CA265_RS17280	0.29	-0.0
4,321,639	+				-0.5
4,321,737	-		CA265_RS17280	0.34	+0.4
4,321,781	-		CA265_RS17280	0.36	-0.2
4,321,790	-		CA265_RS17280	0.37	-0.3
4,321,862	+		CA265_RS17280	0.40	-0.7
4,322,030	-		CA265_RS17280	0.48	+0.3
4,322,085	+		CA265_RS17280	0.51	-1.9
4,322,156	-		CA265_RS17280	0.54	+0.8
4,322,210	+		CA265_RS17280	0.57	-0.8
4,322,321	-		CA265_RS17280	0.62	-0.8
4,322,330	+		CA265_RS17280	0.63	-1.1
4,322,341	+		CA265_RS17280	0.63	-0.3
4,322,436	-		CA265_RS17280	0.68	+0.3
4,322,440	-		CA265_RS17280	0.68	+0.1
4,322,495	-		CA265_RS17280	0.71	-0.0
4,322,537	+		CA265_RS17280	0.73	-0.1
4,322,538	-		CA265_RS17280	0.73	-0.2
4,322,649	-		CA265_RS17280	0.78	-2.5
4,322,649	-		CA265_RS17280	0.78	-0.3
4,322,674	-		CA265_RS17280	0.79	-0.3
4,322,682	+		CA265_RS17280	0.80	+0.5
4,322,724	+		CA265_RS17280	0.82	+0.4
4,322,746	-		CA265_RS17280	0.83	-0.9
4,322,852	-		CA265_RS17280	0.88	-0.1
4,322,994	-				-1.0
4,323,024	+				-0.1
4,323,107	+				+0.5
4,323,108	-				-1.6
4,323,108	-				-0.0
4,323,109	+				-1.5
4,323,109	+				+0.2
4,323,110	-				-0.4
4,323,159	+				-0.5
4,323,159	+				-0.7
4,323,159	+				+1.2
4,323,159	+				+0.0
4,323,239	+				+1.2
4,323,240	-				-0.2
4,323,243	-				+1.0
4,323,249	+				+0.1
4,323,270	+				+0.3
4,323,270	+				-0.6
4,323,364	+				+0.5
4,323,439	+				+0.4
4,323,663	+		CA265_RS17285	0.46	-0.6
4,323,664	-		CA265_RS17285	0.47	-0.4
4,323,670	+		CA265_RS17285	0.50	+1.3
4,323,721	-		CA265_RS17285	0.77	-1.0
4,323,829	-				+0.1
4,323,829	-				+0.4
4,323,868	-				+0.3
4,323,913	+		CA265_RS17290	0.51	-0.5
4,323,942	-				+1.0
4,323,965	-				+0.3
4,323,986	-				-1.5
4,324,006	+				-0.2
4,324,024	-				+0.2
4,324,025	+				-0.0
4,324,084	+				-0.5
4,324,089	+				-1.3
4,324,100	+				-0.8