Experiment: Cisplatin 0.006 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_16910 and AO353_16915 are separated by 66 nucleotides AO353_16915 and AO353_16920 are separated by 17 nucleotides
AO353_16910: AO353_16910 - DNA polymerase IV, at 3,741,861 to 3,742,922
_16910
AO353_16915: AO353_16915 - hypothetical protein, at 3,742,989 to 3,743,942
_16915
AO353_16920: AO353_16920 - proline--tRNA ligase, at 3,743,960 to 3,745,675
_16920
Position (kb)
3742
3743
3744 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3742.002 kb on + strand, within AO353_16910 at 3742.002 kb on + strand, within AO353_16910 at 3742.002 kb on + strand, within AO353_16910 at 3742.002 kb on + strand, within AO353_16910 at 3742.002 kb on + strand, within AO353_16910 at 3742.002 kb on + strand, within AO353_16910 at 3742.002 kb on + strand, within AO353_16910 at 3742.002 kb on + strand, within AO353_16910 at 3742.003 kb on - strand, within AO353_16910 at 3742.003 kb on - strand, within AO353_16910 at 3742.003 kb on - strand, within AO353_16910 at 3742.003 kb on - strand, within AO353_16910 at 3742.003 kb on - strand, within AO353_16910 at 3742.003 kb on - strand, within AO353_16910 at 3742.003 kb on - strand, within AO353_16910 at 3742.018 kb on - strand, within AO353_16910 at 3742.101 kb on + strand, within AO353_16910 at 3742.101 kb on + strand, within AO353_16910 at 3742.101 kb on + strand, within AO353_16910 at 3742.102 kb on - strand, within AO353_16910 at 3742.102 kb on - strand, within AO353_16910 at 3742.102 kb on - strand, within AO353_16910 at 3742.102 kb on - strand, within AO353_16910 at 3742.102 kb on - strand, within AO353_16910 at 3742.103 kb on + strand, within AO353_16910 at 3742.104 kb on - strand, within AO353_16910 at 3742.104 kb on - strand, within AO353_16910 at 3742.104 kb on - strand, within AO353_16910 at 3742.143 kb on + strand, within AO353_16910 at 3742.144 kb on - strand, within AO353_16910 at 3742.182 kb on + strand, within AO353_16910 at 3742.182 kb on + strand, within AO353_16910 at 3742.267 kb on + strand, within AO353_16910 at 3742.267 kb on + strand, within AO353_16910 at 3742.267 kb on + strand, within AO353_16910 at 3742.267 kb on + strand, within AO353_16910 at 3742.267 kb on + strand, within AO353_16910 at 3742.267 kb on + strand, within AO353_16910 at 3742.267 kb on + strand, within AO353_16910 at 3742.267 kb on + strand, within AO353_16910 at 3742.267 kb on + strand, within AO353_16910 at 3742.267 kb on + strand, within AO353_16910 at 3742.267 kb on + strand, within AO353_16910 at 3742.267 kb on + strand, within AO353_16910 at 3742.267 kb on + strand, within AO353_16910 at 3742.267 kb on + strand, within AO353_16910 at 3742.267 kb on + strand, within AO353_16910 at 3742.267 kb on + strand, within AO353_16910 at 3742.267 kb on + strand, within AO353_16910 at 3742.268 kb on - strand, within AO353_16910 at 3742.268 kb on - strand, within AO353_16910 at 3742.268 kb on - strand, within AO353_16910 at 3742.272 kb on - strand, within AO353_16910 at 3742.272 kb on - strand, within AO353_16910 at 3742.272 kb on - strand, within AO353_16910 at 3742.272 kb on - strand, within AO353_16910 at 3742.272 kb on - strand, within AO353_16910 at 3742.272 kb on - strand, within AO353_16910 at 3742.272 kb on - strand, within AO353_16910 at 3742.272 kb on - strand, within AO353_16910 at 3742.272 kb on - strand, within AO353_16910 at 3742.272 kb on - strand, within AO353_16910 at 3742.272 kb on - strand, within AO353_16910 at 3742.272 kb on - strand, within AO353_16910 at 3742.272 kb on - strand, within AO353_16910 at 3742.272 kb on - strand, within AO353_16910 at 3742.272 kb on - strand, within AO353_16910 at 3742.291 kb on + strand, within AO353_16910 at 3742.292 kb on - strand, within AO353_16910 at 3742.455 kb on - strand, within AO353_16910 at 3742.607 kb on + strand, within AO353_16910 at 3742.607 kb on + strand, within AO353_16910 at 3742.607 kb on + strand, within AO353_16910 at 3742.608 kb on - strand, within AO353_16910 at 3742.608 kb on - strand, within AO353_16910 at 3742.608 kb on - strand, within AO353_16910 at 3742.611 kb on + strand, within AO353_16910 at 3742.611 kb on + strand, within AO353_16910 at 3742.611 kb on + strand, within AO353_16910 at 3742.611 kb on + strand, within AO353_16910 at 3742.611 kb on + strand, within AO353_16910 at 3742.611 kb on + strand, within AO353_16910 at 3742.612 kb on - strand, within AO353_16910 at 3742.612 kb on - strand, within AO353_16910 at 3742.612 kb on - strand, within AO353_16910 at 3742.612 kb on - strand, within AO353_16910 at 3742.637 kb on + strand, within AO353_16910 at 3742.637 kb on + strand, within AO353_16910 at 3742.637 kb on + strand, within AO353_16910 at 3742.637 kb on + strand, within AO353_16910 at 3742.637 kb on + strand, within AO353_16910 at 3742.638 kb on - strand, within AO353_16910 at 3742.638 kb on - strand, within AO353_16910 at 3742.638 kb on - strand at 3742.638 kb on - strand, within AO353_16910 at 3742.638 kb on - strand, within AO353_16910 at 3742.638 kb on - strand, within AO353_16910 at 3742.638 kb on - strand, within AO353_16910 at 3742.650 kb on - strand, within AO353_16910 at 3742.655 kb on - strand, within AO353_16910 at 3742.655 kb on - strand, within AO353_16910 at 3742.751 kb on + strand, within AO353_16910 at 3742.796 kb on + strand, within AO353_16910 at 3742.796 kb on + strand, within AO353_16910 at 3742.796 kb on + strand, within AO353_16910 at 3742.796 kb on + strand, within AO353_16910 at 3742.797 kb on - strand, within AO353_16910 at 3742.797 kb on - strand, within AO353_16910 at 3742.797 kb on - strand, within AO353_16910 at 3742.800 kb on + strand, within AO353_16910 at 3742.800 kb on + strand, within AO353_16910 at 3742.800 kb on + strand, within AO353_16910 at 3742.800 kb on + strand, within AO353_16910 at 3742.801 kb on - strand, within AO353_16910 at 3742.801 kb on - strand, within AO353_16910 at 3742.983 kb on + strand at 3742.983 kb on + strand at 3742.983 kb on + strand at 3742.983 kb on + strand at 3742.984 kb on - strand at 3742.984 kb on - strand at 3742.984 kb on - strand at 3742.990 kb on + strand at 3742.990 kb on + strand at 3742.990 kb on + strand at 3742.991 kb on - strand at 3743.154 kb on + strand, within AO353_16915 at 3743.191 kb on + strand, within AO353_16915 at 3743.191 kb on + strand, within AO353_16915 at 3743.191 kb on + strand, within AO353_16915 at 3743.201 kb on + strand, within AO353_16915 at 3743.201 kb on + strand, within AO353_16915 at 3743.201 kb on + strand, within AO353_16915 at 3743.201 kb on + strand, within AO353_16915 at 3743.202 kb on - strand, within AO353_16915 at 3743.202 kb on - strand, within AO353_16915 at 3743.202 kb on - strand, within AO353_16915 at 3743.202 kb on - strand, within AO353_16915 at 3743.202 kb on - strand, within AO353_16915 at 3743.202 kb on - strand, within AO353_16915 at 3743.202 kb on - strand at 3743.202 kb on - strand, within AO353_16915 at 3743.202 kb on - strand, within AO353_16915 at 3743.288 kb on + strand, within AO353_16915 at 3743.288 kb on + strand, within AO353_16915 at 3743.289 kb on - strand, within AO353_16915 at 3743.289 kb on - strand, within AO353_16915 at 3743.443 kb on + strand, within AO353_16915 at 3743.443 kb on + strand, within AO353_16915 at 3743.451 kb on - strand, within AO353_16915 at 3743.457 kb on - strand, within AO353_16915 at 3743.477 kb on + strand, within AO353_16915 at 3743.514 kb on + strand, within AO353_16915 at 3743.514 kb on + strand, within AO353_16915 at 3743.514 kb on + strand, within AO353_16915 at 3743.514 kb on + strand, within AO353_16915 at 3743.514 kb on + strand, within AO353_16915 at 3743.514 kb on + strand, within AO353_16915 at 3743.514 kb on + strand, within AO353_16915 at 3743.514 kb on + strand, within AO353_16915 at 3743.514 kb on + strand, within AO353_16915 at 3743.514 kb on + strand, within AO353_16915 at 3743.514 kb on + strand, within AO353_16915 at 3743.514 kb on + strand, within AO353_16915 at 3743.514 kb on + strand, within AO353_16915 at 3743.514 kb on + strand, within AO353_16915 at 3743.514 kb on + strand, within AO353_16915 at 3743.514 kb on + strand, within AO353_16915 at 3743.515 kb on - strand, within AO353_16915 at 3743.515 kb on - strand, within AO353_16915 at 3743.515 kb on - strand, within AO353_16915 at 3743.515 kb on - strand, within AO353_16915 at 3743.515 kb on - strand, within AO353_16915 at 3743.515 kb on - strand, within AO353_16915 at 3743.515 kb on - strand, within AO353_16915 at 3743.515 kb on - strand, within AO353_16915 at 3743.515 kb on - strand, within AO353_16915 at 3743.515 kb on - strand, within AO353_16915 at 3743.515 kb on - strand, within AO353_16915 at 3743.515 kb on - strand, within AO353_16915 at 3743.515 kb on - strand, within AO353_16915 at 3743.660 kb on - strand, within AO353_16915 at 3743.689 kb on + strand, within AO353_16915 at 3743.689 kb on + strand, within AO353_16915 at 3743.699 kb on - strand, within AO353_16915 at 3743.716 kb on + strand, within AO353_16915 at 3743.716 kb on + strand, within AO353_16915 at 3743.716 kb on + strand, within AO353_16915 at 3743.716 kb on + strand, within AO353_16915 at 3743.717 kb on - strand, within AO353_16915 at 3743.717 kb on - strand, within AO353_16915 at 3743.783 kb on + strand, within AO353_16915 at 3743.783 kb on + strand, within AO353_16915 at 3743.783 kb on + strand, within AO353_16915 at 3743.783 kb on + strand, within AO353_16915 at 3743.783 kb on + strand, within AO353_16915 at 3743.783 kb on + strand, within AO353_16915 at 3743.783 kb on + strand, within AO353_16915 at 3743.784 kb on - strand, within AO353_16915 at 3743.784 kb on - strand, within AO353_16915 at 3743.784 kb on - strand, within AO353_16915 at 3743.784 kb on - strand, within AO353_16915 at 3743.784 kb on - strand, within AO353_16915 at 3743.922 kb on + strand at 3743.923 kb on - strand at 3743.951 kb on + strand at 3743.951 kb on + strand at 3743.952 kb on - strand at 3743.972 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.006 mg/ml remove 3,742,002 + AO353_16910 0.13 -1.5 3,742,002 + AO353_16910 0.13 +1.9 3,742,002 + AO353_16910 0.13 +0.9 3,742,002 + AO353_16910 0.13 +1.7 3,742,002 + AO353_16910 0.13 -0.7 3,742,002 + AO353_16910 0.13 +1.1 3,742,002 + AO353_16910 0.13 -0.9 3,742,002 + AO353_16910 0.13 +0.2 3,742,003 - AO353_16910 0.13 -0.5 3,742,003 - AO353_16910 0.13 +2.4 3,742,003 - AO353_16910 0.13 -1.5 3,742,003 - AO353_16910 0.13 +1.1 3,742,003 - AO353_16910 0.13 +0.1 3,742,003 - AO353_16910 0.13 -0.9 3,742,003 - AO353_16910 0.13 +0.2 3,742,018 - AO353_16910 0.15 -1.9 3,742,101 + AO353_16910 0.23 -2.7 3,742,101 + AO353_16910 0.23 -0.9 3,742,101 + AO353_16910 0.23 -0.9 3,742,102 - AO353_16910 0.23 -1.9 3,742,102 - AO353_16910 0.23 +0.4 3,742,102 - AO353_16910 0.23 -1.9 3,742,102 - AO353_16910 0.23 -0.9 3,742,102 - AO353_16910 0.23 -1.5 3,742,103 + AO353_16910 0.23 +0.8 3,742,104 - AO353_16910 0.23 -2.9 3,742,104 - AO353_16910 0.23 -0.9 3,742,104 - AO353_16910 0.23 +0.1 3,742,143 + AO353_16910 0.27 -1.9 3,742,144 - AO353_16910 0.27 -0.9 3,742,182 + AO353_16910 0.30 +0.7 3,742,182 + AO353_16910 0.30 -2.5 3,742,267 + AO353_16910 0.38 -0.9 3,742,267 + AO353_16910 0.38 -0.9 3,742,267 + AO353_16910 0.38 +2.3 3,742,267 + AO353_16910 0.38 -2.9 3,742,267 + AO353_16910 0.38 -2.2 3,742,267 + AO353_16910 0.38 -1.9 3,742,267 + AO353_16910 0.38 +0.1 3,742,267 + AO353_16910 0.38 +0.7 3,742,267 + AO353_16910 0.38 +3.2 3,742,267 + AO353_16910 0.38 +0.1 3,742,267 + AO353_16910 0.38 -0.9 3,742,267 + AO353_16910 0.38 -3.6 3,742,267 + AO353_16910 0.38 -1.9 3,742,267 + AO353_16910 0.38 -1.5 3,742,267 + AO353_16910 0.38 -0.7 3,742,267 + AO353_16910 0.38 -1.5 3,742,267 + AO353_16910 0.38 -0.9 3,742,268 - AO353_16910 0.38 +0.1 3,742,268 - AO353_16910 0.38 -2.5 3,742,268 - AO353_16910 0.38 -1.5 3,742,272 - AO353_16910 0.39 -1.9 3,742,272 - AO353_16910 0.39 +0.1 3,742,272 - AO353_16910 0.39 -2.2 3,742,272 - AO353_16910 0.39 -1.5 3,742,272 - AO353_16910 0.39 -1.9 3,742,272 - AO353_16910 0.39 +0.4 3,742,272 - AO353_16910 0.39 +0.1 3,742,272 - AO353_16910 0.39 +2.4 3,742,272 - AO353_16910 0.39 +2.7 3,742,272 - AO353_16910 0.39 +1.5 3,742,272 - AO353_16910 0.39 -1.9 3,742,272 - AO353_16910 0.39 +0.1 3,742,272 - AO353_16910 0.39 -2.9 3,742,272 - AO353_16910 0.39 -0.9 3,742,272 - AO353_16910 0.39 -1.1 3,742,291 + AO353_16910 0.40 -0.9 3,742,292 - AO353_16910 0.41 -1.5 3,742,455 - AO353_16910 0.56 -1.5 3,742,607 + AO353_16910 0.70 -1.9 3,742,607 + AO353_16910 0.70 -0.9 3,742,607 + AO353_16910 0.70 +0.1 3,742,608 - AO353_16910 0.70 -1.2 3,742,608 - AO353_16910 0.70 -0.9 3,742,608 - AO353_16910 0.70 -0.9 3,742,611 + AO353_16910 0.71 +0.1 3,742,611 + AO353_16910 0.71 -0.3 3,742,611 + AO353_16910 0.71 -0.5 3,742,611 + AO353_16910 0.71 -1.5 3,742,611 + AO353_16910 0.71 -2.2 3,742,611 + AO353_16910 0.71 -2.7 3,742,612 - AO353_16910 0.71 +1.1 3,742,612 - AO353_16910 0.71 +2.1 3,742,612 - AO353_16910 0.71 +0.7 3,742,612 - AO353_16910 0.71 +2.4 3,742,637 + AO353_16910 0.73 -1.9 3,742,637 + AO353_16910 0.73 -0.9 3,742,637 + AO353_16910 0.73 +2.5 3,742,637 + AO353_16910 0.73 -3.2 3,742,637 + AO353_16910 0.73 -2.7 3,742,638 - AO353_16910 0.73 -0.9 3,742,638 - AO353_16910 0.73 +0.1 3,742,638 - +0.5 3,742,638 - AO353_16910 0.73 -0.9 3,742,638 - AO353_16910 0.73 -1.9 3,742,638 - AO353_16910 0.73 +1.7 3,742,638 - AO353_16910 0.73 +0.1 3,742,650 - AO353_16910 0.74 +1.6 3,742,655 - AO353_16910 0.75 +1.6 3,742,655 - AO353_16910 0.75 -0.9 3,742,751 + AO353_16910 0.84 -1.5 3,742,796 + AO353_16910 0.88 +0.1 3,742,796 + AO353_16910 0.88 +0.1 3,742,796 + AO353_16910 0.88 +0.9 3,742,796 + AO353_16910 0.88 -2.7 3,742,797 - AO353_16910 0.88 +1.4 3,742,797 - AO353_16910 0.88 -0.9 3,742,797 - AO353_16910 0.88 -1.9 3,742,800 + AO353_16910 0.88 +0.1 3,742,800 + AO353_16910 0.88 -2.4 3,742,800 + AO353_16910 0.88 +2.4 3,742,800 + AO353_16910 0.88 +0.1 3,742,801 - AO353_16910 0.89 -3.2 3,742,801 - AO353_16910 0.89 -0.3 3,742,983 + +1.0 3,742,983 + +0.4 3,742,983 + -1.5 3,742,983 + +2.3 3,742,984 - +0.3 3,742,984 - +2.7 3,742,984 - -0.9 3,742,990 + -1.9 3,742,990 + +2.1 3,742,990 + -1.5 3,742,991 - +1.9 3,743,154 + AO353_16915 0.17 -0.9 3,743,191 + AO353_16915 0.21 +0.1 3,743,191 + AO353_16915 0.21 -1.9 3,743,191 + AO353_16915 0.21 +0.1 3,743,201 + AO353_16915 0.22 -1.5 3,743,201 + AO353_16915 0.22 -0.7 3,743,201 + AO353_16915 0.22 -0.9 3,743,201 + AO353_16915 0.22 -1.5 3,743,202 - AO353_16915 0.22 -1.5 3,743,202 - AO353_16915 0.22 -2.7 3,743,202 - AO353_16915 0.22 -2.5 3,743,202 - AO353_16915 0.22 -0.9 3,743,202 - AO353_16915 0.22 +0.7 3,743,202 - AO353_16915 0.22 -0.9 3,743,202 - -0.9 3,743,202 - AO353_16915 0.22 -1.9 3,743,202 - AO353_16915 0.22 -2.2 3,743,288 + AO353_16915 0.31 +0.1 3,743,288 + AO353_16915 0.31 +0.5 3,743,289 - AO353_16915 0.31 -2.5 3,743,289 - AO353_16915 0.31 -0.5 3,743,443 + AO353_16915 0.48 -1.9 3,743,443 + AO353_16915 0.48 -0.9 3,743,451 - AO353_16915 0.48 -1.9 3,743,457 - AO353_16915 0.49 -0.9 3,743,477 + AO353_16915 0.51 -2.5 3,743,514 + AO353_16915 0.55 +2.1 3,743,514 + AO353_16915 0.55 -1.9 3,743,514 + AO353_16915 0.55 -1.9 3,743,514 + AO353_16915 0.55 +0.1 3,743,514 + AO353_16915 0.55 -2.7 3,743,514 + AO353_16915 0.55 -1.2 3,743,514 + AO353_16915 0.55 -1.2 3,743,514 + AO353_16915 0.55 -0.9 3,743,514 + AO353_16915 0.55 -0.9 3,743,514 + AO353_16915 0.55 +0.1 3,743,514 + AO353_16915 0.55 -2.7 3,743,514 + AO353_16915 0.55 -0.9 3,743,514 + AO353_16915 0.55 -1.9 3,743,514 + AO353_16915 0.55 -1.5 3,743,514 + AO353_16915 0.55 -2.2 3,743,514 + AO353_16915 0.55 -2.9 3,743,515 - AO353_16915 0.55 -2.2 3,743,515 - AO353_16915 0.55 -1.5 3,743,515 - AO353_16915 0.55 +0.1 3,743,515 - AO353_16915 0.55 -1.5 3,743,515 - AO353_16915 0.55 +0.1 3,743,515 - AO353_16915 0.55 +0.1 3,743,515 - AO353_16915 0.55 -1.5 3,743,515 - AO353_16915 0.55 -1.5 3,743,515 - AO353_16915 0.55 +0.1 3,743,515 - AO353_16915 0.55 -2.2 3,743,515 - AO353_16915 0.55 -0.9 3,743,515 - AO353_16915 0.55 -1.5 3,743,515 - AO353_16915 0.55 -1.5 3,743,660 - AO353_16915 0.70 -1.9 3,743,689 + AO353_16915 0.73 -1.5 3,743,689 + AO353_16915 0.73 -0.9 3,743,699 - AO353_16915 0.74 -0.2 3,743,716 + AO353_16915 0.76 -0.9 3,743,716 + AO353_16915 0.76 -0.9 3,743,716 + AO353_16915 0.76 -0.9 3,743,716 + AO353_16915 0.76 -0.9 3,743,717 - AO353_16915 0.76 -2.2 3,743,717 - AO353_16915 0.76 -2.2 3,743,783 + AO353_16915 0.83 -0.9 3,743,783 + AO353_16915 0.83 +0.1 3,743,783 + AO353_16915 0.83 -2.2 3,743,783 + AO353_16915 0.83 -2.2 3,743,783 + AO353_16915 0.83 -1.5 3,743,783 + AO353_16915 0.83 +0.1 3,743,783 + AO353_16915 0.83 -1.5 3,743,784 - AO353_16915 0.83 -2.9 3,743,784 - AO353_16915 0.83 -2.7 3,743,784 - AO353_16915 0.83 -0.9 3,743,784 - AO353_16915 0.83 -1.9 3,743,784 - AO353_16915 0.83 -2.5 3,743,922 + -2.2 3,743,923 - -0.7 3,743,951 + -1.5 3,743,951 + +0.1 3,743,952 - -0.2 3,743,972 - -2.5
Or see this region's nucleotide sequence