Experiment: Cisplatin 0.006 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_16805 and AO353_16810 are separated by 8 nucleotides AO353_16810 and AO353_16815 are separated by 42 nucleotides
AO353_16805: AO353_16805 - recombinase RecA, at 3,721,577 to 3,722,629
_16805
AO353_16810: AO353_16810 - recombinase RecX, at 3,722,638 to 3,723,105
_16810
AO353_16815: AO353_16815 - cytochrome D ubiquinol oxidase subunit II, at 3,723,148 to 3,724,269
_16815
Position (kb)
3722
3723
3724 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 3721.658 kb on - strand at 3721.658 kb on - strand at 3721.767 kb on - strand, within AO353_16805 at 3721.880 kb on + strand, within AO353_16805 at 3721.880 kb on + strand, within AO353_16805 at 3721.880 kb on + strand, within AO353_16805 at 3721.880 kb on + strand, within AO353_16805 at 3721.881 kb on - strand, within AO353_16805 at 3721.881 kb on - strand, within AO353_16805 at 3721.881 kb on - strand, within AO353_16805 at 3721.881 kb on - strand, within AO353_16805 at 3722.102 kb on - strand, within AO353_16805 at 3722.225 kb on + strand, within AO353_16805 at 3722.226 kb on - strand, within AO353_16805 at 3722.226 kb on - strand, within AO353_16805 at 3722.379 kb on - strand, within AO353_16805 at 3722.379 kb on - strand, within AO353_16805 at 3722.444 kb on + strand, within AO353_16805 at 3722.444 kb on + strand, within AO353_16805 at 3722.444 kb on + strand, within AO353_16805 at 3722.444 kb on + strand, within AO353_16805 at 3722.444 kb on + strand, within AO353_16805 at 3722.445 kb on - strand, within AO353_16805 at 3722.445 kb on - strand, within AO353_16805 at 3722.445 kb on - strand, within AO353_16805 at 3722.445 kb on - strand, within AO353_16805 at 3722.450 kb on + strand, within AO353_16805 at 3722.450 kb on + strand, within AO353_16805 at 3722.450 kb on + strand, within AO353_16805 at 3722.450 kb on + strand, within AO353_16805 at 3722.451 kb on - strand at 3722.451 kb on - strand, within AO353_16805 at 3722.623 kb on + strand at 3722.623 kb on + strand at 3722.623 kb on + strand at 3722.624 kb on - strand at 3722.648 kb on + strand at 3722.730 kb on + strand, within AO353_16810 at 3722.730 kb on + strand, within AO353_16810 at 3722.730 kb on + strand, within AO353_16810 at 3722.769 kb on + strand, within AO353_16810 at 3722.996 kb on + strand, within AO353_16810 at 3722.996 kb on + strand, within AO353_16810 at 3722.996 kb on + strand, within AO353_16810 at 3723.052 kb on + strand, within AO353_16810 at 3723.122 kb on - strand at 3723.130 kb on - strand at 3723.130 kb on - strand at 3723.130 kb on - strand at 3723.130 kb on - strand at 3723.130 kb on - strand at 3723.153 kb on + strand at 3723.153 kb on + strand at 3723.153 kb on + strand at 3723.153 kb on + strand at 3723.154 kb on - strand at 3723.154 kb on - strand at 3723.154 kb on - strand at 3723.230 kb on + strand at 3723.230 kb on + strand at 3723.230 kb on + strand at 3723.230 kb on + strand at 3723.230 kb on + strand at 3723.231 kb on - strand at 3723.332 kb on + strand, within AO353_16815 at 3723.332 kb on + strand, within AO353_16815 at 3723.332 kb on + strand, within AO353_16815 at 3723.332 kb on + strand, within AO353_16815 at 3723.332 kb on + strand, within AO353_16815 at 3723.332 kb on + strand, within AO353_16815 at 3723.332 kb on + strand, within AO353_16815 at 3723.332 kb on + strand, within AO353_16815 at 3723.332 kb on + strand, within AO353_16815 at 3723.332 kb on + strand, within AO353_16815 at 3723.333 kb on - strand, within AO353_16815 at 3723.333 kb on - strand, within AO353_16815 at 3723.333 kb on - strand, within AO353_16815 at 3723.333 kb on - strand, within AO353_16815 at 3723.333 kb on - strand, within AO353_16815 at 3723.333 kb on - strand, within AO353_16815 at 3723.333 kb on - strand, within AO353_16815 at 3723.333 kb on - strand, within AO353_16815 at 3723.333 kb on - strand, within AO353_16815 at 3723.333 kb on - strand, within AO353_16815 at 3723.333 kb on - strand, within AO353_16815 at 3723.333 kb on - strand, within AO353_16815 at 3723.333 kb on - strand, within AO353_16815 at 3723.333 kb on - strand, within AO353_16815 at 3723.333 kb on - strand, within AO353_16815 at 3723.336 kb on + strand, within AO353_16815 at 3723.336 kb on + strand, within AO353_16815 at 3723.336 kb on + strand, within AO353_16815 at 3723.336 kb on + strand, within AO353_16815 at 3723.336 kb on + strand, within AO353_16815 at 3723.336 kb on + strand, within AO353_16815 at 3723.336 kb on + strand, within AO353_16815 at 3723.336 kb on + strand, within AO353_16815 at 3723.336 kb on + strand, within AO353_16815 at 3723.336 kb on + strand, within AO353_16815 at 3723.336 kb on + strand, within AO353_16815 at 3723.337 kb on - strand, within AO353_16815 at 3723.337 kb on - strand, within AO353_16815 at 3723.337 kb on - strand, within AO353_16815 at 3723.337 kb on - strand, within AO353_16815 at 3723.337 kb on - strand, within AO353_16815 at 3723.337 kb on - strand, within AO353_16815 at 3723.337 kb on - strand, within AO353_16815 at 3723.337 kb on - strand, within AO353_16815 at 3723.337 kb on - strand, within AO353_16815 at 3723.337 kb on - strand, within AO353_16815 at 3723.337 kb on - strand, within AO353_16815 at 3723.337 kb on - strand, within AO353_16815 at 3723.337 kb on - strand, within AO353_16815 at 3723.337 kb on - strand, within AO353_16815 at 3723.337 kb on - strand, within AO353_16815 at 3723.337 kb on - strand, within AO353_16815 at 3723.337 kb on - strand, within AO353_16815 at 3723.337 kb on - strand, within AO353_16815 at 3723.337 kb on - strand, within AO353_16815 at 3723.337 kb on - strand, within AO353_16815 at 3723.337 kb on - strand, within AO353_16815 at 3723.337 kb on - strand, within AO353_16815 at 3723.337 kb on - strand, within AO353_16815 at 3723.385 kb on + strand, within AO353_16815 at 3723.385 kb on + strand, within AO353_16815 at 3723.385 kb on + strand, within AO353_16815 at 3723.385 kb on + strand, within AO353_16815 at 3723.385 kb on + strand, within AO353_16815 at 3723.385 kb on + strand, within AO353_16815 at 3723.385 kb on + strand, within AO353_16815 at 3723.385 kb on + strand, within AO353_16815 at 3723.385 kb on + strand, within AO353_16815 at 3723.385 kb on + strand, within AO353_16815 at 3723.385 kb on + strand, within AO353_16815 at 3723.385 kb on + strand, within AO353_16815 at 3723.385 kb on + strand, within AO353_16815 at 3723.385 kb on + strand, within AO353_16815 at 3723.386 kb on - strand, within AO353_16815 at 3723.386 kb on - strand, within AO353_16815 at 3723.386 kb on - strand, within AO353_16815 at 3723.386 kb on - strand, within AO353_16815 at 3723.386 kb on - strand, within AO353_16815 at 3723.386 kb on - strand, within AO353_16815 at 3723.386 kb on - strand, within AO353_16815 at 3723.386 kb on - strand, within AO353_16815 at 3723.386 kb on - strand, within AO353_16815 at 3723.386 kb on - strand, within AO353_16815 at 3723.386 kb on - strand, within AO353_16815 at 3723.386 kb on - strand, within AO353_16815 at 3723.386 kb on - strand, within AO353_16815 at 3723.386 kb on - strand, within AO353_16815 at 3723.386 kb on - strand, within AO353_16815 at 3723.386 kb on - strand, within AO353_16815 at 3723.386 kb on - strand, within AO353_16815 at 3723.386 kb on - strand, within AO353_16815 at 3723.386 kb on - strand, within AO353_16815 at 3723.387 kb on + strand, within AO353_16815 at 3723.387 kb on + strand, within AO353_16815 at 3723.387 kb on + strand, within AO353_16815 at 3723.387 kb on + strand, within AO353_16815 at 3723.388 kb on - strand, within AO353_16815 at 3723.388 kb on - strand, within AO353_16815 at 3723.388 kb on - strand, within AO353_16815 at 3723.388 kb on - strand, within AO353_16815 at 3723.388 kb on - strand, within AO353_16815 at 3723.388 kb on - strand, within AO353_16815 at 3723.473 kb on + strand, within AO353_16815 at 3723.473 kb on + strand, within AO353_16815 at 3723.473 kb on + strand, within AO353_16815 at 3723.474 kb on - strand, within AO353_16815 at 3723.474 kb on - strand, within AO353_16815 at 3723.474 kb on - strand, within AO353_16815 at 3723.474 kb on - strand, within AO353_16815 at 3723.474 kb on - strand, within AO353_16815 at 3723.474 kb on - strand, within AO353_16815 at 3723.512 kb on + strand, within AO353_16815 at 3723.512 kb on + strand, within AO353_16815 at 3723.512 kb on + strand, within AO353_16815 at 3723.513 kb on - strand, within AO353_16815 at 3723.513 kb on - strand, within AO353_16815 at 3723.513 kb on - strand, within AO353_16815 at 3723.513 kb on - strand, within AO353_16815 at 3723.551 kb on + strand, within AO353_16815 at 3723.551 kb on + strand, within AO353_16815 at 3723.551 kb on + strand, within AO353_16815 at 3723.551 kb on + strand, within AO353_16815 at 3723.551 kb on + strand, within AO353_16815 at 3723.552 kb on - strand, within AO353_16815 at 3723.552 kb on - strand, within AO353_16815 at 3723.552 kb on - strand, within AO353_16815 at 3723.552 kb on - strand, within AO353_16815 at 3723.552 kb on - strand, within AO353_16815 at 3723.552 kb on - strand, within AO353_16815 at 3723.552 kb on - strand, within AO353_16815 at 3723.552 kb on - strand, within AO353_16815 at 3723.552 kb on - strand, within AO353_16815 at 3723.552 kb on - strand, within AO353_16815 at 3723.552 kb on - strand, within AO353_16815 at 3723.552 kb on - strand, within AO353_16815 at 3723.552 kb on - strand, within AO353_16815 at 3723.552 kb on - strand, within AO353_16815 at 3723.552 kb on - strand, within AO353_16815 at 3723.552 kb on - strand, within AO353_16815 at 3723.552 kb on - strand, within AO353_16815 at 3723.673 kb on + strand, within AO353_16815 at 3723.673 kb on + strand, within AO353_16815 at 3723.673 kb on + strand, within AO353_16815 at 3723.673 kb on + strand, within AO353_16815 at 3723.673 kb on + strand, within AO353_16815 at 3723.673 kb on + strand, within AO353_16815 at 3723.673 kb on + strand, within AO353_16815 at 3723.673 kb on + strand, within AO353_16815 at 3723.673 kb on + strand, within AO353_16815 at 3723.673 kb on + strand, within AO353_16815 at 3723.673 kb on + strand, within AO353_16815 at 3723.673 kb on + strand, within AO353_16815 at 3723.674 kb on - strand, within AO353_16815 at 3723.837 kb on + strand, within AO353_16815 at 3723.837 kb on + strand, within AO353_16815 at 3723.838 kb on - strand, within AO353_16815 at 3723.987 kb on + strand, within AO353_16815 at 3723.987 kb on + strand, within AO353_16815 at 3723.987 kb on + strand, within AO353_16815 at 3723.987 kb on + strand, within AO353_16815
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.006 mg/ml remove 3,721,658 - -2.2 3,721,658 - -1.9 3,721,767 - AO353_16805 0.18 +0.1 3,721,880 + AO353_16805 0.29 -1.5 3,721,880 + AO353_16805 0.29 -0.9 3,721,880 + AO353_16805 0.29 +0.1 3,721,880 + AO353_16805 0.29 -1.9 3,721,881 - AO353_16805 0.29 +0.1 3,721,881 - AO353_16805 0.29 +0.1 3,721,881 - AO353_16805 0.29 -0.9 3,721,881 - AO353_16805 0.29 +0.1 3,722,102 - AO353_16805 0.50 -0.9 3,722,225 + AO353_16805 0.62 -1.5 3,722,226 - AO353_16805 0.62 -2.2 3,722,226 - AO353_16805 0.62 +0.1 3,722,379 - AO353_16805 0.76 -1.5 3,722,379 - AO353_16805 0.76 -0.9 3,722,444 + AO353_16805 0.82 -0.9 3,722,444 + AO353_16805 0.82 -0.9 3,722,444 + AO353_16805 0.82 -1.5 3,722,444 + AO353_16805 0.82 -1.9 3,722,444 + AO353_16805 0.82 -0.3 3,722,445 - AO353_16805 0.82 -1.5 3,722,445 - AO353_16805 0.82 -1.5 3,722,445 - AO353_16805 0.82 -2.2 3,722,445 - AO353_16805 0.82 -0.9 3,722,450 + AO353_16805 0.83 -1.9 3,722,450 + AO353_16805 0.83 -3.1 3,722,450 + AO353_16805 0.83 -0.9 3,722,450 + AO353_16805 0.83 -1.9 3,722,451 - -0.9 3,722,451 - AO353_16805 0.83 -2.5 3,722,623 + -0.9 3,722,623 + +0.1 3,722,623 + -0.9 3,722,624 - -2.5 3,722,648 + +1.7 3,722,730 + AO353_16810 0.20 -3.2 3,722,730 + AO353_16810 0.20 -0.9 3,722,730 + AO353_16810 0.20 -1.5 3,722,769 + AO353_16810 0.28 -2.7 3,722,996 + AO353_16810 0.76 -3.6 3,722,996 + AO353_16810 0.76 -1.5 3,722,996 + AO353_16810 0.76 +0.1 3,723,052 + AO353_16810 0.88 -2.2 3,723,122 - +1.3 3,723,130 - +1.8 3,723,130 - -1.5 3,723,130 - +0.5 3,723,130 - -2.5 3,723,130 - +0.8 3,723,153 + -1.5 3,723,153 + -1.9 3,723,153 + -1.2 3,723,153 + +1.2 3,723,154 - -2.9 3,723,154 - -0.2 3,723,154 - -1.5 3,723,230 + -0.7 3,723,230 + -0.9 3,723,230 + -0.9 3,723,230 + +1.2 3,723,230 + -0.9 3,723,231 - -0.4 3,723,332 + AO353_16815 0.16 -1.9 3,723,332 + AO353_16815 0.16 -0.3 3,723,332 + AO353_16815 0.16 +0.6 3,723,332 + AO353_16815 0.16 -1.5 3,723,332 + AO353_16815 0.16 +0.1 3,723,332 + AO353_16815 0.16 -0.1 3,723,332 + AO353_16815 0.16 -1.5 3,723,332 + AO353_16815 0.16 -0.5 3,723,332 + AO353_16815 0.16 +0.9 3,723,332 + AO353_16815 0.16 -1.5 3,723,333 - AO353_16815 0.16 -1.9 3,723,333 - AO353_16815 0.16 +2.4 3,723,333 - AO353_16815 0.16 +1.4 3,723,333 - AO353_16815 0.16 -1.5 3,723,333 - AO353_16815 0.16 +0.1 3,723,333 - AO353_16815 0.16 -0.5 3,723,333 - AO353_16815 0.16 -0.9 3,723,333 - AO353_16815 0.16 -1.5 3,723,333 - AO353_16815 0.16 +1.4 3,723,333 - AO353_16815 0.16 -0.5 3,723,333 - AO353_16815 0.16 +0.1 3,723,333 - AO353_16815 0.16 +0.5 3,723,333 - AO353_16815 0.16 +1.5 3,723,333 - AO353_16815 0.16 +0.1 3,723,333 - AO353_16815 0.16 -1.9 3,723,336 + AO353_16815 0.17 +1.1 3,723,336 + AO353_16815 0.17 +0.4 3,723,336 + AO353_16815 0.17 -1.5 3,723,336 + AO353_16815 0.17 -1.5 3,723,336 + AO353_16815 0.17 +0.1 3,723,336 + AO353_16815 0.17 -1.9 3,723,336 + AO353_16815 0.17 -1.9 3,723,336 + AO353_16815 0.17 -0.7 3,723,336 + AO353_16815 0.17 -1.5 3,723,336 + AO353_16815 0.17 +2.7 3,723,336 + AO353_16815 0.17 -2.0 3,723,337 - AO353_16815 0.17 -1.5 3,723,337 - AO353_16815 0.17 +1.9 3,723,337 - AO353_16815 0.17 +2.1 3,723,337 - AO353_16815 0.17 -2.7 3,723,337 - AO353_16815 0.17 +3.2 3,723,337 - AO353_16815 0.17 +0.1 3,723,337 - AO353_16815 0.17 -0.9 3,723,337 - AO353_16815 0.17 +0.9 3,723,337 - AO353_16815 0.17 -1.5 3,723,337 - AO353_16815 0.17 -1.5 3,723,337 - AO353_16815 0.17 +0.1 3,723,337 - AO353_16815 0.17 +3.0 3,723,337 - AO353_16815 0.17 +0.7 3,723,337 - AO353_16815 0.17 -0.9 3,723,337 - AO353_16815 0.17 +1.7 3,723,337 - AO353_16815 0.17 +1.7 3,723,337 - AO353_16815 0.17 +0.3 3,723,337 - AO353_16815 0.17 +0.8 3,723,337 - AO353_16815 0.17 +0.1 3,723,337 - AO353_16815 0.17 +0.3 3,723,337 - AO353_16815 0.17 -0.9 3,723,337 - AO353_16815 0.17 +1.1 3,723,337 - AO353_16815 0.17 -0.9 3,723,385 + AO353_16815 0.21 -1.7 3,723,385 + AO353_16815 0.21 -1.9 3,723,385 + AO353_16815 0.21 +0.1 3,723,385 + AO353_16815 0.21 +0.1 3,723,385 + AO353_16815 0.21 +1.5 3,723,385 + AO353_16815 0.21 -0.9 3,723,385 + AO353_16815 0.21 +3.5 3,723,385 + AO353_16815 0.21 -2.2 3,723,385 + AO353_16815 0.21 -1.5 3,723,385 + AO353_16815 0.21 +0.1 3,723,385 + AO353_16815 0.21 +1.7 3,723,385 + AO353_16815 0.21 -1.5 3,723,385 + AO353_16815 0.21 -2.9 3,723,385 + AO353_16815 0.21 -0.9 3,723,386 - AO353_16815 0.21 -1.5 3,723,386 - AO353_16815 0.21 -2.2 3,723,386 - AO353_16815 0.21 +1.9 3,723,386 - AO353_16815 0.21 -2.5 3,723,386 - AO353_16815 0.21 +0.5 3,723,386 - AO353_16815 0.21 +2.7 3,723,386 - AO353_16815 0.21 +2.2 3,723,386 - AO353_16815 0.21 -0.9 3,723,386 - AO353_16815 0.21 +4.2 3,723,386 - AO353_16815 0.21 -2.7 3,723,386 - AO353_16815 0.21 +0.5 3,723,386 - AO353_16815 0.21 -2.5 3,723,386 - AO353_16815 0.21 +0.1 3,723,386 - AO353_16815 0.21 -2.7 3,723,386 - AO353_16815 0.21 -0.5 3,723,386 - AO353_16815 0.21 -1.5 3,723,386 - AO353_16815 0.21 -2.7 3,723,386 - AO353_16815 0.21 -2.5 3,723,386 - AO353_16815 0.21 +0.5 3,723,387 + AO353_16815 0.21 -2.5 3,723,387 + AO353_16815 0.21 +0.1 3,723,387 + AO353_16815 0.21 -1.5 3,723,387 + AO353_16815 0.21 +2.7 3,723,388 - AO353_16815 0.21 +0.1 3,723,388 - AO353_16815 0.21 -1.9 3,723,388 - AO353_16815 0.21 -1.9 3,723,388 - AO353_16815 0.21 +0.4 3,723,388 - AO353_16815 0.21 -0.9 3,723,388 - AO353_16815 0.21 -0.5 3,723,473 + AO353_16815 0.29 +0.1 3,723,473 + AO353_16815 0.29 -0.9 3,723,473 + AO353_16815 0.29 +2.2 3,723,474 - AO353_16815 0.29 -1.9 3,723,474 - AO353_16815 0.29 +0.1 3,723,474 - AO353_16815 0.29 +0.1 3,723,474 - AO353_16815 0.29 -2.2 3,723,474 - AO353_16815 0.29 -0.9 3,723,474 - AO353_16815 0.29 +0.9 3,723,512 + AO353_16815 0.32 -0.1 3,723,512 + AO353_16815 0.32 -1.5 3,723,512 + AO353_16815 0.32 -2.2 3,723,513 - AO353_16815 0.33 -0.8 3,723,513 - AO353_16815 0.33 -0.9 3,723,513 - AO353_16815 0.33 +2.9 3,723,513 - AO353_16815 0.33 +0.1 3,723,551 + AO353_16815 0.36 -0.3 3,723,551 + AO353_16815 0.36 +3.3 3,723,551 + AO353_16815 0.36 -1.9 3,723,551 + AO353_16815 0.36 +1.7 3,723,551 + AO353_16815 0.36 +0.1 3,723,552 - AO353_16815 0.36 -0.3 3,723,552 - AO353_16815 0.36 -0.4 3,723,552 - AO353_16815 0.36 +0.1 3,723,552 - AO353_16815 0.36 -0.9 3,723,552 - AO353_16815 0.36 +0.1 3,723,552 - AO353_16815 0.36 -0.1 3,723,552 - AO353_16815 0.36 +1.7 3,723,552 - AO353_16815 0.36 +2.7 3,723,552 - AO353_16815 0.36 +1.4 3,723,552 - AO353_16815 0.36 -1.9 3,723,552 - AO353_16815 0.36 -2.5 3,723,552 - AO353_16815 0.36 +0.4 3,723,552 - AO353_16815 0.36 +1.9 3,723,552 - AO353_16815 0.36 -2.2 3,723,552 - AO353_16815 0.36 +0.1 3,723,552 - AO353_16815 0.36 -3.1 3,723,552 - AO353_16815 0.36 -1.5 3,723,673 + AO353_16815 0.47 -1.3 3,723,673 + AO353_16815 0.47 -1.5 3,723,673 + AO353_16815 0.47 +0.7 3,723,673 + AO353_16815 0.47 -1.5 3,723,673 + AO353_16815 0.47 -0.4 3,723,673 + AO353_16815 0.47 +2.3 3,723,673 + AO353_16815 0.47 +0.1 3,723,673 + AO353_16815 0.47 -1.5 3,723,673 + AO353_16815 0.47 +2.0 3,723,673 + AO353_16815 0.47 -1.5 3,723,673 + AO353_16815 0.47 +1.8 3,723,673 + AO353_16815 0.47 -1.5 3,723,674 - AO353_16815 0.47 +1.3 3,723,837 + AO353_16815 0.61 +2.8 3,723,837 + AO353_16815 0.61 +0.7 3,723,838 - AO353_16815 0.61 +0.8 3,723,987 + AO353_16815 0.75 -1.9 3,723,987 + AO353_16815 0.75 -1.5 3,723,987 + AO353_16815 0.75 -0.5 3,723,987 + AO353_16815 0.75 -1.7
Or see this region's nucleotide sequence