Experiment: Cisplatin 0.006 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_22985 and AO353_22990 are separated by 350 nucleotides AO353_22990 and AO353_22995 are separated by 130 nucleotides AO353_22995 and AO353_23000 are separated by 344 nucleotides
AO353_22985: AO353_22985 - hypothetical protein, at 5,047,438 to 5,047,632
_22985
AO353_22990: AO353_22990 - phospholipid-binding protein, at 5,047,983 to 5,048,336
_22990
AO353_22995: AO353_22995 - UDP pyrophosphate phosphatase, at 5,048,467 to 5,049,339
_22995
AO353_23000: AO353_23000 - hypothetical protein, at 5,049,684 to 5,050,451
_23000
Position (kb) 5048
5049
5050 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 5047.485 kb on - strand, within AO353_22985 at 5047.596 kb on + strand, within AO353_22985 at 5047.596 kb on + strand, within AO353_22985 at 5047.597 kb on - strand, within AO353_22985 at 5047.597 kb on - strand, within AO353_22985 at 5047.597 kb on - strand, within AO353_22985 at 5047.597 kb on - strand, within AO353_22985 at 5047.626 kb on + strand at 5047.626 kb on + strand at 5047.626 kb on + strand at 5047.627 kb on - strand at 5047.627 kb on - strand at 5047.685 kb on + strand at 5047.685 kb on + strand at 5047.703 kb on + strand at 5047.703 kb on + strand at 5047.703 kb on + strand at 5047.703 kb on + strand at 5047.704 kb on - strand at 5047.704 kb on - strand at 5047.704 kb on - strand at 5047.704 kb on - strand at 5047.704 kb on - strand at 5047.709 kb on + strand at 5047.709 kb on + strand at 5047.710 kb on - strand at 5047.710 kb on - strand at 5047.841 kb on + strand at 5047.841 kb on + strand at 5047.841 kb on + strand at 5047.842 kb on - strand at 5047.842 kb on - strand at 5047.842 kb on - strand at 5047.842 kb on - strand at 5047.842 kb on - strand at 5047.842 kb on - strand at 5047.842 kb on - strand at 5047.842 kb on - strand at 5047.842 kb on - strand at 5047.842 kb on - strand at 5047.898 kb on - strand at 5047.898 kb on - strand at 5047.946 kb on + strand at 5047.946 kb on + strand at 5047.946 kb on + strand at 5047.946 kb on + strand at 5047.946 kb on + strand at 5047.947 kb on - strand at 5047.947 kb on - strand at 5047.947 kb on - strand at 5047.950 kb on + strand at 5047.950 kb on + strand at 5047.951 kb on - strand at 5047.951 kb on - strand at 5047.951 kb on - strand at 5047.951 kb on - strand at 5047.951 kb on - strand at 5047.982 kb on + strand at 5047.983 kb on - strand at 5047.983 kb on - strand at 5047.983 kb on - strand at 5048.007 kb on + strand at 5048.007 kb on + strand at 5048.008 kb on - strand at 5048.015 kb on + strand at 5048.015 kb on + strand at 5048.048 kb on + strand, within AO353_22990 at 5048.048 kb on + strand, within AO353_22990 at 5048.048 kb on + strand, within AO353_22990 at 5048.048 kb on + strand, within AO353_22990 at 5048.048 kb on + strand, within AO353_22990 at 5048.048 kb on + strand, within AO353_22990 at 5048.051 kb on + strand, within AO353_22990 at 5048.127 kb on - strand, within AO353_22990 at 5048.127 kb on - strand, within AO353_22990 at 5048.127 kb on - strand, within AO353_22990 at 5048.179 kb on + strand, within AO353_22990 at 5048.180 kb on - strand, within AO353_22990 at 5048.334 kb on + strand at 5048.334 kb on + strand at 5048.334 kb on + strand at 5048.334 kb on + strand at 5048.334 kb on + strand at 5048.334 kb on + strand at 5048.334 kb on + strand at 5048.334 kb on + strand at 5048.335 kb on - strand at 5048.335 kb on - strand at 5048.335 kb on - strand at 5048.335 kb on - strand at 5048.335 kb on - strand at 5048.335 kb on - strand at 5048.335 kb on - strand at 5048.335 kb on - strand at 5048.335 kb on - strand at 5048.335 kb on - strand at 5048.335 kb on - strand at 5048.335 kb on - strand at 5048.335 kb on - strand at 5048.335 kb on - strand at 5048.420 kb on + strand at 5048.420 kb on + strand at 5048.421 kb on - strand at 5048.421 kb on - strand at 5048.421 kb on - strand at 5048.421 kb on - strand at 5048.448 kb on - strand at 5048.468 kb on + strand at 5048.469 kb on - strand at 5048.469 kb on - strand at 5048.509 kb on - strand at 5048.525 kb on + strand at 5048.526 kb on - strand at 5048.529 kb on + strand at 5048.529 kb on + strand at 5048.530 kb on - strand at 5048.649 kb on + strand, within AO353_22995 at 5048.649 kb on + strand, within AO353_22995 at 5048.649 kb on + strand, within AO353_22995 at 5048.650 kb on - strand, within AO353_22995 at 5048.650 kb on - strand, within AO353_22995 at 5048.660 kb on + strand, within AO353_22995 at 5048.660 kb on + strand, within AO353_22995 at 5048.661 kb on - strand, within AO353_22995 at 5048.661 kb on - strand, within AO353_22995 at 5048.928 kb on + strand, within AO353_22995 at 5048.928 kb on + strand, within AO353_22995 at 5048.929 kb on - strand, within AO353_22995 at 5048.968 kb on - strand, within AO353_22995 at 5049.059 kb on + strand, within AO353_22995 at 5049.059 kb on + strand, within AO353_22995 at 5049.059 kb on + strand, within AO353_22995 at 5049.060 kb on - strand, within AO353_22995 at 5049.060 kb on - strand, within AO353_22995 at 5049.082 kb on + strand, within AO353_22995 at 5049.082 kb on + strand, within AO353_22995 at 5049.082 kb on + strand, within AO353_22995 at 5049.082 kb on + strand, within AO353_22995 at 5049.083 kb on - strand, within AO353_22995 at 5049.106 kb on + strand, within AO353_22995 at 5049.106 kb on + strand, within AO353_22995 at 5049.122 kb on + strand, within AO353_22995 at 5049.122 kb on + strand, within AO353_22995 at 5049.123 kb on - strand, within AO353_22995 at 5049.123 kb on - strand, within AO353_22995 at 5049.241 kb on + strand, within AO353_22995 at 5049.241 kb on + strand, within AO353_22995 at 5049.241 kb on + strand, within AO353_22995 at 5049.241 kb on + strand, within AO353_22995 at 5049.241 kb on + strand, within AO353_22995 at 5049.242 kb on - strand, within AO353_22995 at 5049.242 kb on - strand, within AO353_22995 at 5049.242 kb on - strand, within AO353_22995 at 5049.325 kb on - strand at 5049.343 kb on - strand at 5049.343 kb on - strand at 5049.343 kb on - strand at 5049.351 kb on + strand at 5049.358 kb on + strand at 5049.358 kb on + strand at 5049.478 kb on + strand at 5049.478 kb on + strand at 5049.478 kb on + strand at 5049.557 kb on + strand at 5049.557 kb on + strand at 5049.577 kb on + strand at 5049.577 kb on + strand at 5049.577 kb on + strand at 5049.577 kb on + strand at 5049.577 kb on + strand at 5049.577 kb on + strand at 5049.577 kb on + strand at 5049.577 kb on + strand at 5049.577 kb on + strand at 5049.578 kb on - strand at 5049.578 kb on - strand at 5049.578 kb on - strand at 5049.578 kb on - strand at 5049.621 kb on + strand at 5049.621 kb on + strand at 5049.621 kb on + strand at 5049.621 kb on + strand at 5049.621 kb on + strand at 5049.621 kb on + strand at 5049.621 kb on + strand at 5049.621 kb on + strand at 5049.621 kb on + strand at 5049.622 kb on - strand at 5049.622 kb on - strand at 5049.622 kb on - strand at 5049.622 kb on - strand at 5049.622 kb on - strand at 5049.635 kb on + strand at 5049.636 kb on - strand at 5049.696 kb on - strand at 5049.716 kb on + strand at 5049.717 kb on - strand at 5049.717 kb on - strand at 5049.767 kb on + strand, within AO353_23000 at 5049.767 kb on + strand at 5049.767 kb on + strand, within AO353_23000 at 5049.768 kb on - strand, within AO353_23000 at 5049.881 kb on + strand, within AO353_23000 at 5049.882 kb on - strand, within AO353_23000 at 5049.882 kb on - strand at 5049.882 kb on - strand, within AO353_23000 at 5049.891 kb on + strand, within AO353_23000 at 5049.906 kb on + strand, within AO353_23000 at 5049.958 kb on + strand, within AO353_23000 at 5049.958 kb on + strand, within AO353_23000 at 5049.958 kb on + strand, within AO353_23000 at 5049.958 kb on + strand, within AO353_23000 at 5049.959 kb on - strand, within AO353_23000 at 5049.959 kb on - strand, within AO353_23000 at 5049.987 kb on + strand, within AO353_23000 at 5049.988 kb on - strand, within AO353_23000 at 5050.003 kb on + strand, within AO353_23000 at 5050.004 kb on - strand, within AO353_23000 at 5050.101 kb on + strand, within AO353_23000 at 5050.101 kb on + strand, within AO353_23000 at 5050.101 kb on + strand, within AO353_23000 at 5050.101 kb on + strand, within AO353_23000 at 5050.102 kb on - strand, within AO353_23000 at 5050.250 kb on + strand, within AO353_23000 at 5050.250 kb on + strand, within AO353_23000 at 5050.250 kb on + strand, within AO353_23000 at 5050.251 kb on - strand, within AO353_23000 at 5050.251 kb on - strand, within AO353_23000 at 5050.251 kb on - strand, within AO353_23000 at 5050.251 kb on - strand, within AO353_23000 at 5050.251 kb on - strand, within AO353_23000 at 5050.251 kb on - strand, within AO353_23000 at 5050.251 kb on - strand, within AO353_23000 at 5050.275 kb on + strand, within AO353_23000 at 5050.276 kb on - strand, within AO353_23000 at 5050.276 kb on - strand, within AO353_23000 at 5050.276 kb on - strand, within AO353_23000 at 5050.276 kb on - strand, within AO353_23000 at 5050.276 kb on - strand at 5050.336 kb on - strand, within AO353_23000 at 5050.336 kb on - strand, within AO353_23000
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.006 mg/ml remove 5,047,485 - AO353_22985 0.24 +0.3 5,047,596 + AO353_22985 0.81 +1.9 5,047,596 + AO353_22985 0.81 -0.4 5,047,597 - AO353_22985 0.82 +1.1 5,047,597 - AO353_22985 0.82 -1.4 5,047,597 - AO353_22985 0.82 +1.1 5,047,597 - AO353_22985 0.82 +1.5 5,047,626 + -1.1 5,047,626 + +1.1 5,047,626 + +1.4 5,047,627 - -2.2 5,047,627 - -1.4 5,047,685 + -2.7 5,047,685 + +0.0 5,047,703 + -0.4 5,047,703 + +1.1 5,047,703 + +2.4 5,047,703 + -1.4 5,047,704 - -1.4 5,047,704 - +0.6 5,047,704 - -0.4 5,047,704 - +0.6 5,047,704 - -1.0 5,047,709 + -0.4 5,047,709 + -2.4 5,047,710 - -2.0 5,047,710 - -0.4 5,047,841 + +0.2 5,047,841 + -0.4 5,047,841 + +0.5 5,047,842 - -2.0 5,047,842 - +0.8 5,047,842 - -3.0 5,047,842 - -1.4 5,047,842 - +3.0 5,047,842 - -1.4 5,047,842 - +0.2 5,047,842 - -0.8 5,047,842 - -0.4 5,047,842 - -2.0 5,047,898 - +0.6 5,047,898 - -2.7 5,047,946 + -0.4 5,047,946 + +0.3 5,047,946 + -2.4 5,047,946 + -3.0 5,047,946 + -0.4 5,047,947 - +0.6 5,047,947 - -2.7 5,047,947 - +1.8 5,047,950 + +1.1 5,047,950 + -0.4 5,047,951 - -2.0 5,047,951 - +1.4 5,047,951 - +0.2 5,047,951 - -0.4 5,047,951 - +0.2 5,047,982 + -2.4 5,047,983 - +1.1 5,047,983 - -2.4 5,047,983 - +1.7 5,048,007 + +2.2 5,048,007 + -2.0 5,048,008 - +0.4 5,048,015 + -2.7 5,048,015 + -0.4 5,048,048 + AO353_22990 0.18 -2.4 5,048,048 + AO353_22990 0.18 +0.2 5,048,048 + AO353_22990 0.18 -1.4 5,048,048 + AO353_22990 0.18 +1.1 5,048,048 + AO353_22990 0.18 -1.4 5,048,048 + AO353_22990 0.18 -0.2 5,048,051 + AO353_22990 0.19 +1.0 5,048,127 - AO353_22990 0.41 -3.0 5,048,127 - AO353_22990 0.41 -0.1 5,048,127 - AO353_22990 0.41 -3.0 5,048,179 + AO353_22990 0.55 +0.9 5,048,180 - AO353_22990 0.56 -0.6 5,048,334 + -2.0 5,048,334 + -1.4 5,048,334 + -1.4 5,048,334 + +2.5 5,048,334 + -1.4 5,048,334 + +0.0 5,048,334 + +2.7 5,048,334 + +1.2 5,048,335 - -2.4 5,048,335 - -0.8 5,048,335 - +1.8 5,048,335 - -0.4 5,048,335 - -0.4 5,048,335 - -1.4 5,048,335 - +0.3 5,048,335 - +0.2 5,048,335 - -2.2 5,048,335 - -2.0 5,048,335 - -2.0 5,048,335 - +1.6 5,048,335 - +0.4 5,048,335 - -2.7 5,048,420 + -0.1 5,048,420 + -1.2 5,048,421 - -2.4 5,048,421 - -0.7 5,048,421 - -1.4 5,048,421 - +1.4 5,048,448 - +0.8 5,048,468 + -1.4 5,048,469 - +1.9 5,048,469 - +0.4 5,048,509 - -1.2 5,048,525 + +0.6 5,048,526 - -0.1 5,048,529 + +0.6 5,048,529 + -0.8 5,048,530 - +0.2 5,048,649 + AO353_22995 0.21 +3.9 5,048,649 + AO353_22995 0.21 -0.4 5,048,649 + AO353_22995 0.21 -2.0 5,048,650 - AO353_22995 0.21 +1.3 5,048,650 - AO353_22995 0.21 -0.4 5,048,660 + AO353_22995 0.22 +0.6 5,048,660 + AO353_22995 0.22 -2.0 5,048,661 - AO353_22995 0.22 +0.8 5,048,661 - AO353_22995 0.22 -0.5 5,048,928 + AO353_22995 0.53 +2.4 5,048,928 + AO353_22995 0.53 +1.9 5,048,929 - AO353_22995 0.53 -1.7 5,048,968 - AO353_22995 0.57 +1.6 5,049,059 + AO353_22995 0.68 +1.2 5,049,059 + AO353_22995 0.68 +2.6 5,049,059 + AO353_22995 0.68 +0.0 5,049,060 - AO353_22995 0.68 +2.4 5,049,060 - AO353_22995 0.68 -1.4 5,049,082 + AO353_22995 0.70 +0.3 5,049,082 + AO353_22995 0.70 +1.9 5,049,082 + AO353_22995 0.70 -1.4 5,049,082 + AO353_22995 0.70 +0.0 5,049,083 - AO353_22995 0.71 -1.4 5,049,106 + AO353_22995 0.73 +1.2 5,049,106 + AO353_22995 0.73 +2.0 5,049,122 + AO353_22995 0.75 -0.4 5,049,122 + AO353_22995 0.75 -0.4 5,049,123 - AO353_22995 0.75 -2.0 5,049,123 - AO353_22995 0.75 -3.2 5,049,241 + AO353_22995 0.89 -1.4 5,049,241 + AO353_22995 0.89 -0.4 5,049,241 + AO353_22995 0.89 +0.6 5,049,241 + AO353_22995 0.89 +0.7 5,049,241 + AO353_22995 0.89 -1.0 5,049,242 - AO353_22995 0.89 -0.4 5,049,242 - AO353_22995 0.89 -3.2 5,049,242 - AO353_22995 0.89 -2.7 5,049,325 - +0.6 5,049,343 - -2.0 5,049,343 - -0.4 5,049,343 - -2.0 5,049,351 + -0.4 5,049,358 + -1.1 5,049,358 + +0.8 5,049,478 + -2.0 5,049,478 + -0.4 5,049,478 + +1.0 5,049,557 + -1.4 5,049,557 + -2.4 5,049,577 + -2.4 5,049,577 + -0.8 5,049,577 + -0.4 5,049,577 + -1.4 5,049,577 + -0.4 5,049,577 + -2.0 5,049,577 + +0.0 5,049,577 + +1.2 5,049,577 + +0.3 5,049,578 - -2.0 5,049,578 - -0.4 5,049,578 - -2.0 5,049,578 - -1.4 5,049,621 + -3.0 5,049,621 + -3.6 5,049,621 + -0.6 5,049,621 + -0.4 5,049,621 + -0.4 5,049,621 + -2.4 5,049,621 + -2.4 5,049,621 + -2.0 5,049,621 + -1.4 5,049,622 - -2.0 5,049,622 - -0.8 5,049,622 - -0.4 5,049,622 - -0.4 5,049,622 - -2.7 5,049,635 + +1.9 5,049,636 - +0.6 5,049,696 - -0.4 5,049,716 + -0.4 5,049,717 - -2.7 5,049,717 - -2.7 5,049,767 + AO353_23000 0.11 +0.0 5,049,767 + +1.9 5,049,767 + AO353_23000 0.11 -2.7 5,049,768 - AO353_23000 0.11 -2.0 5,049,881 + AO353_23000 0.26 +0.9 5,049,882 - AO353_23000 0.26 -3.7 5,049,882 - -0.4 5,049,882 - AO353_23000 0.26 -2.4 5,049,891 + AO353_23000 0.27 -0.4 5,049,906 + AO353_23000 0.29 -2.7 5,049,958 + AO353_23000 0.36 +0.2 5,049,958 + AO353_23000 0.36 +1.0 5,049,958 + AO353_23000 0.36 -0.4 5,049,958 + AO353_23000 0.36 +0.2 5,049,959 - AO353_23000 0.36 +3.2 5,049,959 - AO353_23000 0.36 -1.4 5,049,987 + AO353_23000 0.39 -1.6 5,049,988 - AO353_23000 0.40 +0.0 5,050,003 + AO353_23000 0.42 -2.4 5,050,004 - AO353_23000 0.42 -0.4 5,050,101 + AO353_23000 0.54 +0.2 5,050,101 + AO353_23000 0.54 -2.0 5,050,101 + AO353_23000 0.54 +0.7 5,050,101 + AO353_23000 0.54 -1.4 5,050,102 - AO353_23000 0.54 -0.2 5,050,250 + AO353_23000 0.74 -2.4 5,050,250 + AO353_23000 0.74 -1.4 5,050,250 + AO353_23000 0.74 +2.9 5,050,251 - AO353_23000 0.74 -1.4 5,050,251 - AO353_23000 0.74 -1.4 5,050,251 - AO353_23000 0.74 -0.4 5,050,251 - AO353_23000 0.74 -0.4 5,050,251 - AO353_23000 0.74 -3.0 5,050,251 - AO353_23000 0.74 -0.7 5,050,251 - AO353_23000 0.74 -0.4 5,050,275 + AO353_23000 0.77 -2.4 5,050,276 - AO353_23000 0.77 -2.4 5,050,276 - AO353_23000 0.77 +1.5 5,050,276 - AO353_23000 0.77 +3.4 5,050,276 - AO353_23000 0.77 +1.4 5,050,276 - -0.4 5,050,336 - AO353_23000 0.85 -2.7 5,050,336 - AO353_23000 0.85 -2.7
Or see this region's nucleotide sequence