Experiment: Cisplatin 0.006 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_20575 and AO353_20580 are separated by 80 nucleotides AO353_20580 and AO353_20585 are separated by 182 nucleotides AO353_20585 and AO353_20590 are separated by 29 nucleotides AO353_20590 and AO353_20595 are separated by 47 nucleotides AO353_20595 and AO353_20600 are separated by 105 nucleotides
AO353_20575: AO353_20575 - tRNA-Ala, at 4,514,961 to 4,515,036
_20575
AO353_20580: AO353_20580 - tRNA-Glu, at 4,515,117 to 4,515,192
_20580
AO353_20585: AO353_20585 - TetR family transcriptional regulator, at 4,515,375 to 4,515,914
_20585
AO353_20590: AO353_20590 - hydrolase, at 4,515,944 to 4,516,777
_20590
AO353_20595: AO353_20595 - 4-hydroxybenzoyl-CoA thioesterase, at 4,516,825 to 4,517,262
_20595
AO353_20600: AO353_20600 - tRNA-dihydrouridine synthase C, at 4,517,368 to 4,518,327
_20600
Position (kb)
4515
4516
4517 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 4515.026 kb on + strand, within AO353_20575 at 4515.082 kb on + strand at 4515.082 kb on + strand at 4515.215 kb on + strand at 4515.215 kb on + strand at 4515.215 kb on + strand at 4515.215 kb on + strand at 4515.215 kb on + strand at 4515.215 kb on + strand at 4515.215 kb on + strand at 4515.215 kb on + strand at 4515.215 kb on + strand at 4515.215 kb on + strand at 4515.217 kb on + strand at 4515.217 kb on + strand at 4515.217 kb on + strand at 4515.458 kb on + strand, within AO353_20585 at 4515.491 kb on + strand, within AO353_20585 at 4515.492 kb on - strand, within AO353_20585 at 4515.507 kb on + strand, within AO353_20585 at 4515.507 kb on + strand, within AO353_20585 at 4515.507 kb on + strand, within AO353_20585 at 4515.507 kb on + strand, within AO353_20585 at 4515.508 kb on - strand at 4515.642 kb on + strand, within AO353_20585 at 4515.642 kb on + strand, within AO353_20585 at 4515.910 kb on + strand at 4515.910 kb on + strand at 4515.910 kb on + strand at 4515.911 kb on - strand at 4515.911 kb on - strand at 4515.911 kb on - strand at 4515.954 kb on + strand at 4515.954 kb on + strand at 4515.954 kb on + strand at 4515.954 kb on + strand at 4515.954 kb on + strand at 4515.954 kb on + strand at 4515.954 kb on + strand at 4515.954 kb on + strand at 4515.954 kb on + strand at 4515.955 kb on - strand at 4515.955 kb on - strand at 4515.955 kb on - strand at 4515.955 kb on - strand at 4515.955 kb on - strand at 4516.212 kb on + strand, within AO353_20590 at 4516.213 kb on - strand, within AO353_20590 at 4516.562 kb on + strand, within AO353_20590 at 4516.563 kb on - strand, within AO353_20590 at 4516.573 kb on + strand, within AO353_20590 at 4516.573 kb on + strand, within AO353_20590 at 4516.786 kb on + strand at 4516.787 kb on - strand at 4516.851 kb on + strand at 4516.851 kb on + strand at 4516.852 kb on - strand at 4516.905 kb on + strand, within AO353_20595 at 4516.905 kb on + strand, within AO353_20595 at 4516.915 kb on + strand, within AO353_20595 at 4516.915 kb on + strand, within AO353_20595 at 4516.915 kb on + strand, within AO353_20595 at 4516.915 kb on + strand, within AO353_20595 at 4516.915 kb on + strand, within AO353_20595 at 4516.915 kb on + strand, within AO353_20595 at 4516.915 kb on + strand, within AO353_20595 at 4516.916 kb on - strand, within AO353_20595 at 4516.916 kb on - strand, within AO353_20595 at 4516.916 kb on - strand at 4516.916 kb on - strand, within AO353_20595 at 4516.916 kb on - strand, within AO353_20595 at 4516.961 kb on + strand, within AO353_20595 at 4517.029 kb on + strand, within AO353_20595 at 4517.029 kb on + strand, within AO353_20595 at 4517.030 kb on - strand, within AO353_20595 at 4517.044 kb on + strand, within AO353_20595 at 4517.304 kb on + strand at 4517.305 kb on - strand at 4517.335 kb on - strand at 4517.500 kb on + strand, within AO353_20600 at 4517.500 kb on + strand, within AO353_20600 at 4517.500 kb on + strand, within AO353_20600 at 4517.500 kb on + strand, within AO353_20600 at 4517.501 kb on - strand, within AO353_20600 at 4517.501 kb on - strand, within AO353_20600 at 4517.501 kb on - strand, within AO353_20600 at 4517.501 kb on - strand, within AO353_20600 at 4517.501 kb on - strand, within AO353_20600 at 4517.501 kb on - strand, within AO353_20600 at 4517.503 kb on + strand, within AO353_20600 at 4517.504 kb on - strand, within AO353_20600 at 4517.699 kb on + strand, within AO353_20600 at 4517.699 kb on + strand, within AO353_20600 at 4517.699 kb on + strand, within AO353_20600 at 4517.699 kb on + strand, within AO353_20600 at 4517.700 kb on - strand, within AO353_20600 at 4517.744 kb on + strand, within AO353_20600 at 4517.744 kb on + strand, within AO353_20600 at 4517.744 kb on + strand, within AO353_20600 at 4517.744 kb on + strand, within AO353_20600 at 4517.744 kb on + strand, within AO353_20600 at 4517.744 kb on + strand, within AO353_20600 at 4517.744 kb on + strand, within AO353_20600 at 4517.744 kb on + strand, within AO353_20600 at 4517.744 kb on + strand, within AO353_20600 at 4517.745 kb on - strand, within AO353_20600 at 4517.745 kb on - strand, within AO353_20600 at 4517.745 kb on - strand, within AO353_20600 at 4517.745 kb on - strand, within AO353_20600 at 4517.745 kb on - strand, within AO353_20600
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.006 mg/ml remove 4,515,026 + AO353_20575 0.86 -1.2 4,515,082 + -3.0 4,515,082 + -1.8 4,515,215 + -3.0 4,515,215 + +0.8 4,515,215 + +1.5 4,515,215 + +0.2 4,515,215 + -0.2 4,515,215 + -0.0 4,515,215 + -2.2 4,515,215 + -0.2 4,515,215 + +0.8 4,515,215 + +1.4 4,515,217 + -0.2 4,515,217 + -0.2 4,515,217 + -2.2 4,515,458 + AO353_20585 0.15 +2.4 4,515,491 + AO353_20585 0.21 +1.8 4,515,492 - AO353_20585 0.22 +1.8 4,515,507 + AO353_20585 0.24 -1.2 4,515,507 + AO353_20585 0.24 +0.6 4,515,507 + AO353_20585 0.24 -2.5 4,515,507 + AO353_20585 0.24 -0.2 4,515,508 - -0.2 4,515,642 + AO353_20585 0.49 +0.6 4,515,642 + AO353_20585 0.49 -2.2 4,515,910 + -1.1 4,515,910 + -1.2 4,515,910 + +0.4 4,515,911 - -1.8 4,515,911 - +0.8 4,515,911 - -1.5 4,515,954 + -1.8 4,515,954 + +0.8 4,515,954 + +0.1 4,515,954 + -1.2 4,515,954 + -1.8 4,515,954 + -1.2 4,515,954 + -2.0 4,515,954 + -1.8 4,515,954 + -1.2 4,515,955 - -1.8 4,515,955 - -0.2 4,515,955 - +1.8 4,515,955 - +2.1 4,515,955 - -1.0 4,516,212 + AO353_20590 0.32 -1.2 4,516,213 - AO353_20590 0.32 -2.2 4,516,562 + AO353_20590 0.74 -2.8 4,516,563 - AO353_20590 0.74 -1.2 4,516,573 + AO353_20590 0.75 -0.2 4,516,573 + AO353_20590 0.75 -1.2 4,516,786 + +1.8 4,516,787 - +0.1 4,516,851 + -0.2 4,516,851 + -2.0 4,516,852 - -1.5 4,516,905 + AO353_20595 0.18 -1.8 4,516,905 + AO353_20595 0.18 +1.2 4,516,915 + AO353_20595 0.21 +1.0 4,516,915 + AO353_20595 0.21 +2.7 4,516,915 + AO353_20595 0.21 +1.9 4,516,915 + AO353_20595 0.21 -1.2 4,516,915 + AO353_20595 0.21 +0.4 4,516,915 + AO353_20595 0.21 -0.6 4,516,915 + AO353_20595 0.21 +1.1 4,516,916 - AO353_20595 0.21 +1.4 4,516,916 - AO353_20595 0.21 +0.5 4,516,916 - -1.8 4,516,916 - AO353_20595 0.21 +1.2 4,516,916 - AO353_20595 0.21 +2.0 4,516,961 + AO353_20595 0.31 -0.2 4,517,029 + AO353_20595 0.47 +3.0 4,517,029 + AO353_20595 0.47 -1.8 4,517,030 - AO353_20595 0.47 -2.8 4,517,044 + AO353_20595 0.50 -0.2 4,517,304 + +3.5 4,517,305 - -1.8 4,517,335 - -2.2 4,517,500 + AO353_20600 0.14 -1.8 4,517,500 + AO353_20600 0.14 -1.8 4,517,500 + AO353_20600 0.14 -0.6 4,517,500 + AO353_20600 0.14 -2.5 4,517,501 - AO353_20600 0.14 -0.8 4,517,501 - AO353_20600 0.14 -2.8 4,517,501 - AO353_20600 0.14 +1.2 4,517,501 - AO353_20600 0.14 -0.2 4,517,501 - AO353_20600 0.14 -0.8 4,517,501 - AO353_20600 0.14 -2.5 4,517,503 + AO353_20600 0.14 -0.2 4,517,504 - AO353_20600 0.14 -1.4 4,517,699 + AO353_20600 0.34 +1.1 4,517,699 + AO353_20600 0.34 -0.5 4,517,699 + AO353_20600 0.34 -2.5 4,517,699 + AO353_20600 0.34 -2.2 4,517,700 - AO353_20600 0.35 -2.8 4,517,744 + AO353_20600 0.39 -1.8 4,517,744 + AO353_20600 0.39 -2.8 4,517,744 + AO353_20600 0.39 +0.4 4,517,744 + AO353_20600 0.39 +0.4 4,517,744 + AO353_20600 0.39 +1.0 4,517,744 + AO353_20600 0.39 +0.8 4,517,744 + AO353_20600 0.39 -1.8 4,517,744 + AO353_20600 0.39 +1.6 4,517,744 + AO353_20600 0.39 -1.8 4,517,745 - AO353_20600 0.39 -2.2 4,517,745 - AO353_20600 0.39 -1.8 4,517,745 - AO353_20600 0.39 +1.8 4,517,745 - AO353_20600 0.39 -1.8 4,517,745 - AO353_20600 0.39 +0.6
Or see this region's nucleotide sequence