Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS15785

Experiment: R2A with D-Cycloserine 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.2 mg/ml
3,973,175	-		CA265_RS15780	0.62	+1.1
3,973,377	+		CA265_RS15780	0.83	-0.9
3,973,382	-		CA265_RS15780	0.83	+0.5
3,973,382	-		CA265_RS15780	0.83	+1.2
3,973,416	-		CA265_RS15780	0.87	+1.7
3,973,416	-		CA265_RS15780	0.87	+1.8
3,973,547	-				+0.5
3,973,620	+				-0.7
3,973,621	-				+1.9
3,973,797	-				+0.6
3,973,962	+				-0.1
3,973,962	+				+0.4
3,973,964	+				-1.6
3,973,991	-				+1.0
3,974,038	+				-0.6
3,974,087	-				+1.1
3,974,089	-				+0.8
3,974,155	+				-2.8
3,974,157	+				-1.4
3,974,172	+				-2.0
3,974,248	+		CA265_RS15785	0.11	-2.1
3,974,249	-		CA265_RS15785	0.12	+2.5
3,974,330	+		CA265_RS15785	0.21	-2.0
3,974,374	-		CA265_RS15785	0.26	+1.8
3,974,400	+		CA265_RS15785	0.29	-1.5
3,974,401	-		CA265_RS15785	0.29	+1.0
3,974,434	+		CA265_RS15785	0.32	-1.4
3,974,435	-		CA265_RS15785	0.32	-0.2
3,974,435	-		CA265_RS15785	0.32	+1.6
3,974,437	-		CA265_RS15785	0.33	+1.5
3,974,665	+		CA265_RS15785	0.58	-1.5
3,974,689	-		CA265_RS15785	0.61	+1.3
3,974,725	-		CA265_RS15785	0.65	+1.7
3,974,801	+		CA265_RS15785	0.74	-2.3
3,974,828	+		CA265_RS15785	0.77	+1.5
3,974,828	+		CA265_RS15785	0.77	-2.3
3,974,850	-		CA265_RS15785	0.79	+0.5
3,974,856	-		CA265_RS15785	0.80	+0.8
3,974,856	-		CA265_RS15785	0.80	+0.7
3,974,856	-		CA265_RS15785	0.80	+0.9
3,974,865	+		CA265_RS15785	0.81	-2.0
3,974,866	-		CA265_RS15785	0.81	+1.5
3,974,910	-		CA265_RS15785	0.86	+0.3
3,975,020	-				+1.4
3,975,052	+				+0.5
3,975,053	-				+0.6
3,975,084	+				-2.3
3,975,085	-				-0.6
3,975,185	-				+0.5
3,975,278	-		CA265_RS15790	0.24	+1.0
3,975,347	-		CA265_RS15790	0.36	-0.1
3,975,566	-		CA265_RS15790	0.74	+0.4
3,975,577	+		CA265_RS15790	0.76	-0.3
3,975,749	+				-2.8
3,975,756	+				-0.8
3,975,786	+				-1.9
3,975,787	-				+2.0
3,975,986	-				+1.7
3,975,995	-				+3.0
3,975,995	-				+5.5
3,976,028	-				+1.4