Experiment: Cisplatin 0.006 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_18400 and AO353_18405 are separated by 197 nucleotides AO353_18405 and AO353_18410 are separated by 12 nucleotides AO353_18410 and AO353_18415 are separated by 52 nucleotides
AO353_18400: AO353_18400 - agmatinase, at 4,053,332 to 4,054,282
_18400
AO353_18405: AO353_18405 - LysR family transcriptional regulator, at 4,054,480 to 4,055,373
_18405
AO353_18410: AO353_18410 - hypothetical protein, at 4,055,386 to 4,055,985
_18410
AO353_18415: AO353_18415 - hypothetical protein, at 4,056,038 to 4,057,978
_18415
Position (kb)
4054
4055
4056 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 4053.576 kb on + strand, within AO353_18400 at 4053.576 kb on + strand, within AO353_18400 at 4053.577 kb on - strand, within AO353_18400 at 4053.577 kb on - strand, within AO353_18400 at 4053.577 kb on - strand, within AO353_18400 at 4053.706 kb on - strand, within AO353_18400 at 4053.706 kb on - strand, within AO353_18400 at 4053.706 kb on - strand, within AO353_18400 at 4053.706 kb on - strand, within AO353_18400 at 4053.957 kb on + strand, within AO353_18400 at 4053.957 kb on + strand, within AO353_18400 at 4053.957 kb on + strand, within AO353_18400 at 4053.957 kb on + strand, within AO353_18400 at 4053.957 kb on + strand, within AO353_18400 at 4053.958 kb on - strand, within AO353_18400 at 4053.958 kb on - strand, within AO353_18400 at 4053.958 kb on - strand, within AO353_18400 at 4054.071 kb on + strand, within AO353_18400 at 4054.072 kb on - strand, within AO353_18400 at 4054.141 kb on + strand, within AO353_18400 at 4054.142 kb on - strand, within AO353_18400 at 4054.142 kb on - strand, within AO353_18400 at 4054.142 kb on - strand, within AO353_18400 at 4054.308 kb on + strand at 4054.308 kb on + strand at 4054.308 kb on + strand at 4054.308 kb on + strand at 4054.308 kb on + strand at 4054.308 kb on + strand at 4054.308 kb on + strand at 4054.308 kb on + strand at 4054.308 kb on + strand at 4054.308 kb on + strand at 4054.308 kb on + strand at 4054.309 kb on - strand at 4054.309 kb on - strand at 4054.309 kb on - strand at 4054.309 kb on - strand at 4054.309 kb on - strand at 4054.309 kb on - strand at 4054.312 kb on + strand at 4054.312 kb on + strand at 4054.312 kb on + strand at 4054.313 kb on - strand at 4054.313 kb on - strand at 4054.371 kb on + strand at 4054.371 kb on + strand at 4054.371 kb on + strand at 4054.371 kb on + strand at 4054.371 kb on + strand at 4054.372 kb on - strand at 4054.372 kb on - strand at 4054.372 kb on - strand at 4054.372 kb on - strand at 4054.372 kb on - strand at 4054.403 kb on + strand at 4054.403 kb on + strand at 4054.403 kb on + strand at 4054.407 kb on + strand at 4054.407 kb on + strand at 4054.407 kb on + strand at 4054.408 kb on - strand at 4054.408 kb on - strand at 4054.427 kb on + strand at 4054.445 kb on + strand at 4054.446 kb on - strand at 4054.597 kb on + strand, within AO353_18405 at 4054.597 kb on + strand, within AO353_18405 at 4054.597 kb on + strand, within AO353_18405 at 4054.597 kb on + strand, within AO353_18405 at 4054.597 kb on + strand, within AO353_18405 at 4054.597 kb on + strand, within AO353_18405 at 4054.597 kb on + strand, within AO353_18405 at 4054.597 kb on + strand, within AO353_18405 at 4054.597 kb on + strand, within AO353_18405 at 4054.597 kb on + strand, within AO353_18405 at 4054.598 kb on - strand, within AO353_18405 at 4054.598 kb on - strand, within AO353_18405 at 4054.598 kb on - strand, within AO353_18405 at 4054.598 kb on - strand, within AO353_18405 at 4054.598 kb on - strand, within AO353_18405 at 4054.598 kb on - strand, within AO353_18405 at 4054.735 kb on + strand, within AO353_18405 at 4054.736 kb on - strand, within AO353_18405 at 4054.736 kb on - strand, within AO353_18405 at 4054.736 kb on - strand, within AO353_18405 at 4054.840 kb on + strand, within AO353_18405 at 4054.841 kb on - strand, within AO353_18405 at 4054.972 kb on + strand, within AO353_18405 at 4054.972 kb on + strand, within AO353_18405 at 4054.972 kb on + strand, within AO353_18405 at 4054.972 kb on + strand, within AO353_18405 at 4054.972 kb on + strand, within AO353_18405 at 4054.973 kb on - strand, within AO353_18405 at 4054.973 kb on - strand, within AO353_18405 at 4054.973 kb on - strand, within AO353_18405 at 4055.005 kb on + strand, within AO353_18405 at 4055.005 kb on + strand, within AO353_18405 at 4055.005 kb on + strand, within AO353_18405 at 4055.005 kb on + strand, within AO353_18405 at 4055.006 kb on - strand, within AO353_18405 at 4055.006 kb on - strand, within AO353_18405 at 4055.006 kb on - strand, within AO353_18405 at 4055.006 kb on - strand, within AO353_18405 at 4055.006 kb on - strand, within AO353_18405 at 4055.006 kb on - strand, within AO353_18405 at 4055.006 kb on - strand, within AO353_18405 at 4055.006 kb on - strand, within AO353_18405 at 4055.151 kb on + strand, within AO353_18405 at 4055.152 kb on - strand, within AO353_18405 at 4055.188 kb on + strand, within AO353_18405 at 4055.188 kb on + strand, within AO353_18405 at 4055.188 kb on + strand, within AO353_18405 at 4055.188 kb on + strand, within AO353_18405 at 4055.189 kb on - strand, within AO353_18405 at 4055.189 kb on - strand, within AO353_18405 at 4055.189 kb on - strand, within AO353_18405 at 4055.212 kb on + strand, within AO353_18405 at 4055.212 kb on + strand, within AO353_18405 at 4055.212 kb on + strand, within AO353_18405 at 4055.212 kb on + strand, within AO353_18405 at 4055.213 kb on - strand, within AO353_18405 at 4055.385 kb on + strand at 4055.385 kb on + strand at 4055.385 kb on + strand at 4055.385 kb on + strand at 4055.385 kb on + strand at 4055.662 kb on + strand, within AO353_18410 at 4055.662 kb on + strand, within AO353_18410 at 4055.662 kb on + strand, within AO353_18410 at 4055.663 kb on - strand, within AO353_18410 at 4055.663 kb on - strand, within AO353_18410 at 4055.663 kb on - strand, within AO353_18410 at 4055.664 kb on + strand, within AO353_18410 at 4055.664 kb on + strand, within AO353_18410 at 4055.664 kb on + strand, within AO353_18410 at 4055.665 kb on - strand, within AO353_18410 at 4055.665 kb on - strand, within AO353_18410 at 4055.897 kb on + strand, within AO353_18410 at 4055.956 kb on + strand at 4055.956 kb on + strand at 4055.956 kb on + strand at 4055.956 kb on + strand at 4055.956 kb on + strand at 4055.964 kb on + strand at 4055.965 kb on - strand at 4055.965 kb on - strand at 4055.965 kb on - strand at 4055.983 kb on + strand at 4055.983 kb on + strand at 4055.984 kb on - strand at 4055.984 kb on - strand at 4056.007 kb on + strand at 4056.007 kb on + strand at 4056.007 kb on + strand at 4056.007 kb on + strand at 4056.008 kb on - strand at 4056.026 kb on + strand at 4056.036 kb on + strand at 4056.036 kb on + strand at 4056.036 kb on + strand at 4056.036 kb on + strand at 4056.036 kb on + strand at 4056.037 kb on - strand at 4056.037 kb on - strand at 4056.037 kb on - strand at 4056.037 kb on - strand at 4056.039 kb on + strand at 4056.039 kb on + strand at 4056.039 kb on + strand at 4056.039 kb on + strand at 4056.039 kb on + strand at 4056.039 kb on + strand at 4056.039 kb on + strand at 4056.039 kb on + strand at 4056.039 kb on + strand at 4056.039 kb on + strand at 4056.039 kb on + strand at 4056.039 kb on + strand at 4056.039 kb on + strand at 4056.039 kb on + strand at 4056.040 kb on - strand at 4056.040 kb on - strand at 4056.040 kb on - strand at 4056.040 kb on - strand at 4056.040 kb on - strand at 4056.040 kb on - strand at 4056.040 kb on - strand at 4056.040 kb on - strand at 4056.040 kb on - strand at 4056.125 kb on + strand at 4056.125 kb on + strand at 4056.126 kb on - strand at 4056.126 kb on - strand at 4056.126 kb on - strand at 4056.225 kb on + strand at 4056.225 kb on + strand at 4056.225 kb on + strand at 4056.225 kb on + strand at 4056.225 kb on + strand at 4056.225 kb on + strand at 4056.226 kb on - strand at 4056.226 kb on - strand at 4056.226 kb on - strand at 4056.226 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.006 mg/ml remove 4,053,576 + AO353_18400 0.26 -0.5 4,053,576 + AO353_18400 0.26 +2.4 4,053,577 - AO353_18400 0.26 -0.2 4,053,577 - AO353_18400 0.26 -3.5 4,053,577 - AO353_18400 0.26 -0.3 4,053,706 - AO353_18400 0.39 -0.9 4,053,706 - AO353_18400 0.39 -1.2 4,053,706 - AO353_18400 0.39 +2.6 4,053,706 - AO353_18400 0.39 -0.6 4,053,957 + AO353_18400 0.66 +0.8 4,053,957 + AO353_18400 0.66 +1.6 4,053,957 + AO353_18400 0.66 -1.3 4,053,957 + AO353_18400 0.66 +0.8 4,053,957 + AO353_18400 0.66 -0.9 4,053,958 - AO353_18400 0.66 -2.5 4,053,958 - AO353_18400 0.66 -1.2 4,053,958 - AO353_18400 0.66 -2.8 4,054,071 + AO353_18400 0.78 -2.2 4,054,072 - AO353_18400 0.78 +0.8 4,054,141 + AO353_18400 0.85 -0.2 4,054,142 - AO353_18400 0.85 -0.3 4,054,142 - AO353_18400 0.85 -1.8 4,054,142 - AO353_18400 0.85 -1.8 4,054,308 + -1.8 4,054,308 + -1.2 4,054,308 + -0.4 4,054,308 + -1.2 4,054,308 + +1.5 4,054,308 + -1.8 4,054,308 + +2.0 4,054,308 + -2.2 4,054,308 + -0.2 4,054,308 + -1.8 4,054,308 + +0.2 4,054,309 - -0.2 4,054,309 - -2.8 4,054,309 - +0.8 4,054,309 - -0.2 4,054,309 - +0.8 4,054,309 - +0.7 4,054,312 + +0.8 4,054,312 + +1.3 4,054,312 + -0.2 4,054,313 - +0.4 4,054,313 - +1.4 4,054,371 + -0.2 4,054,371 + -2.2 4,054,371 + -0.8 4,054,371 + -0.9 4,054,371 + -2.5 4,054,372 - +0.4 4,054,372 - +1.7 4,054,372 - -0.2 4,054,372 - -0.2 4,054,372 - -0.2 4,054,403 + -0.2 4,054,403 + +0.8 4,054,403 + -1.2 4,054,407 + +0.8 4,054,407 + +0.2 4,054,407 + +1.2 4,054,408 - -1.8 4,054,408 - -0.3 4,054,427 + -1.2 4,054,445 + -0.8 4,054,446 - -0.2 4,054,597 + AO353_18405 0.13 +0.8 4,054,597 + AO353_18405 0.13 +3.5 4,054,597 + AO353_18405 0.13 -0.2 4,054,597 + AO353_18405 0.13 -0.8 4,054,597 + AO353_18405 0.13 -0.2 4,054,597 + AO353_18405 0.13 +0.6 4,054,597 + AO353_18405 0.13 -0.2 4,054,597 + AO353_18405 0.13 +0.8 4,054,597 + AO353_18405 0.13 -2.2 4,054,597 + AO353_18405 0.13 -2.2 4,054,598 - AO353_18405 0.13 +0.2 4,054,598 - AO353_18405 0.13 +0.2 4,054,598 - AO353_18405 0.13 -1.8 4,054,598 - AO353_18405 0.13 +0.5 4,054,598 - AO353_18405 0.13 -0.6 4,054,598 - AO353_18405 0.13 -0.8 4,054,735 + AO353_18405 0.29 -1.2 4,054,736 - AO353_18405 0.29 +1.3 4,054,736 - AO353_18405 0.29 +0.4 4,054,736 - AO353_18405 0.29 +0.8 4,054,840 + AO353_18405 0.40 -2.2 4,054,841 - AO353_18405 0.40 -1.8 4,054,972 + AO353_18405 0.55 -1.8 4,054,972 + AO353_18405 0.55 -0.2 4,054,972 + AO353_18405 0.55 -0.2 4,054,972 + AO353_18405 0.55 -0.2 4,054,972 + AO353_18405 0.55 -3.2 4,054,973 - AO353_18405 0.55 -2.2 4,054,973 - AO353_18405 0.55 -1.2 4,054,973 - AO353_18405 0.55 -1.8 4,055,005 + AO353_18405 0.59 -0.2 4,055,005 + AO353_18405 0.59 -1.2 4,055,005 + AO353_18405 0.59 +1.2 4,055,005 + AO353_18405 0.59 -0.2 4,055,006 - AO353_18405 0.59 -0.9 4,055,006 - AO353_18405 0.59 -1.2 4,055,006 - AO353_18405 0.59 +3.4 4,055,006 - AO353_18405 0.59 -2.2 4,055,006 - AO353_18405 0.59 -0.9 4,055,006 - AO353_18405 0.59 -2.2 4,055,006 - AO353_18405 0.59 -3.6 4,055,006 - AO353_18405 0.59 -1.2 4,055,151 + AO353_18405 0.75 -1.2 4,055,152 - AO353_18405 0.75 +1.6 4,055,188 + AO353_18405 0.79 -1.8 4,055,188 + AO353_18405 0.79 -0.2 4,055,188 + AO353_18405 0.79 +1.5 4,055,188 + AO353_18405 0.79 +2.6 4,055,189 - AO353_18405 0.79 +2.8 4,055,189 - AO353_18405 0.79 +1.1 4,055,189 - AO353_18405 0.79 +1.4 4,055,212 + AO353_18405 0.82 -0.2 4,055,212 + AO353_18405 0.82 -0.2 4,055,212 + AO353_18405 0.82 -1.8 4,055,212 + AO353_18405 0.82 -2.8 4,055,213 - AO353_18405 0.82 +0.5 4,055,385 + +0.4 4,055,385 + -0.2 4,055,385 + -1.8 4,055,385 + +2.7 4,055,385 + -1.6 4,055,662 + AO353_18410 0.46 -0.2 4,055,662 + AO353_18410 0.46 +1.6 4,055,662 + AO353_18410 0.46 +1.0 4,055,663 - AO353_18410 0.46 -0.2 4,055,663 - AO353_18410 0.46 +0.6 4,055,663 - AO353_18410 0.46 -0.5 4,055,664 + AO353_18410 0.46 -1.2 4,055,664 + AO353_18410 0.46 +0.8 4,055,664 + AO353_18410 0.46 -2.2 4,055,665 - AO353_18410 0.47 -2.8 4,055,665 - AO353_18410 0.47 +1.6 4,055,897 + AO353_18410 0.85 +2.8 4,055,956 + +0.2 4,055,956 + -1.2 4,055,956 + +0.2 4,055,956 + +2.4 4,055,956 + -1.8 4,055,964 + -1.2 4,055,965 - +0.0 4,055,965 - -2.2 4,055,965 - +0.4 4,055,983 + -0.2 4,055,983 + +1.2 4,055,984 - -1.0 4,055,984 - +1.6 4,056,007 + +1.7 4,056,007 + -1.8 4,056,007 + -1.5 4,056,007 + +2.2 4,056,008 - -2.8 4,056,026 + -0.2 4,056,036 + +0.8 4,056,036 + -3.0 4,056,036 + +2.2 4,056,036 + +1.2 4,056,036 + -1.2 4,056,037 - +0.1 4,056,037 - +0.1 4,056,037 - -2.5 4,056,037 - +2.4 4,056,039 + -0.2 4,056,039 + +1.1 4,056,039 + +3.2 4,056,039 + +1.3 4,056,039 + +0.2 4,056,039 + -0.2 4,056,039 + -0.6 4,056,039 + -2.5 4,056,039 + +1.2 4,056,039 + -2.8 4,056,039 + +0.1 4,056,039 + -2.2 4,056,039 + -1.0 4,056,039 + -2.6 4,056,040 - +0.8 4,056,040 - -1.8 4,056,040 - -0.2 4,056,040 - -0.2 4,056,040 - -0.9 4,056,040 - -0.8 4,056,040 - +2.5 4,056,040 - +0.3 4,056,040 - -1.2 4,056,125 + +0.8 4,056,125 + -1.2 4,056,126 - +0.4 4,056,126 - -0.2 4,056,126 - -2.5 4,056,225 + +2.2 4,056,225 + +0.1 4,056,225 + +0.2 4,056,225 + +0.6 4,056,225 + +1.1 4,056,225 + -1.8 4,056,226 - +3.0 4,056,226 - -1.8 4,056,226 - -1.2 4,056,226 - -0.8
Or see this region's nucleotide sequence