Experiment: Cisplatin 0.006 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_17555 and AO353_17560 are separated by 131 nucleotides AO353_17560 and AO353_17565 are separated by 173 nucleotides
AO353_17555: AO353_17555 - enoyl-CoA hydratase, at 3,870,365 to 3,871,477
_17555
AO353_17560: AO353_17560 - uracil-DNA glycosylase, at 3,871,609 to 3,872,301
_17560
AO353_17565: AO353_17565 - hypothetical protein, at 3,872,475 to 3,873,512
_17565
Position (kb)
3871
3872
3873 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3870.722 kb on + strand, within AO353_17555 at 3870.722 kb on + strand, within AO353_17555 at 3870.722 kb on + strand, within AO353_17555 at 3870.722 kb on + strand, within AO353_17555 at 3870.722 kb on + strand, within AO353_17555 at 3870.722 kb on + strand, within AO353_17555 at 3870.722 kb on + strand, within AO353_17555 at 3870.722 kb on + strand at 3870.723 kb on - strand, within AO353_17555 at 3870.723 kb on - strand, within AO353_17555 at 3870.723 kb on - strand, within AO353_17555 at 3870.723 kb on - strand, within AO353_17555 at 3870.723 kb on - strand, within AO353_17555 at 3870.723 kb on - strand, within AO353_17555 at 3870.723 kb on - strand, within AO353_17555 at 3870.880 kb on + strand, within AO353_17555 at 3870.880 kb on + strand, within AO353_17555 at 3870.881 kb on - strand, within AO353_17555 at 3871.132 kb on - strand, within AO353_17555 at 3871.159 kb on + strand, within AO353_17555 at 3871.159 kb on + strand, within AO353_17555 at 3871.160 kb on - strand, within AO353_17555 at 3871.165 kb on - strand, within AO353_17555 at 3871.165 kb on - strand, within AO353_17555 at 3871.246 kb on + strand, within AO353_17555 at 3871.247 kb on - strand, within AO353_17555 at 3871.247 kb on - strand, within AO353_17555 at 3871.509 kb on + strand at 3871.509 kb on + strand at 3871.509 kb on + strand at 3871.510 kb on - strand at 3871.510 kb on - strand at 3871.520 kb on + strand at 3871.604 kb on + strand at 3871.605 kb on - strand at 3871.605 kb on - strand at 3871.626 kb on + strand at 3871.627 kb on - strand at 3871.681 kb on + strand, within AO353_17560 at 3871.681 kb on + strand, within AO353_17560 at 3871.681 kb on + strand, within AO353_17560 at 3871.681 kb on + strand, within AO353_17560 at 3871.681 kb on + strand, within AO353_17560 at 3871.681 kb on + strand, within AO353_17560 at 3871.681 kb on + strand, within AO353_17560 at 3871.681 kb on + strand, within AO353_17560 at 3871.681 kb on + strand, within AO353_17560 at 3871.681 kb on + strand, within AO353_17560 at 3871.681 kb on + strand, within AO353_17560 at 3871.681 kb on + strand, within AO353_17560 at 3871.681 kb on + strand, within AO353_17560 at 3871.682 kb on - strand, within AO353_17560 at 3871.682 kb on - strand, within AO353_17560 at 3871.682 kb on - strand, within AO353_17560 at 3871.682 kb on - strand, within AO353_17560 at 3871.682 kb on - strand, within AO353_17560 at 3871.682 kb on - strand, within AO353_17560 at 3871.682 kb on - strand, within AO353_17560 at 3871.682 kb on - strand, within AO353_17560 at 3871.682 kb on - strand, within AO353_17560 at 3871.682 kb on - strand, within AO353_17560 at 3871.682 kb on - strand, within AO353_17560 at 3871.682 kb on - strand, within AO353_17560 at 3871.682 kb on - strand, within AO353_17560 at 3871.682 kb on - strand, within AO353_17560 at 3871.682 kb on - strand, within AO353_17560 at 3871.682 kb on - strand, within AO353_17560 at 3871.682 kb on - strand, within AO353_17560 at 3871.682 kb on - strand, within AO353_17560 at 3871.682 kb on - strand, within AO353_17560 at 3871.682 kb on - strand, within AO353_17560 at 3871.682 kb on - strand, within AO353_17560 at 3871.682 kb on - strand, within AO353_17560 at 3871.682 kb on - strand, within AO353_17560 at 3871.682 kb on - strand, within AO353_17560 at 3871.738 kb on + strand, within AO353_17560 at 3871.903 kb on + strand, within AO353_17560 at 3871.903 kb on + strand, within AO353_17560 at 3871.903 kb on + strand, within AO353_17560 at 3871.903 kb on + strand, within AO353_17560 at 3871.903 kb on + strand, within AO353_17560 at 3871.903 kb on + strand, within AO353_17560 at 3871.903 kb on + strand, within AO353_17560 at 3871.903 kb on + strand, within AO353_17560 at 3871.903 kb on + strand, within AO353_17560 at 3871.903 kb on + strand, within AO353_17560 at 3871.903 kb on + strand, within AO353_17560 at 3871.903 kb on + strand, within AO353_17560 at 3871.903 kb on + strand, within AO353_17560 at 3871.904 kb on - strand, within AO353_17560 at 3871.904 kb on - strand, within AO353_17560 at 3871.904 kb on - strand, within AO353_17560 at 3871.904 kb on - strand, within AO353_17560 at 3871.904 kb on - strand, within AO353_17560 at 3871.904 kb on - strand, within AO353_17560 at 3871.904 kb on - strand, within AO353_17560 at 3871.904 kb on - strand, within AO353_17560 at 3871.904 kb on - strand, within AO353_17560 at 3871.904 kb on - strand, within AO353_17560 at 3871.904 kb on - strand, within AO353_17560 at 3871.904 kb on - strand, within AO353_17560 at 3871.904 kb on - strand, within AO353_17560 at 3871.904 kb on - strand, within AO353_17560 at 3871.905 kb on + strand, within AO353_17560 at 3871.905 kb on + strand, within AO353_17560 at 3871.906 kb on - strand, within AO353_17560 at 3871.906 kb on - strand, within AO353_17560 at 3871.906 kb on - strand, within AO353_17560 at 3871.906 kb on - strand, within AO353_17560 at 3871.906 kb on - strand, within AO353_17560 at 3871.952 kb on - strand, within AO353_17560 at 3872.056 kb on - strand, within AO353_17560 at 3872.248 kb on + strand at 3872.248 kb on + strand at 3872.248 kb on + strand at 3872.248 kb on + strand at 3872.249 kb on - strand at 3872.249 kb on - strand at 3872.249 kb on - strand at 3872.249 kb on - strand at 3872.414 kb on + strand at 3872.414 kb on + strand at 3872.414 kb on + strand at 3872.414 kb on + strand at 3872.414 kb on + strand at 3872.414 kb on + strand at 3872.414 kb on + strand at 3872.414 kb on + strand at 3872.414 kb on + strand at 3872.414 kb on + strand at 3872.414 kb on + strand at 3872.415 kb on - strand at 3872.415 kb on - strand at 3872.415 kb on - strand at 3872.415 kb on - strand at 3872.415 kb on - strand at 3872.415 kb on - strand at 3872.415 kb on - strand at 3872.415 kb on - strand at 3872.415 kb on - strand at 3872.415 kb on - strand at 3872.415 kb on - strand at 3872.415 kb on - strand at 3872.415 kb on - strand at 3872.415 kb on - strand at 3872.422 kb on - strand at 3872.422 kb on - strand at 3872.422 kb on - strand at 3872.430 kb on + strand at 3872.504 kb on - strand at 3872.504 kb on - strand at 3872.847 kb on + strand, within AO353_17565 at 3872.847 kb on + strand, within AO353_17565 at 3872.847 kb on + strand, within AO353_17565 at 3872.848 kb on - strand, within AO353_17565 at 3872.848 kb on - strand, within AO353_17565 at 3872.848 kb on - strand, within AO353_17565 at 3872.848 kb on - strand, within AO353_17565 at 3872.848 kb on - strand, within AO353_17565 at 3873.025 kb on + strand at 3873.025 kb on + strand, within AO353_17565 at 3873.025 kb on + strand, within AO353_17565 at 3873.025 kb on + strand, within AO353_17565 at 3873.025 kb on + strand, within AO353_17565 at 3873.025 kb on + strand, within AO353_17565 at 3873.026 kb on - strand, within AO353_17565 at 3873.026 kb on - strand, within AO353_17565 at 3873.026 kb on - strand, within AO353_17565 at 3873.026 kb on - strand, within AO353_17565 at 3873.026 kb on - strand, within AO353_17565 at 3873.026 kb on - strand, within AO353_17565 at 3873.026 kb on - strand, within AO353_17565 at 3873.026 kb on - strand, within AO353_17565
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.006 mg/ml remove 3,870,722 + AO353_17555 0.32 -0.0 3,870,722 + AO353_17555 0.32 -2.0 3,870,722 + AO353_17555 0.32 -1.0 3,870,722 + AO353_17555 0.32 -2.9 3,870,722 + AO353_17555 0.32 +0.5 3,870,722 + AO353_17555 0.32 +3.1 3,870,722 + AO353_17555 0.32 +2.3 3,870,722 + -0.0 3,870,723 - AO353_17555 0.32 -1.6 3,870,723 - AO353_17555 0.32 +1.3 3,870,723 - AO353_17555 0.32 -1.6 3,870,723 - AO353_17555 0.32 +1.5 3,870,723 - AO353_17555 0.32 +3.0 3,870,723 - AO353_17555 0.32 -0.0 3,870,723 - AO353_17555 0.32 +1.0 3,870,880 + AO353_17555 0.46 -1.6 3,870,880 + AO353_17555 0.46 +2.1 3,870,881 - AO353_17555 0.46 -0.0 3,871,132 - AO353_17555 0.69 -1.0 3,871,159 + AO353_17555 0.71 -2.9 3,871,159 + AO353_17555 0.71 -0.3 3,871,160 - AO353_17555 0.71 +1.7 3,871,165 - AO353_17555 0.72 +1.0 3,871,165 - AO353_17555 0.72 +2.3 3,871,246 + AO353_17555 0.79 -1.6 3,871,247 - AO353_17555 0.79 -1.0 3,871,247 - AO353_17555 0.79 -0.4 3,871,509 + +2.0 3,871,509 + -3.4 3,871,509 + -1.6 3,871,510 - -3.2 3,871,510 - -1.0 3,871,520 + +1.0 3,871,604 + +1.5 3,871,605 - -1.0 3,871,605 - -0.9 3,871,626 + -2.4 3,871,627 - -1.3 3,871,681 + AO353_17560 0.10 -2.0 3,871,681 + AO353_17560 0.10 +0.1 3,871,681 + AO353_17560 0.10 -1.0 3,871,681 + AO353_17560 0.10 -1.0 3,871,681 + AO353_17560 0.10 -2.6 3,871,681 + AO353_17560 0.10 -0.0 3,871,681 + AO353_17560 0.10 -1.5 3,871,681 + AO353_17560 0.10 -2.0 3,871,681 + AO353_17560 0.10 +1.0 3,871,681 + AO353_17560 0.10 -0.0 3,871,681 + AO353_17560 0.10 -2.4 3,871,681 + AO353_17560 0.10 -2.0 3,871,681 + AO353_17560 0.10 -0.0 3,871,682 - AO353_17560 0.11 -1.6 3,871,682 - AO353_17560 0.11 +0.7 3,871,682 - AO353_17560 0.11 -2.6 3,871,682 - AO353_17560 0.11 -0.0 3,871,682 - AO353_17560 0.11 -1.9 3,871,682 - AO353_17560 0.11 -2.0 3,871,682 - AO353_17560 0.11 -1.6 3,871,682 - AO353_17560 0.11 -3.0 3,871,682 - AO353_17560 0.11 -1.0 3,871,682 - AO353_17560 0.11 -1.0 3,871,682 - AO353_17560 0.11 +2.3 3,871,682 - AO353_17560 0.11 -1.0 3,871,682 - AO353_17560 0.11 -2.0 3,871,682 - AO353_17560 0.11 -0.0 3,871,682 - AO353_17560 0.11 -3.2 3,871,682 - AO353_17560 0.11 -0.0 3,871,682 - AO353_17560 0.11 -2.0 3,871,682 - AO353_17560 0.11 +1.1 3,871,682 - AO353_17560 0.11 -0.0 3,871,682 - AO353_17560 0.11 +1.0 3,871,682 - AO353_17560 0.11 -1.0 3,871,682 - AO353_17560 0.11 +1.5 3,871,682 - AO353_17560 0.11 -2.4 3,871,682 - AO353_17560 0.11 -1.0 3,871,738 + AO353_17560 0.19 -3.2 3,871,903 + AO353_17560 0.42 +0.4 3,871,903 + AO353_17560 0.42 -2.9 3,871,903 + AO353_17560 0.42 -1.6 3,871,903 + AO353_17560 0.42 +0.5 3,871,903 + AO353_17560 0.42 +1.2 3,871,903 + AO353_17560 0.42 -0.0 3,871,903 + AO353_17560 0.42 -2.0 3,871,903 + AO353_17560 0.42 +1.4 3,871,903 + AO353_17560 0.42 -2.6 3,871,903 + AO353_17560 0.42 +1.5 3,871,903 + AO353_17560 0.42 -3.0 3,871,903 + AO353_17560 0.42 -0.0 3,871,903 + AO353_17560 0.42 -1.0 3,871,904 - AO353_17560 0.43 +0.7 3,871,904 - AO353_17560 0.43 -1.0 3,871,904 - AO353_17560 0.43 +0.7 3,871,904 - AO353_17560 0.43 +1.4 3,871,904 - AO353_17560 0.43 -1.6 3,871,904 - AO353_17560 0.43 -1.6 3,871,904 - AO353_17560 0.43 +1.3 3,871,904 - AO353_17560 0.43 -2.0 3,871,904 - AO353_17560 0.43 -1.0 3,871,904 - AO353_17560 0.43 +1.0 3,871,904 - AO353_17560 0.43 -0.0 3,871,904 - AO353_17560 0.43 -1.0 3,871,904 - AO353_17560 0.43 +2.0 3,871,904 - AO353_17560 0.43 -1.6 3,871,905 + AO353_17560 0.43 -2.4 3,871,905 + AO353_17560 0.43 -1.6 3,871,906 - AO353_17560 0.43 -0.0 3,871,906 - AO353_17560 0.43 -2.0 3,871,906 - AO353_17560 0.43 -0.0 3,871,906 - AO353_17560 0.43 +1.8 3,871,906 - AO353_17560 0.43 -0.9 3,871,952 - AO353_17560 0.49 -1.6 3,872,056 - AO353_17560 0.65 -1.4 3,872,248 + -1.6 3,872,248 + -2.0 3,872,248 + -0.6 3,872,248 + -1.0 3,872,249 - +2.8 3,872,249 - +3.3 3,872,249 - -0.0 3,872,249 - +1.5 3,872,414 + -1.0 3,872,414 + +2.8 3,872,414 + -1.0 3,872,414 + -2.0 3,872,414 + +1.6 3,872,414 + +1.8 3,872,414 + +0.5 3,872,414 + -0.0 3,872,414 + -2.6 3,872,414 + -2.4 3,872,414 + -0.6 3,872,415 - -1.6 3,872,415 - +2.4 3,872,415 - -0.8 3,872,415 - -2.0 3,872,415 - -0.0 3,872,415 - -2.9 3,872,415 - -1.6 3,872,415 - -1.6 3,872,415 - -0.6 3,872,415 - +1.4 3,872,415 - +1.3 3,872,415 - -2.4 3,872,415 - -0.3 3,872,415 - -1.0 3,872,422 - -1.0 3,872,422 - -0.0 3,872,422 - +1.3 3,872,430 + +3.3 3,872,504 - +1.1 3,872,504 - -2.6 3,872,847 + AO353_17565 0.36 +2.5 3,872,847 + AO353_17565 0.36 -2.4 3,872,847 + AO353_17565 0.36 +3.7 3,872,848 - AO353_17565 0.36 -1.0 3,872,848 - AO353_17565 0.36 -1.0 3,872,848 - AO353_17565 0.36 -0.0 3,872,848 - AO353_17565 0.36 +2.0 3,872,848 - AO353_17565 0.36 +2.0 3,873,025 + -0.0 3,873,025 + AO353_17565 0.53 -2.4 3,873,025 + AO353_17565 0.53 -2.0 3,873,025 + AO353_17565 0.53 -0.0 3,873,025 + AO353_17565 0.53 -1.4 3,873,025 + AO353_17565 0.53 -2.6 3,873,026 - AO353_17565 0.53 -0.0 3,873,026 - AO353_17565 0.53 -1.6 3,873,026 - AO353_17565 0.53 -0.0 3,873,026 - AO353_17565 0.53 -1.0 3,873,026 - AO353_17565 0.53 -1.4 3,873,026 - AO353_17565 0.53 -0.0 3,873,026 - AO353_17565 0.53 +0.5 3,873,026 - AO353_17565 0.53 -0.0
Or see this region's nucleotide sequence