Experiment: pyruvate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS05760 and AZOBR_RS05765 are separated by 16 nucleotides AZOBR_RS05765 and AZOBR_RS05770 are separated by 103 nucleotides
AZOBR_RS05760: AZOBR_RS05760 - hypothetical protein, at 1,221,254 to 1,222,294
_RS05760
AZOBR_RS05765: AZOBR_RS05765 - hypothetical protein, at 1,222,311 to 1,222,976
_RS05765
AZOBR_RS05770: AZOBR_RS05770 - 2-hydroxyacid dehydrogenase, at 1,223,080 to 1,224,468
_RS05770
Position (kb) 1222
1223 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 1221.462 kb on - strand, within AZOBR_RS05760 at 1221.530 kb on + strand, within AZOBR_RS05760 at 1221.530 kb on + strand, within AZOBR_RS05760 at 1221.569 kb on + strand, within AZOBR_RS05760 at 1221.570 kb on - strand, within AZOBR_RS05760 at 1221.650 kb on + strand, within AZOBR_RS05760 at 1221.651 kb on - strand, within AZOBR_RS05760 at 1221.671 kb on + strand, within AZOBR_RS05760 at 1221.671 kb on + strand, within AZOBR_RS05760 at 1221.716 kb on + strand, within AZOBR_RS05760 at 1221.716 kb on + strand, within AZOBR_RS05760 at 1221.716 kb on + strand, within AZOBR_RS05760 at 1221.716 kb on + strand, within AZOBR_RS05760 at 1221.717 kb on - strand, within AZOBR_RS05760 at 1221.717 kb on - strand, within AZOBR_RS05760 at 1221.881 kb on + strand, within AZOBR_RS05760 at 1221.881 kb on + strand, within AZOBR_RS05760 at 1221.881 kb on + strand, within AZOBR_RS05760 at 1221.882 kb on - strand, within AZOBR_RS05760 at 1221.882 kb on - strand, within AZOBR_RS05760 at 1222.043 kb on + strand, within AZOBR_RS05760 at 1222.043 kb on + strand, within AZOBR_RS05760 at 1222.043 kb on + strand, within AZOBR_RS05760 at 1222.043 kb on + strand, within AZOBR_RS05760 at 1222.044 kb on - strand, within AZOBR_RS05760 at 1222.044 kb on - strand, within AZOBR_RS05760 at 1222.044 kb on - strand, within AZOBR_RS05760 at 1222.044 kb on - strand, within AZOBR_RS05760 at 1222.313 kb on - strand at 1222.313 kb on - strand at 1222.781 kb on - strand, within AZOBR_RS05765 at 1222.781 kb on - strand, within AZOBR_RS05765 at 1222.781 kb on - strand, within AZOBR_RS05765 at 1222.784 kb on - strand, within AZOBR_RS05765 at 1223.651 kb on + strand, within AZOBR_RS05770 at 1223.651 kb on + strand, within AZOBR_RS05770 at 1223.652 kb on - strand, within AZOBR_RS05770 at 1223.652 kb on - strand, within AZOBR_RS05770 at 1223.652 kb on - strand, within AZOBR_RS05770 at 1223.652 kb on - strand, within AZOBR_RS05770 at 1223.652 kb on - strand, within AZOBR_RS05770
Per-strain Table
Position Strand Gene LocusTag Fraction pyruvate (C) remove 1,221,462 - AZOBR_RS05760 0.20 +0.3 1,221,530 + AZOBR_RS05760 0.27 -1.4 1,221,530 + AZOBR_RS05760 0.27 -0.5 1,221,569 + AZOBR_RS05760 0.30 -0.3 1,221,570 - AZOBR_RS05760 0.30 -0.8 1,221,650 + AZOBR_RS05760 0.38 -1.8 1,221,651 - AZOBR_RS05760 0.38 -1.0 1,221,671 + AZOBR_RS05760 0.40 -0.5 1,221,671 + AZOBR_RS05760 0.40 -0.4 1,221,716 + AZOBR_RS05760 0.44 -0.5 1,221,716 + AZOBR_RS05760 0.44 -0.7 1,221,716 + AZOBR_RS05760 0.44 -1.7 1,221,716 + AZOBR_RS05760 0.44 +0.7 1,221,717 - AZOBR_RS05760 0.44 -0.9 1,221,717 - AZOBR_RS05760 0.44 +0.1 1,221,881 + AZOBR_RS05760 0.60 -0.7 1,221,881 + AZOBR_RS05760 0.60 -2.5 1,221,881 + AZOBR_RS05760 0.60 -1.0 1,221,882 - AZOBR_RS05760 0.60 -0.5 1,221,882 - AZOBR_RS05760 0.60 -1.0 1,222,043 + AZOBR_RS05760 0.76 -1.1 1,222,043 + AZOBR_RS05760 0.76 -0.9 1,222,043 + AZOBR_RS05760 0.76 -0.6 1,222,043 + AZOBR_RS05760 0.76 -0.5 1,222,044 - AZOBR_RS05760 0.76 +0.1 1,222,044 - AZOBR_RS05760 0.76 -1.0 1,222,044 - AZOBR_RS05760 0.76 -1.8 1,222,044 - AZOBR_RS05760 0.76 -0.6 1,222,313 - +0.1 1,222,313 - -2.2 1,222,781 - AZOBR_RS05765 0.71 -0.2 1,222,781 - AZOBR_RS05765 0.71 -0.6 1,222,781 - AZOBR_RS05765 0.71 +0.4 1,222,784 - AZOBR_RS05765 0.71 -3.0 1,223,651 + AZOBR_RS05770 0.41 -3.1 1,223,651 + AZOBR_RS05770 0.41 -4.7 1,223,652 - AZOBR_RS05770 0.41 -2.3 1,223,652 - AZOBR_RS05770 0.41 -1.6 1,223,652 - AZOBR_RS05770 0.41 -2.9 1,223,652 - AZOBR_RS05770 0.41 -1.1 1,223,652 - AZOBR_RS05770 0.41 -3.8
Or see this region's nucleotide sequence