Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS10415

Experiment: R2A with D-Cycloserine 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.2 mg/ml
2,576,163	-				+1.0
2,576,170	+				+0.8
2,576,171	-				+0.5
2,576,178	+				+0.4
2,576,281	+				-0.5
2,576,281	+				+0.2
2,576,281	+				+0.3
2,576,288	-				+0.4
2,576,288	-				+1.5
2,576,312	+				-0.3
2,576,346	+				+0.4
2,576,347	-				+0.1
2,576,347	-				+0.9
2,576,446	-		CA265_RS10410	0.16	+0.2
2,576,476	-		CA265_RS10410	0.21	-0.5
2,576,476	-		CA265_RS10410	0.21	-0.3
2,576,496	+		CA265_RS10410	0.24	+0.3
2,576,544	-		CA265_RS10410	0.32	+0.0
2,576,597	+		CA265_RS10410	0.41	+0.0
2,576,606	+		CA265_RS10410	0.42	+0.2
2,576,606	+		CA265_RS10410	0.42	+0.1
2,576,644	+		CA265_RS10410	0.49	+0.3
2,576,680	-		CA265_RS10410	0.54	-0.4
2,576,687	-		CA265_RS10410	0.56	+0.5
2,576,869	+		CA265_RS10410	0.85	+0.2
2,576,941	+				-0.2
2,576,997	+				+0.6
2,577,004	+				+0.4
2,577,129	-				+0.3
2,577,160	-		CA265_RS10415	0.10	+1.1
2,577,164	+		CA265_RS10415	0.11	+0.2
2,577,181	-		CA265_RS10415	0.13	-0.2
2,577,216	+		CA265_RS10415	0.17	+0.6
2,577,236	+		CA265_RS10415	0.20	+1.2
2,577,237	-		CA265_RS10415	0.20	+0.4
2,577,256	-		CA265_RS10415	0.22	+0.1
2,577,277	-		CA265_RS10415	0.25	+0.5
2,577,277	-		CA265_RS10415	0.25	+1.2
2,577,279	+		CA265_RS10415	0.25	+0.8
2,577,279	-		CA265_RS10415	0.25	+0.2
2,577,303	-		CA265_RS10415	0.28	+0.8
2,577,345	+		CA265_RS10415	0.34	+1.5
2,577,346	-		CA265_RS10415	0.34	+0.1
2,577,435	-		CA265_RS10415	0.45	+1.1
2,577,435	-		CA265_RS10415	0.45	+1.2
2,577,445	-		CA265_RS10415	0.46	+2.7
2,577,453	+		CA265_RS10415	0.47	+0.4
2,577,454	-		CA265_RS10415	0.47	-0.1
2,577,454	-		CA265_RS10415	0.47	+0.3
2,577,560	+		CA265_RS10415	0.60	-0.2
2,577,584	+		CA265_RS10415	0.63	+2.5
2,577,585	-		CA265_RS10415	0.64	-0.2
2,577,614	+		CA265_RS10415	0.67	+1.2
2,577,619	-		CA265_RS10415	0.68	+0.7
2,577,622	+		CA265_RS10415	0.68	+1.2
2,577,645	-		CA265_RS10415	0.71	-0.2
2,577,647	+		CA265_RS10415	0.71	+0.3
2,577,779	+		CA265_RS10415	0.88	+0.4
2,577,779	+		CA265_RS10415	0.88	+0.7
2,577,779	+		CA265_RS10415	0.88	+2.7
2,577,779	+		CA265_RS10415	0.88	+0.3
2,577,779	+		CA265_RS10415	0.88	+0.7
2,577,787	-		CA265_RS10415	0.89	+1.2
2,577,805	-				+1.0
2,577,885	+				+0.7
2,577,970	+				-0.4
2,577,982	-				+1.0
2,578,023	+				-0.1
2,578,023	+				-0.1
2,578,024	-				-1.0
2,578,024	-				+0.2
2,578,133	+		CA265_RS10420	0.16	+0.2
2,578,152	-		CA265_RS10420	0.18	+1.2
2,578,260	-		CA265_RS10420	0.29	+0.3
2,578,287	+		CA265_RS10420	0.31	-1.2
2,578,288	-		CA265_RS10420	0.31	+0.3
2,578,288	-		CA265_RS10420	0.31	-0.6
2,578,352	+		CA265_RS10420	0.38	-1.1
2,578,411	+		CA265_RS10420	0.44	-0.1
2,578,411	+		CA265_RS10420	0.44	-0.1
2,578,412	-		CA265_RS10420	0.44	+0.4
2,578,602	-		CA265_RS10420	0.63	+0.4
2,578,603	+		CA265_RS10420	0.63	-0.4
2,578,631	+		CA265_RS10420	0.66	-0.4
2,578,733	+		CA265_RS10420	0.76	+0.1
2,578,787	+		CA265_RS10420	0.81	+0.2
2,578,788	-		CA265_RS10420	0.81	+0.0
2,578,806	-		CA265_RS10420	0.83	+0.9
2,578,811	+		CA265_RS10420	0.83	-0.3
2,578,818	+		CA265_RS10420	0.84	+0.8