Experiment: R2A with D-Cycloserine 0.2 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA265_RS03210 and CA265_RS03215 are separated by 106 nucleotides CA265_RS03215 and CA265_RS03220 are separated by 92 nucleotides
CA265_RS03210: CA265_RS03210 - hypothetical protein, at 789,543 to 790,385
_RS03210
CA265_RS03215: CA265_RS03215 - mutarotase, at 790,492 to 791,175
_RS03215
CA265_RS03220: CA265_RS03220 - glycine--tRNA ligase, at 791,268 to 792,911
_RS03220
Position (kb) 790
791
792 Strain fitness (log2 ratio) -1
0
1 at 789.497 kb on + strand at 789.498 kb on - strand at 789.515 kb on + strand at 789.522 kb on + strand at 789.545 kb on - strand at 789.672 kb on - strand, within CA265_RS03210 at 789.672 kb on - strand, within CA265_RS03210 at 789.684 kb on + strand, within CA265_RS03210 at 789.738 kb on - strand, within CA265_RS03210 at 789.794 kb on + strand, within CA265_RS03210 at 789.795 kb on - strand, within CA265_RS03210 at 789.875 kb on + strand, within CA265_RS03210 at 789.921 kb on - strand, within CA265_RS03210 at 789.925 kb on - strand, within CA265_RS03210 at 789.947 kb on + strand, within CA265_RS03210 at 789.950 kb on + strand, within CA265_RS03210 at 789.951 kb on - strand, within CA265_RS03210 at 789.973 kb on - strand, within CA265_RS03210 at 789.988 kb on + strand, within CA265_RS03210 at 790.123 kb on - strand, within CA265_RS03210 at 790.362 kb on + strand at 790.381 kb on + strand at 790.405 kb on - strand at 790.405 kb on - strand at 790.490 kb on + strand at 790.511 kb on - strand at 790.545 kb on - strand at 790.554 kb on + strand at 790.557 kb on - strand at 790.633 kb on - strand, within CA265_RS03215 at 790.637 kb on - strand, within CA265_RS03215 at 790.672 kb on - strand, within CA265_RS03215 at 790.692 kb on + strand, within CA265_RS03215 at 790.870 kb on - strand, within CA265_RS03215 at 790.878 kb on + strand, within CA265_RS03215 at 790.881 kb on - strand, within CA265_RS03215 at 790.881 kb on - strand, within CA265_RS03215 at 790.896 kb on + strand, within CA265_RS03215 at 790.904 kb on - strand, within CA265_RS03215 at 790.932 kb on + strand, within CA265_RS03215 at 790.933 kb on - strand, within CA265_RS03215 at 790.940 kb on - strand, within CA265_RS03215 at 790.973 kb on + strand, within CA265_RS03215 at 790.974 kb on - strand, within CA265_RS03215 at 791.145 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction R2A with D-Cycloserine 0.2 mg/ml remove 789,497 + +1.0 789,498 - -0.9 789,515 + +0.2 789,522 + +0.4 789,545 - -0.2 789,672 - CA265_RS03210 0.15 +0.7 789,672 - CA265_RS03210 0.15 -0.3 789,684 + CA265_RS03210 0.17 -0.6 789,738 - CA265_RS03210 0.23 -1.0 789,794 + CA265_RS03210 0.30 -0.4 789,795 - CA265_RS03210 0.30 +0.6 789,875 + CA265_RS03210 0.39 +0.8 789,921 - CA265_RS03210 0.45 +1.1 789,925 - CA265_RS03210 0.45 +0.4 789,947 + CA265_RS03210 0.48 -0.1 789,950 + CA265_RS03210 0.48 -0.1 789,951 - CA265_RS03210 0.48 -0.2 789,973 - CA265_RS03210 0.51 -0.6 789,988 + CA265_RS03210 0.53 -1.7 790,123 - CA265_RS03210 0.69 +0.6 790,362 + +0.3 790,381 + +1.0 790,405 - +0.5 790,405 - -0.6 790,490 + -0.5 790,511 - -0.2 790,545 - +0.4 790,554 + +0.4 790,557 - -0.7 790,633 - CA265_RS03215 0.21 -0.2 790,637 - CA265_RS03215 0.21 +0.5 790,672 - CA265_RS03215 0.26 -0.2 790,692 + CA265_RS03215 0.29 +1.0 790,870 - CA265_RS03215 0.55 -0.6 790,878 + CA265_RS03215 0.56 +0.5 790,881 - CA265_RS03215 0.57 +0.8 790,881 - CA265_RS03215 0.57 +0.0 790,896 + CA265_RS03215 0.59 +0.5 790,904 - CA265_RS03215 0.60 +0.3 790,932 + CA265_RS03215 0.64 +1.0 790,933 - CA265_RS03215 0.64 +0.2 790,940 - CA265_RS03215 0.65 +0.4 790,973 + CA265_RS03215 0.70 +0.5 790,974 - CA265_RS03215 0.70 +0.8 791,145 - -0.2
Or see this region's nucleotide sequence