Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS07330

Experiment: R2A with D-Cycloserine 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.2 mg/ml
1,847,608	+		CA265_RS07325	0.23	-1.0
1,847,613	+		CA265_RS07325	0.24	-0.2
1,847,674	-		CA265_RS07325	0.30	+0.8
1,847,702	+		CA265_RS07325	0.33	+0.2
1,847,714	-		CA265_RS07325	0.35	+0.5
1,847,748	+		CA265_RS07325	0.39	-0.1
1,847,749	-		CA265_RS07325	0.39	-0.3
1,847,751	+		CA265_RS07325	0.39	+0.2
1,847,839	-		CA265_RS07325	0.49	-0.4
1,847,839	-		CA265_RS07325	0.49	+0.7
1,847,917	+		CA265_RS07325	0.57	+0.3
1,847,918	-		CA265_RS07325	0.58	+0.5
1,847,967	-		CA265_RS07325	0.63	+1.5
1,848,072	-		CA265_RS07325	0.75	+2.1
1,848,072	-		CA265_RS07325	0.75	+0.6
1,848,140	+		CA265_RS07325	0.82	-0.1
1,848,196	+		CA265_RS07325	0.89	-0.4
1,848,204	+		CA265_RS07325	0.89	-0.5
1,848,205	-		CA265_RS07325	0.90	+0.1
1,848,315	-				-0.8
1,848,365	+				-0.3
1,848,431	-				+0.3
1,848,447	+				+0.1
1,848,448	-				+0.1
1,848,453	-				-0.9
1,848,486	-				+0.3
1,848,531	+				-0.2
1,848,543	-				+0.9
1,848,546	+				+0.7
1,848,549	-				-0.0
1,848,555	-				+0.8
1,848,600	+				-0.2
1,848,721	+		CA265_RS07330	0.32	-0.3
1,848,722	-		CA265_RS07330	0.33	-0.5
1,848,722	-		CA265_RS07330	0.33	+0.4
1,848,868	-		CA265_RS07330	0.73	+1.0
1,848,875	-		CA265_RS07330	0.75	+1.0
1,848,934	+				-0.1
1,848,973	-				-0.8
1,848,990	+				+0.5
1,848,990	+				-0.7
1,848,991	-				-0.6
1,849,039	-				-1.8
1,849,071	+				-0.1
1,849,071	+				+0.4
1,849,078	-				-0.1
1,849,134	-				+0.8
1,849,145	-				+0.1
1,849,150	+				-0.3
1,849,171	+				+0.9
1,849,185	+				+1.0
1,849,220	-				-1.3
1,849,324	+		CA265_RS07335	0.26	-0.0
1,849,324	+		CA265_RS07335	0.26	-0.4
1,849,371	-		CA265_RS07335	0.38	+0.6
1,849,393	+		CA265_RS07335	0.43	-0.1
1,849,519	+		CA265_RS07335	0.75	+1.4
1,849,547	-		CA265_RS07335	0.82	+0.2
1,849,597	+				-0.4
1,849,613	+				+0.2
1,849,634	-				+0.6
1,849,637	+				-0.2
1,849,641	+				+0.4
1,849,757	+				-0.1
1,849,757	+				+0.8
1,849,758	-				-1.5
1,849,758	-				+0.0
1,849,770	+				+0.3
1,849,778	+				-0.1
1,849,792	-				+0.5
1,849,795	+				-0.3
1,849,796	-				-0.0
1,849,797	+				-1.0
1,849,821	-		CA265_RS07340	0.11	-0.3
1,849,889	+		CA265_RS07340	0.17	+0.1
1,849,890	-		CA265_RS07340	0.17	-0.0
1,849,920	-		CA265_RS07340	0.20	+0.2