Experiment: Cisplatin 0.006 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_25035 and AO353_25040 overlap by 26 nucleotides AO353_25040 and AO353_25045 are separated by 282 nucleotides
AO353_25035: AO353_25035 - integrase, at 5,520,920 to 5,521,888
_25035
AO353_25040: AO353_25040 - hypothetical protein, at 5,521,863 to 5,522,327
_25040
AO353_25045: AO353_25045 - AraC family transcriptional regulator, at 5,522,610 to 5,523,713
_25045
Position (kb)
5521
5522
5523 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 5520.936 kb on + strand at 5520.936 kb on + strand at 5520.937 kb on - strand at 5520.937 kb on - strand at 5521.338 kb on + strand, within AO353_25035 at 5521.464 kb on + strand, within AO353_25035 at 5521.472 kb on + strand, within AO353_25035 at 5521.472 kb on + strand, within AO353_25035 at 5521.655 kb on + strand, within AO353_25035 at 5521.655 kb on + strand, within AO353_25035 at 5521.656 kb on - strand, within AO353_25035 at 5521.656 kb on - strand, within AO353_25035 at 5521.656 kb on - strand, within AO353_25035 at 5521.656 kb on - strand, within AO353_25035 at 5521.656 kb on - strand, within AO353_25035 at 5521.698 kb on + strand, within AO353_25035 at 5521.698 kb on + strand, within AO353_25035 at 5521.699 kb on - strand, within AO353_25035 at 5521.699 kb on - strand, within AO353_25035 at 5521.699 kb on - strand, within AO353_25035 at 5521.699 kb on - strand, within AO353_25035 at 5521.818 kb on + strand at 5521.818 kb on + strand at 5521.818 kb on + strand at 5521.819 kb on - strand at 5521.864 kb on + strand at 5521.864 kb on + strand at 5521.864 kb on + strand at 5521.886 kb on + strand at 5522.355 kb on - strand at 5522.364 kb on - strand at 5522.382 kb on + strand at 5522.383 kb on - strand at 5522.384 kb on + strand at 5522.384 kb on + strand at 5522.419 kb on - strand at 5522.445 kb on + strand at 5522.446 kb on - strand at 5522.556 kb on - strand at 5522.556 kb on - strand at 5522.596 kb on + strand at 5522.633 kb on + strand at 5522.634 kb on - strand at 5522.671 kb on + strand at 5522.727 kb on - strand, within AO353_25045 at 5522.757 kb on + strand, within AO353_25045 at 5522.757 kb on + strand, within AO353_25045 at 5522.879 kb on + strand, within AO353_25045 at 5522.879 kb on + strand, within AO353_25045 at 5522.880 kb on - strand, within AO353_25045 at 5522.880 kb on - strand, within AO353_25045 at 5522.880 kb on - strand, within AO353_25045 at 5522.880 kb on - strand, within AO353_25045 at 5522.881 kb on + strand, within AO353_25045 at 5522.881 kb on + strand, within AO353_25045 at 5522.882 kb on - strand, within AO353_25045 at 5522.882 kb on - strand, within AO353_25045 at 5522.882 kb on - strand, within AO353_25045 at 5522.882 kb on - strand, within AO353_25045 at 5522.914 kb on + strand, within AO353_25045 at 5522.914 kb on + strand, within AO353_25045 at 5522.914 kb on + strand, within AO353_25045 at 5522.914 kb on + strand, within AO353_25045 at 5522.914 kb on + strand, within AO353_25045 at 5522.915 kb on - strand, within AO353_25045 at 5522.915 kb on - strand, within AO353_25045 at 5522.915 kb on - strand, within AO353_25045 at 5522.915 kb on - strand, within AO353_25045 at 5522.915 kb on - strand, within AO353_25045 at 5522.915 kb on - strand, within AO353_25045 at 5522.915 kb on - strand, within AO353_25045 at 5522.915 kb on - strand, within AO353_25045 at 5523.148 kb on + strand, within AO353_25045 at 5523.210 kb on + strand, within AO353_25045 at 5523.211 kb on - strand, within AO353_25045 at 5523.211 kb on - strand, within AO353_25045 at 5523.211 kb on - strand, within AO353_25045 at 5523.260 kb on + strand, within AO353_25045 at 5523.260 kb on + strand, within AO353_25045 at 5523.260 kb on + strand, within AO353_25045 at 5523.260 kb on + strand, within AO353_25045 at 5523.260 kb on + strand, within AO353_25045 at 5523.260 kb on + strand, within AO353_25045 at 5523.261 kb on - strand, within AO353_25045 at 5523.261 kb on - strand, within AO353_25045 at 5523.261 kb on - strand, within AO353_25045 at 5523.261 kb on - strand, within AO353_25045 at 5523.261 kb on - strand, within AO353_25045 at 5523.261 kb on - strand, within AO353_25045 at 5523.295 kb on + strand, within AO353_25045 at 5523.296 kb on - strand, within AO353_25045 at 5523.319 kb on + strand, within AO353_25045 at 5523.320 kb on - strand, within AO353_25045
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.006 mg/ml remove 5,520,936 + -0.4 5,520,936 + -2.8 5,520,937 - +0.6 5,520,937 - -1.4 5,521,338 + AO353_25035 0.43 -0.4 5,521,464 + AO353_25035 0.56 +0.6 5,521,472 + AO353_25035 0.57 -3.0 5,521,472 + AO353_25035 0.57 -2.8 5,521,655 + AO353_25035 0.76 -0.4 5,521,655 + AO353_25035 0.76 -2.4 5,521,656 - AO353_25035 0.76 -2.4 5,521,656 - AO353_25035 0.76 -0.4 5,521,656 - AO353_25035 0.76 -0.4 5,521,656 - AO353_25035 0.76 -1.4 5,521,656 - AO353_25035 0.76 -3.0 5,521,698 + AO353_25035 0.80 -0.4 5,521,698 + AO353_25035 0.80 -3.3 5,521,699 - AO353_25035 0.80 +0.0 5,521,699 - AO353_25035 0.80 -3.0 5,521,699 - AO353_25035 0.80 -0.7 5,521,699 - AO353_25035 0.80 -2.0 5,521,818 + -1.4 5,521,818 + -1.2 5,521,818 + -1.4 5,521,819 - -0.4 5,521,864 + -2.8 5,521,864 + +1.1 5,521,864 + -2.0 5,521,886 + -1.0 5,522,355 - -0.9 5,522,364 - -0.4 5,522,382 + -0.9 5,522,383 - +1.6 5,522,384 + +1.1 5,522,384 + -0.4 5,522,419 - -3.0 5,522,445 + +1.9 5,522,446 - -2.8 5,522,556 - -2.4 5,522,556 - +3.6 5,522,596 + -1.4 5,522,633 + -0.2 5,522,634 - +1.9 5,522,671 + +0.7 5,522,727 - AO353_25045 0.11 -0.4 5,522,757 + AO353_25045 0.13 -1.4 5,522,757 + AO353_25045 0.13 -2.8 5,522,879 + AO353_25045 0.24 -0.1 5,522,879 + AO353_25045 0.24 -1.4 5,522,880 - AO353_25045 0.24 -1.4 5,522,880 - AO353_25045 0.24 -1.2 5,522,880 - AO353_25045 0.24 -1.7 5,522,880 - AO353_25045 0.24 +1.1 5,522,881 + AO353_25045 0.25 +2.0 5,522,881 + AO353_25045 0.25 -2.4 5,522,882 - AO353_25045 0.25 -1.4 5,522,882 - AO353_25045 0.25 +0.9 5,522,882 - AO353_25045 0.25 -2.8 5,522,882 - AO353_25045 0.25 +2.1 5,522,914 + AO353_25045 0.28 -0.4 5,522,914 + AO353_25045 0.28 -2.4 5,522,914 + AO353_25045 0.28 +0.6 5,522,914 + AO353_25045 0.28 +1.6 5,522,914 + AO353_25045 0.28 +0.6 5,522,915 - AO353_25045 0.28 -0.4 5,522,915 - AO353_25045 0.28 -2.4 5,522,915 - AO353_25045 0.28 -1.4 5,522,915 - AO353_25045 0.28 +0.1 5,522,915 - AO353_25045 0.28 -1.4 5,522,915 - AO353_25045 0.28 -2.4 5,522,915 - AO353_25045 0.28 -2.0 5,522,915 - AO353_25045 0.28 -1.7 5,523,148 + AO353_25045 0.49 -0.4 5,523,210 + AO353_25045 0.54 -0.4 5,523,211 - AO353_25045 0.54 -3.0 5,523,211 - AO353_25045 0.54 +1.1 5,523,211 - AO353_25045 0.54 -2.4 5,523,260 + AO353_25045 0.59 -1.0 5,523,260 + AO353_25045 0.59 +1.1 5,523,260 + AO353_25045 0.59 -0.4 5,523,260 + AO353_25045 0.59 +1.7 5,523,260 + AO353_25045 0.59 +0.8 5,523,260 + AO353_25045 0.59 -0.0 5,523,261 - AO353_25045 0.59 -2.8 5,523,261 - AO353_25045 0.59 -2.4 5,523,261 - AO353_25045 0.59 +1.4 5,523,261 - AO353_25045 0.59 +0.9 5,523,261 - AO353_25045 0.59 -2.8 5,523,261 - AO353_25045 0.59 -1.4 5,523,295 + AO353_25045 0.62 -1.4 5,523,296 - AO353_25045 0.62 +1.3 5,523,319 + AO353_25045 0.64 -1.4 5,523,320 - AO353_25045 0.64 -2.4
Or see this region's nucleotide sequence