Experiment: Cisplatin 0.006 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_24185 and AO353_24190 are separated by 190 nucleotides AO353_24190 and AO353_24195 are separated by 120 nucleotides AO353_24195 and AO353_24200 are separated by 125 nucleotides
AO353_24185: AO353_24185 - serine/threonine protein phosphatase, at 5,320,052 to 5,320,783
_24185
AO353_24190: AO353_24190 - hypothetical protein, at 5,320,974 to 5,321,231
_24190
AO353_24195: AO353_24195 - hypothetical protein, at 5,321,352 to 5,321,780
_24195
AO353_24200: AO353_24200 - serine--tRNA ligase, at 5,321,906 to 5,323,186
_24200
Position (kb) 5320
5321
5322 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 5320.008 kb on + strand at 5320.008 kb on + strand at 5320.008 kb on + strand at 5320.009 kb on - strand at 5320.025 kb on + strand at 5320.026 kb on - strand at 5320.031 kb on + strand at 5320.032 kb on - strand at 5320.047 kb on + strand at 5320.047 kb on + strand at 5320.048 kb on - strand at 5320.061 kb on + strand at 5320.061 kb on + strand at 5320.061 kb on + strand at 5320.061 kb on + strand at 5320.061 kb on + strand at 5320.061 kb on + strand at 5320.061 kb on + strand at 5320.118 kb on + strand at 5320.119 kb on - strand at 5320.119 kb on - strand at 5320.119 kb on - strand at 5320.119 kb on - strand at 5320.125 kb on + strand at 5320.125 kb on + strand at 5320.125 kb on + strand at 5320.126 kb on - strand, within AO353_24185 at 5320.126 kb on - strand, within AO353_24185 at 5320.126 kb on - strand, within AO353_24185 at 5320.144 kb on + strand, within AO353_24185 at 5320.145 kb on - strand, within AO353_24185 at 5320.185 kb on + strand, within AO353_24185 at 5320.186 kb on - strand, within AO353_24185 at 5320.186 kb on - strand, within AO353_24185 at 5320.186 kb on - strand, within AO353_24185 at 5320.205 kb on + strand, within AO353_24185 at 5320.205 kb on + strand, within AO353_24185 at 5320.205 kb on + strand, within AO353_24185 at 5320.206 kb on - strand, within AO353_24185 at 5320.229 kb on + strand, within AO353_24185 at 5320.230 kb on - strand, within AO353_24185 at 5320.230 kb on - strand, within AO353_24185 at 5320.296 kb on + strand, within AO353_24185 at 5320.360 kb on + strand, within AO353_24185 at 5320.360 kb on + strand, within AO353_24185 at 5320.360 kb on + strand, within AO353_24185 at 5320.360 kb on + strand, within AO353_24185 at 5320.446 kb on - strand, within AO353_24185 at 5320.669 kb on + strand, within AO353_24185 at 5320.669 kb on + strand, within AO353_24185 at 5320.670 kb on - strand, within AO353_24185 at 5320.781 kb on + strand at 5320.781 kb on + strand at 5320.781 kb on + strand at 5320.781 kb on + strand at 5320.782 kb on - strand at 5320.785 kb on + strand at 5320.785 kb on + strand at 5320.785 kb on + strand at 5320.785 kb on + strand at 5320.785 kb on + strand at 5320.785 kb on + strand at 5320.785 kb on + strand at 5320.785 kb on + strand at 5320.786 kb on - strand at 5320.786 kb on - strand at 5320.786 kb on - strand at 5320.786 kb on - strand at 5320.786 kb on - strand at 5320.786 kb on - strand at 5320.786 kb on - strand at 5320.786 kb on - strand at 5320.840 kb on + strand at 5320.840 kb on + strand at 5320.840 kb on + strand at 5320.866 kb on + strand at 5320.878 kb on + strand at 5320.878 kb on + strand at 5320.878 kb on + strand at 5320.878 kb on + strand at 5320.878 kb on + strand at 5320.878 kb on + strand at 5320.879 kb on - strand at 5320.883 kb on - strand at 5320.883 kb on - strand at 5320.932 kb on + strand at 5320.932 kb on + strand at 5320.933 kb on - strand at 5321.055 kb on + strand, within AO353_24190 at 5321.055 kb on + strand, within AO353_24190 at 5321.093 kb on + strand, within AO353_24190 at 5321.094 kb on - strand, within AO353_24190 at 5321.143 kb on + strand, within AO353_24190 at 5321.180 kb on + strand, within AO353_24190 at 5321.181 kb on - strand, within AO353_24190 at 5321.204 kb on + strand, within AO353_24190 at 5321.204 kb on + strand, within AO353_24190 at 5321.205 kb on - strand, within AO353_24190 at 5321.205 kb on - strand, within AO353_24190 at 5321.208 kb on + strand at 5321.208 kb on + strand at 5321.209 kb on - strand at 5321.209 kb on - strand at 5321.209 kb on - strand at 5321.223 kb on + strand at 5321.258 kb on - strand at 5321.307 kb on + strand at 5321.307 kb on + strand at 5321.307 kb on + strand at 5321.307 kb on + strand at 5321.307 kb on + strand at 5321.307 kb on + strand at 5321.307 kb on + strand at 5321.308 kb on - strand at 5321.308 kb on - strand at 5321.386 kb on + strand at 5321.386 kb on + strand at 5321.386 kb on + strand at 5321.386 kb on + strand at 5321.386 kb on + strand at 5321.386 kb on + strand at 5321.387 kb on - strand at 5321.387 kb on - strand at 5321.387 kb on - strand at 5321.392 kb on - strand at 5321.459 kb on + strand, within AO353_24195 at 5321.460 kb on - strand, within AO353_24195 at 5321.528 kb on + strand, within AO353_24195 at 5321.528 kb on + strand, within AO353_24195 at 5321.529 kb on - strand, within AO353_24195 at 5321.574 kb on + strand, within AO353_24195 at 5321.574 kb on + strand, within AO353_24195 at 5321.574 kb on + strand, within AO353_24195 at 5321.574 kb on + strand, within AO353_24195 at 5321.575 kb on - strand, within AO353_24195 at 5321.575 kb on - strand, within AO353_24195 at 5321.663 kb on + strand, within AO353_24195 at 5321.688 kb on + strand, within AO353_24195 at 5321.688 kb on + strand, within AO353_24195 at 5321.688 kb on + strand, within AO353_24195 at 5321.688 kb on + strand, within AO353_24195 at 5321.688 kb on + strand, within AO353_24195 at 5321.689 kb on - strand, within AO353_24195 at 5321.689 kb on - strand, within AO353_24195 at 5321.718 kb on + strand, within AO353_24195 at 5321.718 kb on + strand, within AO353_24195 at 5321.718 kb on + strand, within AO353_24195 at 5321.718 kb on + strand, within AO353_24195 at 5321.719 kb on - strand, within AO353_24195 at 5321.719 kb on - strand, within AO353_24195 at 5321.719 kb on - strand, within AO353_24195 at 5321.719 kb on - strand, within AO353_24195 at 5321.719 kb on - strand, within AO353_24195 at 5321.719 kb on - strand, within AO353_24195 at 5321.719 kb on - strand at 5321.778 kb on + strand at 5321.778 kb on + strand at 5321.779 kb on - strand at 5321.779 kb on - strand at 5321.832 kb on + strand at 5321.832 kb on + strand at 5321.833 kb on - strand at 5321.881 kb on + strand at 5321.881 kb on + strand at 5321.882 kb on - strand at 5321.887 kb on - strand at 5321.887 kb on - strand at 5321.887 kb on - strand at 5321.977 kb on - strand at 5321.977 kb on - strand at 5322.058 kb on + strand, within AO353_24200
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.006 mg/ml remove 5,320,008 + +0.8 5,320,008 + -0.4 5,320,008 + +1.1 5,320,009 - +2.9 5,320,025 + +1.9 5,320,026 - -1.4 5,320,031 + -1.4 5,320,032 - +1.0 5,320,047 + -1.4 5,320,047 + -1.4 5,320,048 - +0.7 5,320,061 + +1.1 5,320,061 + -1.4 5,320,061 + +0.6 5,320,061 + -0.4 5,320,061 + +0.9 5,320,061 + -1.0 5,320,061 + -0.9 5,320,118 + +2.0 5,320,119 - +0.9 5,320,119 - -1.0 5,320,119 - -0.4 5,320,119 - -0.4 5,320,125 + +0.1 5,320,125 + -0.4 5,320,125 + -1.0 5,320,126 - AO353_24185 0.10 +0.3 5,320,126 - AO353_24185 0.10 -0.4 5,320,126 - AO353_24185 0.10 -2.4 5,320,144 + AO353_24185 0.13 -0.1 5,320,145 - AO353_24185 0.13 -0.4 5,320,185 + AO353_24185 0.18 -0.2 5,320,186 - AO353_24185 0.18 -1.4 5,320,186 - AO353_24185 0.18 +0.1 5,320,186 - AO353_24185 0.18 -2.0 5,320,205 + AO353_24185 0.21 -2.4 5,320,205 + AO353_24185 0.21 -2.4 5,320,205 + AO353_24185 0.21 -1.0 5,320,206 - AO353_24185 0.21 +2.1 5,320,229 + AO353_24185 0.24 +0.6 5,320,230 - AO353_24185 0.24 +0.8 5,320,230 - AO353_24185 0.24 -2.4 5,320,296 + AO353_24185 0.33 +0.9 5,320,360 + AO353_24185 0.42 +2.1 5,320,360 + AO353_24185 0.42 -1.4 5,320,360 + AO353_24185 0.42 -0.4 5,320,360 + AO353_24185 0.42 -2.4 5,320,446 - AO353_24185 0.54 +2.1 5,320,669 + AO353_24185 0.84 -1.4 5,320,669 + AO353_24185 0.84 +1.4 5,320,670 - AO353_24185 0.84 -1.2 5,320,781 + -1.0 5,320,781 + -1.7 5,320,781 + -0.3 5,320,781 + -2.8 5,320,782 - +1.1 5,320,785 + -0.4 5,320,785 + -2.0 5,320,785 + +0.6 5,320,785 + -2.0 5,320,785 + -0.4 5,320,785 + -1.4 5,320,785 + -1.4 5,320,785 + -0.2 5,320,786 - +0.3 5,320,786 - -2.0 5,320,786 - +0.6 5,320,786 - +2.1 5,320,786 - +1.4 5,320,786 - -2.8 5,320,786 - -2.0 5,320,786 - -2.0 5,320,840 + -2.0 5,320,840 + -1.4 5,320,840 + -0.4 5,320,866 + -0.2 5,320,878 + +1.1 5,320,878 + -2.8 5,320,878 + +2.1 5,320,878 + +1.7 5,320,878 + -2.0 5,320,878 + -3.2 5,320,879 - -0.4 5,320,883 - -0.4 5,320,883 - -0.4 5,320,932 + +1.6 5,320,932 + -0.4 5,320,933 - -0.1 5,321,055 + AO353_24190 0.31 -1.4 5,321,055 + AO353_24190 0.31 -0.7 5,321,093 + AO353_24190 0.46 -2.8 5,321,094 - AO353_24190 0.47 -1.4 5,321,143 + AO353_24190 0.66 -2.0 5,321,180 + AO353_24190 0.80 -1.4 5,321,181 - AO353_24190 0.80 -0.8 5,321,204 + AO353_24190 0.89 -1.4 5,321,204 + AO353_24190 0.89 -1.4 5,321,205 - AO353_24190 0.90 -3.0 5,321,205 - AO353_24190 0.90 -1.0 5,321,208 + -3.0 5,321,208 + -0.4 5,321,209 - -0.9 5,321,209 - +0.9 5,321,209 - -2.4 5,321,223 + -0.4 5,321,258 - +0.7 5,321,307 + -1.4 5,321,307 + -0.2 5,321,307 + -1.7 5,321,307 + +0.8 5,321,307 + +1.8 5,321,307 + -1.4 5,321,307 + -0.0 5,321,308 - -2.4 5,321,308 - +0.4 5,321,386 + +2.3 5,321,386 + -1.2 5,321,386 + -2.4 5,321,386 + -0.4 5,321,386 + -2.0 5,321,386 + -2.0 5,321,387 - +0.2 5,321,387 - -0.4 5,321,387 - +1.4 5,321,392 - -3.0 5,321,459 + AO353_24195 0.25 +0.6 5,321,460 - AO353_24195 0.25 +1.6 5,321,528 + AO353_24195 0.41 -1.0 5,321,528 + AO353_24195 0.41 +0.7 5,321,529 - AO353_24195 0.41 +0.3 5,321,574 + AO353_24195 0.52 -0.4 5,321,574 + AO353_24195 0.52 -0.4 5,321,574 + AO353_24195 0.52 -0.4 5,321,574 + AO353_24195 0.52 -0.2 5,321,575 - AO353_24195 0.52 -0.4 5,321,575 - AO353_24195 0.52 -0.4 5,321,663 + AO353_24195 0.72 -2.0 5,321,688 + AO353_24195 0.78 -1.0 5,321,688 + AO353_24195 0.78 -2.0 5,321,688 + AO353_24195 0.78 -2.8 5,321,688 + AO353_24195 0.78 +0.9 5,321,688 + AO353_24195 0.78 +0.3 5,321,689 - AO353_24195 0.79 -1.4 5,321,689 - AO353_24195 0.79 +0.1 5,321,718 + AO353_24195 0.85 -2.0 5,321,718 + AO353_24195 0.85 -2.8 5,321,718 + AO353_24195 0.85 -1.4 5,321,718 + AO353_24195 0.85 -1.4 5,321,719 - AO353_24195 0.86 +2.5 5,321,719 - AO353_24195 0.86 -2.0 5,321,719 - AO353_24195 0.86 -3.0 5,321,719 - AO353_24195 0.86 -1.4 5,321,719 - AO353_24195 0.86 +1.6 5,321,719 - AO353_24195 0.86 -2.0 5,321,719 - -0.4 5,321,778 + -1.4 5,321,778 + -0.0 5,321,779 - -0.4 5,321,779 - -1.4 5,321,832 + -0.9 5,321,832 + -0.4 5,321,833 - +0.3 5,321,881 + -0.4 5,321,881 + +2.1 5,321,882 - +1.1 5,321,887 - -1.4 5,321,887 - -1.4 5,321,887 - -1.0 5,321,977 - -1.4 5,321,977 - -0.9 5,322,058 + AO353_24200 0.12 +0.6
Or see this region's nucleotide sequence