Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS15890

Experiment: R2A with D-Cycloserine 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.2 mg/ml
3,993,585	+		CA265_RS15880	0.47	+2.5
3,993,799	-		CA265_RS15880	0.69	+2.7
3,993,799	-		CA265_RS15880	0.69	+2.5
3,993,799	-		CA265_RS15880	0.69	+2.5
3,993,823	-		CA265_RS15880	0.71	+2.8
3,994,003	+		CA265_RS15880	0.89	+2.7
3,994,093	+				+2.1
3,994,112	+				+1.1
3,994,211	+				-0.8
3,994,212	-				-0.1
3,994,216	-				+0.4
3,994,229	+				+0.5
3,994,230	-				+0.9
3,994,539	+				-0.4
3,994,540	-				+0.5
3,994,555	+				+1.2
3,994,579	+		CA265_RS15890	0.12	-0.6
3,994,677	-		CA265_RS15890	0.36	-0.7
3,994,677	-		CA265_RS15890	0.36	+0.1
3,994,679	+		CA265_RS15890	0.36	-0.4
3,994,699	+		CA265_RS15890	0.41	-0.1
3,994,705	+		CA265_RS15890	0.43	-0.8
3,994,753	-		CA265_RS15890	0.54	+0.2
3,994,753	-		CA265_RS15890	0.54	-0.8
3,994,755	+		CA265_RS15890	0.55	+0.1
3,994,779	+				+2.1
3,994,856	-		CA265_RS15890	0.79	-2.0
3,994,862	-		CA265_RS15890	0.80	-0.2
3,994,862	-		CA265_RS15890	0.80	-0.6
3,994,863	+		CA265_RS15890	0.81	-0.8
3,994,864	-		CA265_RS15890	0.81	-0.2
3,994,880	-		CA265_RS15890	0.85	-0.2
3,994,903	-				-0.4
3,995,024	-				-0.1
3,995,206	-		CA265_RS15895	0.20	+1.5
3,995,209	+		CA265_RS15895	0.20	+0.4
3,995,361	+		CA265_RS15895	0.39	+1.0
3,995,444	-		CA265_RS15895	0.50	+0.9
3,995,490	-		CA265_RS15895	0.56	-0.5
3,995,493	+		CA265_RS15895	0.56	-1.5
3,995,572	-		CA265_RS15895	0.66	-0.1
3,995,621	+		CA265_RS15895	0.73	+1.5
3,995,755	+		CA265_RS15895	0.90	+0.1
3,995,857	-				+0.7
3,995,857	-				-1.3
3,995,866	-				+0.2