Experiment: Cisplatin 0.006 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_22050 and AO353_22055 are separated by 10 nucleotides AO353_22055 and AO353_22060 overlap by 7 nucleotides AO353_22060 and AO353_22065 are separated by 737 nucleotides
AO353_22050: AO353_22050 - protease, at 4,828,746 to 4,829,741
_22050
AO353_22055: AO353_22055 - protease, at 4,829,752 to 4,830,642
_22055
AO353_22060: AO353_22060 - lipid carrier protein, at 4,830,636 to 4,831,103
_22060
AO353_22065: AO353_22065 - zinc-binding protein, at 4,831,841 to 4,832,245
_22065
Position (kb)
4830
4831
4832 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 4829.678 kb on - strand at 4829.678 kb on - strand at 4829.721 kb on + strand at 4829.722 kb on - strand at 4829.722 kb on - strand at 4829.782 kb on + strand at 4829.812 kb on + strand at 4829.812 kb on + strand at 4829.813 kb on - strand at 4829.848 kb on + strand, within AO353_22055 at 4829.848 kb on + strand, within AO353_22055 at 4829.848 kb on + strand, within AO353_22055 at 4829.849 kb on - strand, within AO353_22055 at 4829.849 kb on - strand, within AO353_22055 at 4829.921 kb on + strand, within AO353_22055 at 4829.921 kb on + strand, within AO353_22055 at 4830.109 kb on + strand, within AO353_22055 at 4830.109 kb on + strand at 4830.109 kb on + strand, within AO353_22055 at 4830.171 kb on - strand, within AO353_22055 at 4830.171 kb on - strand, within AO353_22055 at 4830.277 kb on + strand, within AO353_22055 at 4830.278 kb on - strand, within AO353_22055 at 4830.295 kb on - strand, within AO353_22055 at 4830.343 kb on - strand, within AO353_22055 at 4830.350 kb on - strand, within AO353_22055 at 4830.440 kb on + strand, within AO353_22055 at 4830.440 kb on + strand, within AO353_22055 at 4830.452 kb on - strand, within AO353_22055 at 4830.510 kb on + strand, within AO353_22055 at 4830.533 kb on - strand, within AO353_22055 at 4831.116 kb on - strand at 4831.131 kb on - strand at 4831.131 kb on - strand at 4831.131 kb on - strand at 4831.131 kb on - strand at 4831.131 kb on - strand at 4831.131 kb on - strand at 4831.131 kb on - strand at 4831.131 kb on - strand at 4831.135 kb on - strand at 4831.135 kb on - strand at 4831.161 kb on - strand at 4831.184 kb on + strand at 4831.229 kb on - strand at 4831.229 kb on - strand at 4831.242 kb on + strand at 4831.420 kb on + strand at 4831.421 kb on - strand at 4831.421 kb on - strand at 4831.421 kb on - strand at 4831.478 kb on - strand at 4831.478 kb on - strand at 4831.478 kb on - strand at 4831.705 kb on - strand at 4831.750 kb on - strand at 4831.775 kb on + strand at 4831.775 kb on + strand at 4831.775 kb on + strand at 4831.775 kb on + strand at 4831.775 kb on + strand at 4831.776 kb on - strand at 4831.779 kb on + strand at 4831.779 kb on + strand at 4831.779 kb on + strand at 4831.779 kb on + strand at 4831.779 kb on + strand at 4831.779 kb on + strand at 4831.779 kb on + strand at 4831.780 kb on - strand at 4831.780 kb on - strand at 4831.780 kb on - strand at 4831.780 kb on - strand at 4831.780 kb on - strand at 4831.780 kb on - strand at 4831.780 kb on - strand at 4831.780 kb on - strand at 4831.832 kb on - strand at 4831.832 kb on - strand at 4831.886 kb on - strand, within AO353_22065 at 4831.975 kb on - strand, within AO353_22065
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.006 mg/ml remove 4,829,678 - -1.3 4,829,678 - -1.3 4,829,721 + -1.3 4,829,722 - +0.3 4,829,722 - +2.1 4,829,782 + +3.0 4,829,812 + -1.3 4,829,812 + +0.4 4,829,813 - -1.9 4,829,848 + AO353_22055 0.11 -0.3 4,829,848 + AO353_22055 0.11 +1.7 4,829,848 + AO353_22055 0.11 -0.3 4,829,849 - AO353_22055 0.11 -0.3 4,829,849 - AO353_22055 0.11 +0.9 4,829,921 + AO353_22055 0.19 +0.7 4,829,921 + AO353_22055 0.19 -1.0 4,830,109 + AO353_22055 0.40 +1.7 4,830,109 + +1.7 4,830,109 + AO353_22055 0.40 -1.0 4,830,171 - AO353_22055 0.47 -1.9 4,830,171 - AO353_22055 0.47 +3.5 4,830,277 + AO353_22055 0.59 +1.1 4,830,278 - AO353_22055 0.59 +0.6 4,830,295 - AO353_22055 0.61 +2.3 4,830,343 - AO353_22055 0.66 -1.6 4,830,350 - AO353_22055 0.67 +0.5 4,830,440 + AO353_22055 0.77 +1.9 4,830,440 + AO353_22055 0.77 -1.9 4,830,452 - AO353_22055 0.79 -3.3 4,830,510 + AO353_22055 0.85 -0.3 4,830,533 - AO353_22055 0.88 +3.2 4,831,116 - +0.3 4,831,131 - +1.5 4,831,131 - -0.9 4,831,131 - +0.1 4,831,131 - -1.3 4,831,131 - +1.5 4,831,131 - +3.4 4,831,131 - -0.9 4,831,131 - +2.0 4,831,135 - -1.3 4,831,135 - -0.0 4,831,161 - -0.3 4,831,184 + +4.5 4,831,229 - +0.1 4,831,229 - +0.7 4,831,242 + -0.3 4,831,420 + +1.1 4,831,421 - -1.3 4,831,421 - +2.3 4,831,421 - +0.7 4,831,478 - -0.3 4,831,478 - +2.5 4,831,478 - +1.3 4,831,705 - -0.3 4,831,750 - -0.3 4,831,775 + -0.3 4,831,775 + -3.1 4,831,775 + -2.1 4,831,775 + +0.3 4,831,775 + +0.0 4,831,776 - -1.3 4,831,779 + -1.9 4,831,779 + -1.0 4,831,779 + -1.9 4,831,779 + +1.3 4,831,779 + -0.3 4,831,779 + -3.3 4,831,779 + +2.3 4,831,780 - +0.4 4,831,780 - -0.3 4,831,780 - +0.7 4,831,780 - +0.9 4,831,780 - -1.3 4,831,780 - -2.2 4,831,780 - -1.9 4,831,780 - -1.3 4,831,832 - +2.7 4,831,832 - -2.3 4,831,886 - AO353_22065 0.11 +2.3 4,831,975 - AO353_22065 0.33 -0.3
Or see this region's nucleotide sequence