Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS07385

Experiment: R2A with D-Cycloserine 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.2 mg/ml
1,861,621	-		CA265_RS07380	0.74	+0.0
1,861,624	+		CA265_RS07380	0.74	-0.4
1,861,625	-				+1.5
1,861,643	+		CA265_RS07380	0.75	+0.2
1,861,649	+		CA265_RS07380	0.75	-0.3
1,861,719	-		CA265_RS07380	0.78	+0.4
1,861,774	+		CA265_RS07380	0.80	-1.1
1,861,774	+		CA265_RS07380	0.80	-0.7
1,861,775	-		CA265_RS07380	0.80	+0.5
1,861,775	-		CA265_RS07380	0.80	-0.3
1,861,782	+		CA265_RS07380	0.81	+0.8
1,861,814	+		CA265_RS07380	0.82	-1.1
1,861,815	-		CA265_RS07380	0.82	-0.1
1,861,875	-		CA265_RS07380	0.84	+0.6
1,861,936	+		CA265_RS07380	0.87	-0.8
1,861,942	+		CA265_RS07380	0.87	+0.4
1,861,959	-		CA265_RS07380	0.88	-0.1
1,862,041	+				-0.1
1,862,041	+				+0.8
1,862,042	-				+0.2
1,862,042	-				+0.2
1,862,046	+				+0.9
1,862,047	-				-1.2
1,862,181	-				+0.5
1,862,249	-				-0.4
1,862,258	+				+0.3
1,862,259	-				-0.4
1,862,288	-				-1.8
1,862,288	-				+0.8
1,862,301	+				-1.3
1,862,301	+				-0.1
1,862,302	-				-0.5
1,862,348	-				-0.2
1,862,383	+				-0.7
1,862,384	-				+0.8
1,862,384	-				-0.8
1,862,453	-				-0.8
1,862,489	+				-0.2
1,862,496	+				-0.3
1,862,519	+				+0.9
1,862,538	-				+0.3
1,862,574	-				-0.4
1,862,588	+				-0.2
1,862,674	-		CA265_RS07385	0.18	-0.3
1,862,723	+		CA265_RS07385	0.29	-0.4
1,862,740	-		CA265_RS07385	0.33	-0.6
1,862,801	+		CA265_RS07385	0.46	-0.0
1,862,832	+		CA265_RS07385	0.54	-0.8
1,862,872	+		CA265_RS07385	0.63	+0.4
1,862,872	+		CA265_RS07385	0.63	-3.0
1,862,934	-		CA265_RS07385	0.77	-1.2
1,862,954	+		CA265_RS07385	0.81	+0.1
1,862,999	+				-0.2
1,863,000	-				-0.3
1,863,048	+				-0.1
1,863,100	-				-1.3
1,863,230	+		CA265_RS07390	0.38	+0.2
1,863,230	+		CA265_RS07390	0.38	-0.2
1,863,231	-		CA265_RS07390	0.39	-0.7
1,863,274	-		CA265_RS07390	0.56	+1.9
1,863,333	+		CA265_RS07390	0.81	+0.8
1,863,334	-		CA265_RS07390	0.81	-0.4
1,863,449	+				+0.2
1,863,494	+				+2.7
1,863,512	+				+3.8
1,863,526	+				+3.3
1,863,550	-				+0.3
1,863,589	+				+0.5
1,863,622	-				+0.2
1,863,649	+				+0.5
1,863,649	+				+0.8
1,863,746	+				-0.3
1,863,761	+				+0.2
1,863,787	+				-0.7
1,863,808	+				+1.3
1,863,808	+				+0.6
1,863,849	-				-0.5
1,863,889	-		CA265_RS07395	0.10	+1.0
1,863,894	-		CA265_RS07395	0.10	-0.5
1,863,912	+		CA265_RS07395	0.11	-0.1
1,863,913	-		CA265_RS07395	0.11	-1.2
1,863,913	-		CA265_RS07395	0.11	-1.2
1,863,966	-		CA265_RS07395	0.13	-0.3
1,863,986	-		CA265_RS07395	0.13	-0.1