Experiment: Cisplatin 0.006 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_22065 and AO353_22070 are separated by 75 nucleotides AO353_22070 and AO353_22075 are separated by 86 nucleotides AO353_22075 and AO353_22080 overlap by 4 nucleotides
AO353_22065: AO353_22065 - zinc-binding protein, at 4,831,841 to 4,832,245
_22065
AO353_22070: AO353_22070 - DnrE protein, at 4,832,321 to 4,832,998
_22070
AO353_22075: AO353_22075 - hypothetical protein, at 4,833,085 to 4,833,732
_22075
AO353_22080: AO353_22080 - histidine kinase, at 4,833,729 to 4,835,531
_22080
Position (kb)
4833
4834 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 4832.217 kb on + strand at 4832.218 kb on - strand at 4832.294 kb on + strand at 4832.471 kb on + strand, within AO353_22070 at 4832.471 kb on + strand, within AO353_22070 at 4832.472 kb on - strand, within AO353_22070 at 4832.564 kb on + strand, within AO353_22070 at 4832.564 kb on + strand, within AO353_22070 at 4832.564 kb on + strand, within AO353_22070 at 4832.564 kb on + strand, within AO353_22070 at 4832.564 kb on + strand, within AO353_22070 at 4832.564 kb on + strand, within AO353_22070 at 4832.564 kb on + strand, within AO353_22070 at 4832.564 kb on + strand, within AO353_22070 at 4832.564 kb on + strand, within AO353_22070 at 4832.564 kb on + strand, within AO353_22070 at 4832.565 kb on - strand, within AO353_22070 at 4832.565 kb on - strand, within AO353_22070 at 4832.565 kb on - strand, within AO353_22070 at 4832.565 kb on - strand, within AO353_22070 at 4832.565 kb on - strand, within AO353_22070 at 4832.565 kb on - strand, within AO353_22070 at 4832.713 kb on - strand, within AO353_22070 at 4832.808 kb on + strand, within AO353_22070 at 4832.973 kb on - strand at 4832.981 kb on - strand at 4833.003 kb on + strand at 4833.021 kb on + strand at 4833.021 kb on + strand at 4833.021 kb on + strand at 4833.021 kb on + strand at 4833.021 kb on + strand at 4833.021 kb on + strand at 4833.021 kb on + strand at 4833.022 kb on - strand at 4833.022 kb on - strand at 4833.022 kb on - strand at 4833.022 kb on - strand at 4833.024 kb on + strand at 4833.024 kb on + strand at 4833.024 kb on + strand at 4833.024 kb on + strand at 4833.024 kb on + strand at 4833.025 kb on - strand at 4833.025 kb on - strand at 4833.025 kb on - strand at 4833.025 kb on - strand at 4833.047 kb on + strand at 4833.047 kb on + strand at 4833.047 kb on + strand at 4833.047 kb on + strand at 4833.047 kb on + strand at 4833.047 kb on + strand at 4833.047 kb on + strand at 4833.048 kb on - strand at 4833.048 kb on - strand at 4833.048 kb on - strand at 4833.048 kb on - strand at 4833.048 kb on - strand at 4833.048 kb on - strand at 4833.048 kb on - strand at 4833.048 kb on - strand at 4833.048 kb on - strand at 4833.048 kb on - strand at 4833.048 kb on - strand at 4833.048 kb on - strand at 4833.064 kb on - strand at 4833.064 kb on - strand at 4833.153 kb on + strand, within AO353_22075 at 4833.153 kb on + strand, within AO353_22075 at 4833.377 kb on + strand, within AO353_22075 at 4833.378 kb on - strand, within AO353_22075 at 4833.378 kb on - strand, within AO353_22075 at 4833.378 kb on - strand, within AO353_22075 at 4833.416 kb on + strand, within AO353_22075 at 4833.417 kb on - strand, within AO353_22075 at 4833.497 kb on + strand, within AO353_22075 at 4833.497 kb on + strand, within AO353_22075 at 4833.498 kb on - strand, within AO353_22075 at 4833.498 kb on - strand, within AO353_22075 at 4833.498 kb on - strand, within AO353_22075 at 4833.511 kb on + strand, within AO353_22075 at 4833.697 kb on + strand at 4833.697 kb on + strand at 4833.740 kb on + strand at 4833.740 kb on + strand at 4833.741 kb on - strand at 4833.816 kb on + strand at 4833.816 kb on + strand at 4833.816 kb on + strand at 4833.817 kb on - strand at 4833.960 kb on + strand, within AO353_22080 at 4833.960 kb on + strand, within AO353_22080 at 4834.306 kb on + strand, within AO353_22080 at 4834.626 kb on + strand, within AO353_22080 at 4834.626 kb on + strand, within AO353_22080 at 4834.626 kb on + strand, within AO353_22080 at 4834.659 kb on + strand, within AO353_22080 at 4834.659 kb on + strand, within AO353_22080 at 4834.659 kb on + strand, within AO353_22080 at 4834.659 kb on + strand, within AO353_22080 at 4834.660 kb on - strand, within AO353_22080
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.006 mg/ml remove 4,832,217 + +1.7 4,832,218 - +1.1 4,832,294 + +0.3 4,832,471 + AO353_22070 0.22 +1.3 4,832,471 + AO353_22070 0.22 -0.5 4,832,472 - AO353_22070 0.22 +3.0 4,832,564 + AO353_22070 0.36 +2.5 4,832,564 + AO353_22070 0.36 +2.3 4,832,564 + AO353_22070 0.36 -0.3 4,832,564 + AO353_22070 0.36 +1.2 4,832,564 + AO353_22070 0.36 +0.3 4,832,564 + AO353_22070 0.36 -0.9 4,832,564 + AO353_22070 0.36 +1.9 4,832,564 + AO353_22070 0.36 -1.9 4,832,564 + AO353_22070 0.36 -0.3 4,832,564 + AO353_22070 0.36 -1.9 4,832,565 - AO353_22070 0.36 -0.5 4,832,565 - AO353_22070 0.36 +1.3 4,832,565 - AO353_22070 0.36 -1.3 4,832,565 - AO353_22070 0.36 +0.3 4,832,565 - AO353_22070 0.36 +1.3 4,832,565 - AO353_22070 0.36 +1.2 4,832,713 - AO353_22070 0.58 +0.7 4,832,808 + AO353_22070 0.72 +0.2 4,832,973 - +0.7 4,832,981 - -1.3 4,833,003 + -1.4 4,833,021 + -0.3 4,833,021 + +2.0 4,833,021 + -1.9 4,833,021 + +0.3 4,833,021 + +0.9 4,833,021 + +0.7 4,833,021 + -2.3 4,833,022 - +1.8 4,833,022 - -0.9 4,833,022 - -0.3 4,833,022 - -0.8 4,833,024 + +2.7 4,833,024 + +0.7 4,833,024 + -1.9 4,833,024 + -0.9 4,833,024 + +0.3 4,833,025 - +0.7 4,833,025 - -2.6 4,833,025 - -0.3 4,833,025 - -1.9 4,833,047 + +2.3 4,833,047 + -1.3 4,833,047 + -0.3 4,833,047 + +2.3 4,833,047 + -2.6 4,833,047 + +0.7 4,833,047 + -2.3 4,833,048 - +0.0 4,833,048 - -1.9 4,833,048 - -0.9 4,833,048 - -0.8 4,833,048 - -0.3 4,833,048 - +1.0 4,833,048 - +2.4 4,833,048 - -1.9 4,833,048 - -0.3 4,833,048 - -0.3 4,833,048 - -1.3 4,833,048 - -3.1 4,833,064 - -0.3 4,833,064 - +0.7 4,833,153 + AO353_22075 0.10 -1.9 4,833,153 + AO353_22075 0.10 -0.3 4,833,377 + AO353_22075 0.45 -3.3 4,833,378 - AO353_22075 0.45 +1.5 4,833,378 - AO353_22075 0.45 +1.1 4,833,378 - AO353_22075 0.45 -3.1 4,833,416 + AO353_22075 0.51 +2.2 4,833,417 - AO353_22075 0.51 -0.3 4,833,497 + AO353_22075 0.64 +1.3 4,833,497 + AO353_22075 0.64 -2.3 4,833,498 - AO353_22075 0.64 -2.6 4,833,498 - AO353_22075 0.64 +1.3 4,833,498 - AO353_22075 0.64 +0.5 4,833,511 + AO353_22075 0.66 -0.3 4,833,697 + +1.1 4,833,697 + +0.2 4,833,740 + +0.7 4,833,740 + -2.1 4,833,741 - +1.5 4,833,816 + -1.9 4,833,816 + -0.9 4,833,816 + -3.1 4,833,817 - +1.0 4,833,960 + AO353_22080 0.13 -0.7 4,833,960 + AO353_22080 0.13 -1.1 4,834,306 + AO353_22080 0.32 -2.6 4,834,626 + AO353_22080 0.50 -0.1 4,834,626 + AO353_22080 0.50 -2.6 4,834,626 + AO353_22080 0.50 +0.7 4,834,659 + AO353_22080 0.52 +0.7 4,834,659 + AO353_22080 0.52 -2.3 4,834,659 + AO353_22080 0.52 -1.5 4,834,659 + AO353_22080 0.52 -0.1 4,834,660 - AO353_22080 0.52 +0.1
Or see this region's nucleotide sequence