Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS10600

Experiment: R2A with D-Cycloserine 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.2 mg/ml
2,621,530	+		CA265_RS10595	0.41	+1.8
2,621,532	+		CA265_RS10595	0.41	+2.4
2,621,533	-		CA265_RS10595	0.41	+1.6
2,621,538	-		CA265_RS10595	0.41	+1.2
2,621,546	-		CA265_RS10595	0.42	+0.7
2,621,549	-		CA265_RS10595	0.42	-0.5
2,621,555	-		CA265_RS10595	0.43	+1.1
2,621,621	+		CA265_RS10595	0.47	+2.5
2,621,622	-		CA265_RS10595	0.47	+0.7
2,621,684	-		CA265_RS10595	0.52	+0.1
2,621,855	-		CA265_RS10595	0.64	+0.6
2,621,979	+		CA265_RS10595	0.73	+5.0
2,622,049	+		CA265_RS10595	0.78	+1.8
2,622,163	-		CA265_RS10595	0.87	-0.8
2,622,239	-				+0.8
2,622,239	-				+1.4
2,622,241	-				-0.2
2,622,385	-				-1.7
2,622,390	-				-1.1
2,622,482	+				+0.0
2,622,493	+				-1.1
2,622,493	+				-0.6
2,622,495	+				-0.7
2,622,495	+				-1.4
2,622,525	+				-0.5
2,622,525	+				-1.2
2,622,570	+		CA265_RS10600	0.13	-1.5
2,622,581	+		CA265_RS10600	0.15	-1.6
2,622,583	+		CA265_RS10600	0.15	-0.3
2,622,715	-		CA265_RS10600	0.42	-0.2
2,622,719	+		CA265_RS10600	0.43	-1.1
2,622,719	+		CA265_RS10600	0.43	-1.6
2,622,756	+		CA265_RS10600	0.50	-0.7
2,622,763	+		CA265_RS10600	0.52	-1.1
2,622,783	+		CA265_RS10600	0.56	-0.1
2,622,826	+		CA265_RS10600	0.64	-1.4
2,622,869	-		CA265_RS10600	0.73	-1.4
2,622,893	+		CA265_RS10600	0.78	-1.7
2,622,959	-				-2.0
2,622,959	-				-1.1
2,622,978	+				-0.5
2,622,979	-				-1.4
2,623,594	-				-2.6
2,623,665	+				-0.2
2,623,874	+		CA265_RS10610	0.24	+0.6
2,623,875	-		CA265_RS10610	0.24	-1.3
2,623,875	-		CA265_RS10610	0.24	-1.2
2,623,876	+		CA265_RS10610	0.24	+0.3
2,623,877	-		CA265_RS10610	0.24	-1.0
2,623,877	-		CA265_RS10610	0.24	+0.5
2,623,877	-				-0.5
2,623,880	+		CA265_RS10610	0.25	+0.6
2,623,881	-		CA265_RS10610	0.25	-2.2
2,623,915	+		CA265_RS10610	0.32	-0.2
2,623,916	-		CA265_RS10610	0.32	-0.4
2,623,916	-		CA265_RS10610	0.32	-0.0
2,623,933	-		CA265_RS10610	0.35	-1.4
2,623,959	+		CA265_RS10610	0.40	+1.1