Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS09520

Experiment: R2A with D-Cycloserine 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.2 mg/ml
2,357,127	+				-0.0
2,357,181	-				-0.8
2,357,660	-				-0.2
2,357,661	+				+0.3
2,357,662	-				-0.2
2,357,663	-				+0.3
2,357,669	+				-0.7
2,357,721	+				-0.3
2,357,723	+				-1.4
2,357,804	+		CA265_RS09520	0.11	-1.5
2,357,856	-		CA265_RS09520	0.17	-1.3
2,357,857	+		CA265_RS09520	0.17	-2.8
2,357,873	-		CA265_RS09520	0.19	-0.6
2,357,882	+		CA265_RS09520	0.20	-0.1
2,357,944	+		CA265_RS09520	0.26	-1.0
2,357,961	+		CA265_RS09520	0.28	-0.6
2,357,965	+		CA265_RS09520	0.29	-0.3
2,357,966	-		CA265_RS09520	0.29	-1.8
2,358,082	+		CA265_RS09520	0.42	-2.0
2,358,083	-		CA265_RS09520	0.42	-1.7
2,358,083	-		CA265_RS09520	0.42	-1.3
2,358,130	+		CA265_RS09520	0.47	-0.7
2,358,135	+		CA265_RS09520	0.48	+0.0
2,358,301	+		CA265_RS09520	0.66	-2.4
2,358,302	-		CA265_RS09520	0.66	-0.5
2,358,308	+		CA265_RS09520	0.67	-0.3
2,358,308	+		CA265_RS09520	0.67	-1.0
2,358,371	+		CA265_RS09520	0.74	-2.2
2,358,474	-		CA265_RS09520	0.85	-1.0
2,358,500	-		CA265_RS09520	0.88	-1.7
2,358,528	-				-1.2
2,358,528	-				-0.6
2,358,528	-				-0.4
2,358,530	+				-1.8
2,358,545	+				-0.7
2,358,564	+				-0.4
2,358,604	-				+2.1
2,358,610	-				+1.5
2,358,652	-				+0.5
2,358,652	-				-0.5
2,358,695	-				-2.1
2,358,709	+				-0.6
2,358,852	+				+1.3
2,358,916	+		CA265_RS09525	0.17	+1.8
2,358,942	-		CA265_RS09525	0.20	+0.8
2,358,963	-		CA265_RS09525	0.22	+0.6
2,358,963	-		CA265_RS09525	0.22	+1.0
2,358,969	-		CA265_RS09525	0.23	+1.2
2,358,969	-		CA265_RS09525	0.23	+2.0
2,358,976	-		CA265_RS09525	0.24	+1.1
2,359,043	+		CA265_RS09525	0.31	+1.3
2,359,079	+		CA265_RS09525	0.35	+2.0
2,359,091	+		CA265_RS09525	0.37	+1.7
2,359,179	+		CA265_RS09525	0.47	+1.6
2,359,215	+		CA265_RS09525	0.51	+1.9
2,359,230	+		CA265_RS09525	0.52	+1.1
2,359,241	+		CA265_RS09525	0.54	+2.2
2,359,376	+		CA265_RS09525	0.69	+2.0
2,359,442	+		CA265_RS09525	0.76	+1.5
2,359,548	+		CA265_RS09525	0.88	+1.0
2,359,600	+				+0.6
2,359,601	-				+2.4
2,359,602	+				+1.5