Experiment: Cisplatin 0.006 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_19495 and AO353_19500 overlap by 11 nucleotides AO353_19500 and AO353_19505 overlap by 4 nucleotides
AO353_19495: AO353_19495 - ABC transporter ATP-binding protein, at 4,271,724 to 4,273,442
_19495
AO353_19500: AO353_19500 - peptidase S8 and S53 subtilisin kexin sedolisin, at 4,273,432 to 4,274,109
_19500
AO353_19505: AO353_19505 - FAD-dependent oxidoreductase, at 4,274,106 to 4,275,401
_19505
Position (kb) 4273
4274
4275 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 4272.456 kb on + strand, within AO353_19495 at 4272.456 kb on + strand, within AO353_19495 at 4272.457 kb on - strand, within AO353_19495 at 4272.457 kb on - strand, within AO353_19495 at 4272.469 kb on + strand, within AO353_19495 at 4272.470 kb on - strand, within AO353_19495 at 4272.470 kb on - strand, within AO353_19495 at 4272.561 kb on + strand, within AO353_19495 at 4272.615 kb on + strand, within AO353_19495 at 4272.615 kb on + strand, within AO353_19495 at 4272.615 kb on + strand, within AO353_19495 at 4272.615 kb on + strand, within AO353_19495 at 4272.660 kb on + strand, within AO353_19495 at 4272.660 kb on + strand, within AO353_19495 at 4272.660 kb on + strand, within AO353_19495 at 4272.660 kb on + strand, within AO353_19495 at 4272.660 kb on + strand, within AO353_19495 at 4272.660 kb on + strand, within AO353_19495 at 4272.661 kb on - strand, within AO353_19495 at 4272.661 kb on - strand, within AO353_19495 at 4272.661 kb on - strand, within AO353_19495 at 4272.661 kb on - strand, within AO353_19495 at 4272.661 kb on - strand, within AO353_19495 at 4272.661 kb on - strand, within AO353_19495 at 4272.824 kb on - strand, within AO353_19495 at 4273.063 kb on - strand, within AO353_19495 at 4273.334 kb on + strand at 4273.334 kb on + strand at 4273.334 kb on + strand at 4273.334 kb on + strand at 4273.421 kb on + strand at 4273.421 kb on + strand at 4273.421 kb on + strand at 4273.421 kb on + strand at 4273.422 kb on - strand at 4273.422 kb on - strand at 4273.422 kb on - strand at 4273.422 kb on - strand at 4273.446 kb on - strand at 4273.517 kb on - strand, within AO353_19500 at 4273.951 kb on + strand, within AO353_19500 at 4273.951 kb on + strand, within AO353_19500 at 4273.951 kb on + strand, within AO353_19500 at 4273.952 kb on - strand, within AO353_19500 at 4273.952 kb on - strand, within AO353_19500 at 4273.952 kb on - strand, within AO353_19500 at 4274.178 kb on + strand at 4274.680 kb on - strand, within AO353_19505 at 4274.742 kb on + strand, within AO353_19505 at 4274.743 kb on - strand, within AO353_19505 at 4274.743 kb on - strand, within AO353_19505 at 4274.984 kb on + strand, within AO353_19505 at 4275.075 kb on + strand, within AO353_19505 at 4275.076 kb on - strand, within AO353_19505 at 4275.076 kb on - strand, within AO353_19505
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.006 mg/ml remove 4,272,456 + AO353_19495 0.43 -2.2 4,272,456 + AO353_19495 0.43 +2.1 4,272,457 - AO353_19495 0.43 +0.8 4,272,457 - AO353_19495 0.43 +0.9 4,272,469 + AO353_19495 0.43 +0.5 4,272,470 - AO353_19495 0.43 +1.4 4,272,470 - AO353_19495 0.43 +0.5 4,272,561 + AO353_19495 0.49 -1.2 4,272,615 + AO353_19495 0.52 -0.8 4,272,615 + AO353_19495 0.52 +1.0 4,272,615 + AO353_19495 0.52 -0.6 4,272,615 + AO353_19495 0.52 -1.2 4,272,660 + AO353_19495 0.54 -3.0 4,272,660 + AO353_19495 0.54 -1.8 4,272,660 + AO353_19495 0.54 -2.8 4,272,660 + AO353_19495 0.54 -3.2 4,272,660 + AO353_19495 0.54 -0.4 4,272,660 + AO353_19495 0.54 -0.2 4,272,661 - AO353_19495 0.55 +0.9 4,272,661 - AO353_19495 0.55 -2.2 4,272,661 - AO353_19495 0.55 -0.9 4,272,661 - AO353_19495 0.55 -1.0 4,272,661 - AO353_19495 0.55 -0.2 4,272,661 - AO353_19495 0.55 -1.8 4,272,824 - AO353_19495 0.64 -0.8 4,273,063 - AO353_19495 0.78 -1.2 4,273,334 + -1.2 4,273,334 + +0.2 4,273,334 + +1.0 4,273,334 + +0.5 4,273,421 + +2.6 4,273,421 + +0.5 4,273,421 + -1.2 4,273,421 + -1.2 4,273,422 - -2.8 4,273,422 - -1.2 4,273,422 - +1.4 4,273,422 - -1.8 4,273,446 - +0.5 4,273,517 - AO353_19500 0.13 -2.5 4,273,951 + AO353_19500 0.77 +1.0 4,273,951 + AO353_19500 0.77 -2.2 4,273,951 + AO353_19500 0.77 +2.6 4,273,952 - AO353_19500 0.77 -0.2 4,273,952 - AO353_19500 0.77 -1.2 4,273,952 - AO353_19500 0.77 +2.0 4,274,178 + -1.2 4,274,680 - AO353_19505 0.44 +0.4 4,274,742 + AO353_19505 0.49 -3.4 4,274,743 - AO353_19505 0.49 -2.8 4,274,743 - AO353_19505 0.49 -1.2 4,274,984 + AO353_19505 0.68 +2.2 4,275,075 + AO353_19505 0.75 -1.8 4,275,076 - AO353_19505 0.75 -0.2 4,275,076 - AO353_19505 0.75 -0.6
Or see this region's nucleotide sequence