Experiment: Cisplatin 0.006 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_23150 and AO353_23155 are separated by 1 nucleotides AO353_23155 and AO353_23160 overlap by 10 nucleotides AO353_23160 and AO353_23165 are separated by 4 nucleotides AO353_23165 and AO353_23170 are separated by 13 nucleotides
AO353_23150: AO353_23150 - short-chain dehydrogenase, at 5,080,591 to 5,081,388
_23150
AO353_23155: AO353_23155 - IclR family transcriptional regulator, at 5,081,390 to 5,082,232
_23155
AO353_23160: AO353_23160 - hydrolase, at 5,082,223 to 5,083,107
_23160
AO353_23165: AO353_23165 - cupin, at 5,083,112 to 5,083,675
_23165
AO353_23170: AO353_23170 - short-chain dehydrogenase, at 5,083,689 to 5,084,453
_23170
Position (kb)
5082
5083
5084 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 5081.379 kb on - strand at 5081.448 kb on + strand at 5081.448 kb on + strand at 5081.449 kb on - strand at 5081.564 kb on - strand, within AO353_23155 at 5081.564 kb on - strand, within AO353_23155 at 5081.862 kb on + strand, within AO353_23155 at 5081.862 kb on + strand, within AO353_23155 at 5081.862 kb on + strand, within AO353_23155 at 5081.862 kb on + strand, within AO353_23155 at 5081.863 kb on - strand, within AO353_23155 at 5081.863 kb on - strand, within AO353_23155 at 5081.863 kb on - strand at 5081.863 kb on - strand, within AO353_23155 at 5081.863 kb on - strand, within AO353_23155 at 5081.973 kb on + strand, within AO353_23155 at 5082.186 kb on + strand at 5082.186 kb on + strand at 5082.186 kb on + strand at 5082.186 kb on + strand at 5082.186 kb on + strand at 5082.186 kb on + strand at 5082.186 kb on + strand at 5082.186 kb on + strand at 5082.186 kb on + strand at 5082.186 kb on + strand at 5082.186 kb on + strand at 5082.186 kb on + strand at 5082.187 kb on - strand at 5082.187 kb on - strand at 5082.187 kb on - strand at 5082.187 kb on - strand at 5082.187 kb on - strand at 5082.187 kb on - strand at 5082.187 kb on - strand at 5082.187 kb on - strand at 5082.227 kb on - strand at 5082.466 kb on + strand, within AO353_23160 at 5082.466 kb on + strand, within AO353_23160 at 5082.466 kb on + strand, within AO353_23160 at 5082.466 kb on + strand, within AO353_23160 at 5082.466 kb on + strand, within AO353_23160 at 5082.466 kb on + strand, within AO353_23160 at 5082.466 kb on + strand, within AO353_23160 at 5082.467 kb on - strand, within AO353_23160 at 5082.467 kb on - strand, within AO353_23160 at 5082.558 kb on - strand, within AO353_23160 at 5082.558 kb on - strand, within AO353_23160 at 5082.866 kb on + strand, within AO353_23160 at 5082.925 kb on + strand, within AO353_23160 at 5083.113 kb on + strand at 5083.474 kb on - strand, within AO353_23165 at 5083.474 kb on - strand, within AO353_23165 at 5083.474 kb on - strand, within AO353_23165 at 5083.474 kb on - strand, within AO353_23165 at 5083.474 kb on - strand, within AO353_23165 at 5083.474 kb on - strand, within AO353_23165 at 5083.507 kb on - strand, within AO353_23165 at 5083.539 kb on + strand, within AO353_23165 at 5083.539 kb on + strand, within AO353_23165 at 5083.664 kb on + strand at 5083.664 kb on + strand at 5083.664 kb on + strand at 5083.665 kb on - strand at 5083.665 kb on - strand at 5083.665 kb on - strand at 5083.669 kb on + strand at 5083.669 kb on + strand at 5083.669 kb on + strand at 5083.670 kb on - strand at 5083.670 kb on - strand at 5083.670 kb on - strand at 5083.670 kb on - strand at 5083.670 kb on - strand at 5083.670 kb on - strand at 5083.670 kb on - strand at 5083.699 kb on - strand at 5083.825 kb on + strand, within AO353_23170 at 5083.825 kb on + strand, within AO353_23170 at 5083.852 kb on + strand, within AO353_23170 at 5083.852 kb on + strand, within AO353_23170 at 5083.852 kb on + strand, within AO353_23170 at 5083.852 kb on + strand, within AO353_23170 at 5083.852 kb on + strand, within AO353_23170 at 5083.853 kb on - strand, within AO353_23170 at 5083.973 kb on - strand, within AO353_23170
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.006 mg/ml remove 5,081,379 - +1.3 5,081,448 + -0.4 5,081,448 + -2.4 5,081,449 - -2.4 5,081,564 - AO353_23155 0.21 -0.4 5,081,564 - AO353_23155 0.21 +0.8 5,081,862 + AO353_23155 0.56 +1.6 5,081,862 + AO353_23155 0.56 +1.5 5,081,862 + AO353_23155 0.56 +1.9 5,081,862 + AO353_23155 0.56 -2.7 5,081,863 - AO353_23155 0.56 -1.4 5,081,863 - AO353_23155 0.56 -1.4 5,081,863 - -0.4 5,081,863 - AO353_23155 0.56 -0.4 5,081,863 - AO353_23155 0.56 +2.4 5,081,973 + AO353_23155 0.69 -2.7 5,082,186 + -1.4 5,082,186 + -2.7 5,082,186 + +0.2 5,082,186 + -0.4 5,082,186 + -1.4 5,082,186 + +0.6 5,082,186 + -0.4 5,082,186 + -2.7 5,082,186 + -2.0 5,082,186 + -0.4 5,082,186 + +1.2 5,082,186 + +2.4 5,082,187 - -1.4 5,082,187 - -1.0 5,082,187 - +1.8 5,082,187 - -0.6 5,082,187 - +1.3 5,082,187 - +0.7 5,082,187 - -0.4 5,082,187 - -3.2 5,082,227 - -2.0 5,082,466 + AO353_23160 0.27 -0.4 5,082,466 + AO353_23160 0.27 -1.0 5,082,466 + AO353_23160 0.27 -2.0 5,082,466 + AO353_23160 0.27 -0.4 5,082,466 + AO353_23160 0.27 +1.4 5,082,466 + AO353_23160 0.27 +0.6 5,082,466 + AO353_23160 0.27 -1.0 5,082,467 - AO353_23160 0.28 -3.4 5,082,467 - AO353_23160 0.28 +0.0 5,082,558 - AO353_23160 0.38 +0.2 5,082,558 - AO353_23160 0.38 +2.0 5,082,866 + AO353_23160 0.73 +2.1 5,082,925 + AO353_23160 0.79 -0.1 5,083,113 + -2.7 5,083,474 - AO353_23165 0.64 +0.0 5,083,474 - AO353_23165 0.64 -2.4 5,083,474 - AO353_23165 0.64 -0.5 5,083,474 - AO353_23165 0.64 -1.4 5,083,474 - AO353_23165 0.64 +1.4 5,083,474 - AO353_23165 0.64 -3.2 5,083,507 - AO353_23165 0.70 +1.4 5,083,539 + AO353_23165 0.76 -3.0 5,083,539 + AO353_23165 0.76 -2.0 5,083,664 + -2.0 5,083,664 + -2.0 5,083,664 + -1.4 5,083,665 - +1.2 5,083,665 - -2.4 5,083,665 - +1.9 5,083,669 + -0.8 5,083,669 + -0.4 5,083,669 + -2.0 5,083,670 - +0.6 5,083,670 - -1.4 5,083,670 - -2.7 5,083,670 - +1.2 5,083,670 - -2.0 5,083,670 - +2.2 5,083,670 - +0.6 5,083,699 - +2.2 5,083,825 + AO353_23170 0.18 -0.4 5,083,825 + AO353_23170 0.18 -3.4 5,083,852 + AO353_23170 0.21 -1.3 5,083,852 + AO353_23170 0.21 -2.0 5,083,852 + AO353_23170 0.21 +0.8 5,083,852 + AO353_23170 0.21 +1.0 5,083,852 + AO353_23170 0.21 -2.4 5,083,853 - AO353_23170 0.21 +0.9 5,083,973 - AO353_23170 0.37 -2.7
Or see this region's nucleotide sequence