Strain Fitness in Azospirillum brasilense Sp245 around AZOBR_RS31145

Experiment: pyruvate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAZOBR_RS31140 and AZOBR_RS31145 are separated by 4 nucleotidesAZOBR_RS31145 and AZOBR_RS31150 are separated by 199 nucleotides AZOBR_RS31140: AZOBR_RS31140 - beta-lactamase, at 351,941 to 353,023 _RS31140 AZOBR_RS31145: AZOBR_RS31145 - chemotaxis protein, at 353,028 to 353,600 _RS31145 AZOBR_RS31150: AZOBR_RS31150 - putative Cold-shock DNA-binding protein (fragment), at 353,800 to 354,255 _RS31150 Position (kb) 353 354Strain fitness (log2 ratio) -2 -1 0 1 2at 352.320 kb on - strand, within AZOBR_RS31140at 352.425 kb on - strand, within AZOBR_RS31140at 352.425 kb on - strand, within AZOBR_RS31140at 352.425 kb on - strand, within AZOBR_RS31140at 352.439 kb on + strand, within AZOBR_RS31140at 352.637 kb on + strand, within AZOBR_RS31140at 352.637 kb on + strand, within AZOBR_RS31140at 352.637 kb on + strand, within AZOBR_RS31140at 352.638 kb on - strand, within AZOBR_RS31140at 352.856 kb on + strand, within AZOBR_RS31140at 352.901 kb on + strand, within AZOBR_RS31140at 353.089 kb on + strand, within AZOBR_RS31145at 353.089 kb on + strand, within AZOBR_RS31145at 353.090 kb on - strand, within AZOBR_RS31145at 353.090 kb on - strand, within AZOBR_RS31145at 353.239 kb on + strand, within AZOBR_RS31145at 353.239 kb on + strand, within AZOBR_RS31145at 353.240 kb on - strand, within AZOBR_RS31145at 353.240 kb on - strand, within AZOBR_RS31145at 353.575 kb on + strandat 353.575 kb on + strandat 353.576 kb on - strandat 353.576 kb on - strandat 353.576 kb on - strandat 353.576 kb on - strandat 353.600 kb on - strandat 353.600 kb on - strandat 353.729 kb on + strandat 353.753 kb on - strandat 354.513 kb on + strandat 354.537 kb on + strandat 354.537 kb on + strandat 354.538 kb on - strandat 354.538 kb on - strandat 354.538 kb on - strandat 354.538 kb on - strandat 354.538 kb on - strandat 354.538 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction pyruvate (C)
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352,320 - AZOBR_RS31140 0.35 -0.3
352,425 - AZOBR_RS31140 0.45 +0.7
352,425 - AZOBR_RS31140 0.45 -0.3
352,425 - AZOBR_RS31140 0.45 -0.5
352,439 + AZOBR_RS31140 0.46 +0.4
352,637 + AZOBR_RS31140 0.64 -0.0
352,637 + AZOBR_RS31140 0.64 -0.1
352,637 + AZOBR_RS31140 0.64 +0.2
352,638 - AZOBR_RS31140 0.64 -0.2
352,856 + AZOBR_RS31140 0.84 +0.1
352,901 + AZOBR_RS31140 0.89 -0.1
353,089 + AZOBR_RS31145 0.11 +0.1
353,089 + AZOBR_RS31145 0.11 +0.2
353,090 - AZOBR_RS31145 0.11 -0.8
353,090 - AZOBR_RS31145 0.11 +1.1
353,239 + AZOBR_RS31145 0.37 +0.5
353,239 + AZOBR_RS31145 0.37 -0.2
353,240 - AZOBR_RS31145 0.37 -0.3
353,240 - AZOBR_RS31145 0.37 +0.2
353,575 + +1.3
353,575 + +1.9
353,576 - -0.3
353,576 - -0.4
353,576 - +1.6
353,576 - -0.1
353,600 - +2.1
353,600 - -2.0
353,729 + -0.9
353,753 - -0.2
354,513 + +0.4
354,537 + -0.6
354,537 + +0.5
354,538 - -0.3
354,538 - -0.3
354,538 - -0.1
354,538 - -0.7
354,538 - -0.1
354,538 - +0.1

Or see this region's nucleotide sequence