Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_16035

Experiment: Cisplatin 0.006 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO353_16025 and AO353_16030 are separated by 2 nucleotidesAO353_16030 and AO353_16035 are separated by 202 nucleotidesAO353_16035 and AO353_16040 are separated by 651 nucleotides AO353_16025: AO353_16025 - hypothetical protein, at 3,541,791 to 3,542,426 _16025 AO353_16030: AO353_16030 - peptidase inhibitor I42, at 3,542,429 to 3,542,821 _16030 AO353_16035: AO353_16035 - Lon protease, at 3,543,024 to 3,545,444 _16035 AO353_16040: AO353_16040 - hypothetical protein, at 3,546,096 to 3,546,467 _16040 Position (kb) 3543 3544 3545 3546Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 3542.030 kb on - strand, within AO353_16025at 3542.114 kb on + strand, within AO353_16025at 3542.114 kb on + strand, within AO353_16025at 3542.115 kb on - strand, within AO353_16025at 3542.152 kb on + strand, within AO353_16025at 3542.152 kb on + strand, within AO353_16025at 3542.152 kb on + strand, within AO353_16025at 3542.153 kb on - strand, within AO353_16025at 3542.153 kb on - strand, within AO353_16025at 3542.164 kb on + strand, within AO353_16025at 3542.164 kb on + strand, within AO353_16025at 3542.164 kb on + strand, within AO353_16025at 3542.165 kb on - strand, within AO353_16025at 3542.380 kb on + strandat 3542.380 kb on + strandat 3542.496 kb on + strand, within AO353_16030at 3542.496 kb on + strand, within AO353_16030at 3542.496 kb on + strand, within AO353_16030at 3542.496 kb on + strand, within AO353_16030at 3542.496 kb on + strand, within AO353_16030at 3542.497 kb on - strand, within AO353_16030at 3542.497 kb on - strand, within AO353_16030at 3542.497 kb on - strand, within AO353_16030at 3542.497 kb on - strand, within AO353_16030at 3542.497 kb on - strand, within AO353_16030at 3542.497 kb on - strand, within AO353_16030at 3542.595 kb on + strand, within AO353_16030at 3542.596 kb on - strand, within AO353_16030at 3542.974 kb on + strandat 3542.974 kb on + strandat 3542.975 kb on - strandat 3542.975 kb on - strandat 3543.005 kb on + strandat 3543.005 kb on + strandat 3543.005 kb on + strandat 3543.014 kb on + strandat 3543.014 kb on + strandat 3543.014 kb on + strandat 3543.015 kb on - strandat 3543.015 kb on - strandat 3543.074 kb on + strandat 3543.075 kb on - strandat 3543.092 kb on - strandat 3543.092 kb on - strandat 3543.122 kb on + strandat 3543.123 kb on - strandat 3543.123 kb on - strandat 3543.294 kb on + strand, within AO353_16035at 3543.336 kb on + strand, within AO353_16035at 3543.336 kb on + strand, within AO353_16035at 3543.337 kb on - strand, within AO353_16035at 3543.337 kb on - strand, within AO353_16035at 3543.337 kb on - strand, within AO353_16035at 3543.337 kb on - strand, within AO353_16035at 3543.337 kb on - strand, within AO353_16035at 3543.409 kb on + strand, within AO353_16035at 3543.409 kb on + strand, within AO353_16035at 3543.409 kb on + strand, within AO353_16035at 3543.409 kb on + strand, within AO353_16035at 3543.409 kb on + strand, within AO353_16035at 3543.409 kb on + strand, within AO353_16035at 3543.409 kb on + strand, within AO353_16035at 3543.410 kb on - strand, within AO353_16035at 3543.410 kb on - strand, within AO353_16035at 3543.410 kb on - strand, within AO353_16035at 3543.410 kb on - strand, within AO353_16035at 3543.410 kb on - strand, within AO353_16035at 3543.410 kb on - strand, within AO353_16035at 3543.410 kb on - strand, within AO353_16035at 3543.410 kb on - strand, within AO353_16035at 3543.410 kb on - strand, within AO353_16035at 3543.416 kb on - strand, within AO353_16035at 3543.711 kb on + strand, within AO353_16035at 3543.731 kb on - strand, within AO353_16035at 3543.856 kb on + strand, within AO353_16035at 3543.856 kb on + strand, within AO353_16035at 3543.856 kb on + strand, within AO353_16035at 3543.856 kb on + strand, within AO353_16035at 3543.970 kb on + strand, within AO353_16035at 3543.970 kb on + strand, within AO353_16035at 3543.971 kb on - strand, within AO353_16035at 3544.145 kb on - strand, within AO353_16035at 3544.145 kb on - strand, within AO353_16035at 3544.145 kb on - strand, within AO353_16035at 3544.145 kb on - strand, within AO353_16035at 3544.145 kb on - strand, within AO353_16035at 3544.145 kb on - strand, within AO353_16035at 3544.145 kb on - strand, within AO353_16035at 3544.145 kb on - strand, within AO353_16035at 3544.145 kb on - strand, within AO353_16035at 3544.204 kb on + strand, within AO353_16035at 3544.204 kb on + strand, within AO353_16035at 3544.205 kb on - strand, within AO353_16035at 3544.309 kb on + strand, within AO353_16035at 3544.309 kb on + strand, within AO353_16035at 3544.309 kb on + strand, within AO353_16035at 3544.420 kb on + strand, within AO353_16035at 3544.456 kb on + strand, within AO353_16035at 3544.456 kb on + strand, within AO353_16035at 3544.457 kb on - strand, within AO353_16035at 3544.474 kb on + strand, within AO353_16035at 3544.882 kb on + strand, within AO353_16035at 3544.882 kb on + strand, within AO353_16035at 3544.882 kb on + strand, within AO353_16035at 3544.882 kb on + strand, within AO353_16035at 3544.883 kb on - strand, within AO353_16035at 3544.883 kb on - strand, within AO353_16035at 3544.903 kb on + strand, within AO353_16035at 3544.903 kb on + strand, within AO353_16035at 3544.904 kb on - strand, within AO353_16035at 3544.904 kb on - strand, within AO353_16035at 3545.017 kb on + strand, within AO353_16035at 3545.017 kb on + strand, within AO353_16035at 3545.018 kb on - strand, within AO353_16035at 3545.018 kb on - strand, within AO353_16035at 3545.055 kb on + strand, within AO353_16035at 3545.277 kb on + strandat 3545.277 kb on + strandat 3545.278 kb on - strandat 3545.278 kb on - strandat 3545.278 kb on - strandat 3545.278 kb on - strandat 3545.278 kb on - strandat 3545.320 kb on + strandat 3545.320 kb on + strandat 3545.320 kb on + strandat 3545.320 kb on + strandat 3545.321 kb on - strandat 3545.321 kb on - strandat 3545.321 kb on - strandat 3545.404 kb on + strandat 3545.405 kb on - strandat 3545.466 kb on - strandat 3545.474 kb on + strandat 3545.474 kb on + strandat 3545.474 kb on + strandat 3545.474 kb on + strandat 3545.474 kb on + strandat 3545.474 kb on + strandat 3545.474 kb on + strandat 3545.474 kb on + strandat 3545.474 kb on + strandat 3545.475 kb on - strandat 3545.475 kb on - strandat 3545.475 kb on - strandat 3545.531 kb on + strandat 3545.531 kb on + strandat 3545.531 kb on + strandat 3545.531 kb on + strandat 3545.531 kb on + strandat 3545.532 kb on - strandat 3545.532 kb on - strandat 3545.532 kb on - strandat 3545.532 kb on - strandat 3545.532 kb on - strandat 3545.538 kb on + strandat 3545.538 kb on + strandat 3545.538 kb on + strandat 3545.538 kb on + strandat 3545.538 kb on + strandat 3545.538 kb on + strandat 3545.539 kb on - strandat 3545.539 kb on - strandat 3545.539 kb on - strandat 3545.539 kb on - strandat 3545.539 kb on - strandat 3545.539 kb on - strandat 3545.539 kb on - strandat 3545.539 kb on - strandat 3545.539 kb on - strandat 3545.539 kb on - strandat 3545.539 kb on - strandat 3545.539 kb on - strandat 3545.539 kb on - strandat 3545.550 kb on + strandat 3545.550 kb on + strandat 3545.550 kb on + strandat 3545.550 kb on + strandat 3545.550 kb on + strandat 3545.550 kb on + strandat 3545.550 kb on + strandat 3545.550 kb on + strandat 3545.550 kb on + strandat 3545.550 kb on + strandat 3545.550 kb on + strandat 3545.551 kb on - strandat 3545.551 kb on - strandat 3545.551 kb on - strandat 3545.551 kb on - strandat 3545.551 kb on - strandat 3545.551 kb on - strandat 3545.551 kb on - strandat 3545.551 kb on - strandat 3545.551 kb on - strandat 3545.551 kb on - strandat 3545.551 kb on - strandat 3545.551 kb on - strandat 3545.555 kb on + strandat 3545.555 kb on + strandat 3545.555 kb on + strandat 3545.556 kb on - strandat 3545.556 kb on - strandat 3545.599 kb on + strandat 3545.599 kb on + strandat 3545.599 kb on + strandat 3545.599 kb on + strandat 3545.599 kb on + strandat 3545.599 kb on + strandat 3545.600 kb on - strandat 3545.600 kb on - strandat 3545.600 kb on - strandat 3545.614 kb on + strandat 3545.614 kb on + strandat 3545.614 kb on + strandat 3545.615 kb on - strandat 3545.615 kb on - strandat 3545.615 kb on - strandat 3545.615 kb on - strandat 3545.615 kb on - strandat 3545.615 kb on - strandat 3545.615 kb on - strandat 3545.686 kb on + strandat 3545.686 kb on + strandat 3545.687 kb on - strandat 3545.687 kb on - strandat 3545.687 kb on - strandat 3545.687 kb on - strandat 3545.687 kb on - strandat 3545.687 kb on - strandat 3545.687 kb on - strandat 3545.687 kb on - strandat 3545.687 kb on - strandat 3545.687 kb on - strandat 3545.687 kb on - strandat 3545.687 kb on - strandat 3545.687 kb on - strandat 3545.687 kb on - strandat 3545.687 kb on - strandat 3545.687 kb on - strandat 3545.687 kb on - strandat 3545.691 kb on - strandat 3545.691 kb on - strandat 3545.691 kb on - strandat 3545.691 kb on - strandat 3545.691 kb on - strandat 3545.691 kb on - strandat 3546.032 kb on + strandat 3546.032 kb on + strandat 3546.044 kb on + strandat 3546.044 kb on + strandat 3546.044 kb on + strandat 3546.045 kb on - strandat 3546.045 kb on - strandat 3546.045 kb on - strandat 3546.045 kb on - strandat 3546.045 kb on - strandat 3546.045 kb on - strandat 3546.045 kb on - strandat 3546.053 kb on + strandat 3546.054 kb on - strandat 3546.054 kb on - strandat 3546.054 kb on - strandat 3546.098 kb on - strandat 3546.361 kb on + strand, within AO353_16040at 3546.361 kb on + strand, within AO353_16040at 3546.362 kb on - strand, within AO353_16040at 3546.418 kb on + strand, within AO353_16040at 3546.418 kb on + strand, within AO353_16040at 3546.419 kb on - strand, within AO353_16040

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Per-strain Table

Position Strand Gene LocusTag Fraction Cisplatin 0.006 mg/ml
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3,542,030 - AO353_16025 0.38 -1.9
3,542,114 + AO353_16025 0.51 +3.4
3,542,114 + AO353_16025 0.51 -1.5
3,542,115 - AO353_16025 0.51 -0.9
3,542,152 + AO353_16025 0.57 +1.7
3,542,152 + AO353_16025 0.57 -1.9
3,542,152 + AO353_16025 0.57 -0.9
3,542,153 - AO353_16025 0.57 +2.5
3,542,153 - AO353_16025 0.57 -1.9
3,542,164 + AO353_16025 0.59 -1.9
3,542,164 + AO353_16025 0.59 +0.1
3,542,164 + AO353_16025 0.59 -2.9
3,542,165 - AO353_16025 0.59 -1.1
3,542,380 + -0.9
3,542,380 + +0.9
3,542,496 + AO353_16030 0.17 +1.1
3,542,496 + AO353_16030 0.17 +0.1
3,542,496 + AO353_16030 0.17 +3.3
3,542,496 + AO353_16030 0.17 -0.9
3,542,496 + AO353_16030 0.17 -0.9
3,542,497 - AO353_16030 0.17 -1.5
3,542,497 - AO353_16030 0.17 +0.7
3,542,497 - AO353_16030 0.17 -2.2
3,542,497 - AO353_16030 0.17 -0.9
3,542,497 - AO353_16030 0.17 -3.2
3,542,497 - AO353_16030 0.17 +0.1
3,542,595 + AO353_16030 0.42 -0.8
3,542,596 - AO353_16030 0.42 +0.8
3,542,974 + +0.3
3,542,974 + +1.0
3,542,975 - -1.9
3,542,975 - +1.1
3,543,005 + -0.9
3,543,005 + -2.5
3,543,005 + +1.9
3,543,014 + +0.9
3,543,014 + -1.5
3,543,014 + -0.9
3,543,015 - -0.9
3,543,015 - -0.9
3,543,074 + +1.4
3,543,075 - +0.5
3,543,092 - +0.1
3,543,092 - +0.1
3,543,122 + -1.5
3,543,123 - -1.5
3,543,123 - +0.1
3,543,294 + AO353_16035 0.11 -0.4
3,543,336 + AO353_16035 0.13 -3.2
3,543,336 + AO353_16035 0.13 +0.1
3,543,337 - AO353_16035 0.13 -0.3
3,543,337 - AO353_16035 0.13 -1.5
3,543,337 - AO353_16035 0.13 -2.7
3,543,337 - AO353_16035 0.13 +2.0
3,543,337 - AO353_16035 0.13 +1.7
3,543,409 + AO353_16035 0.16 -0.9
3,543,409 + AO353_16035 0.16 +1.9
3,543,409 + AO353_16035 0.16 -0.9
3,543,409 + AO353_16035 0.16 -2.9
3,543,409 + AO353_16035 0.16 +0.1
3,543,409 + AO353_16035 0.16 -1.5
3,543,409 + AO353_16035 0.16 -1.5
3,543,410 - AO353_16035 0.16 +1.1
3,543,410 - AO353_16035 0.16 +0.1
3,543,410 - AO353_16035 0.16 -1.5
3,543,410 - AO353_16035 0.16 -2.2
3,543,410 - AO353_16035 0.16 +0.1
3,543,410 - AO353_16035 0.16 -0.5
3,543,410 - AO353_16035 0.16 -2.2
3,543,410 - AO353_16035 0.16 -0.2
3,543,410 - AO353_16035 0.16 -2.7
3,543,416 - AO353_16035 0.16 -1.5
3,543,711 + AO353_16035 0.28 -2.5
3,543,731 - AO353_16035 0.29 -2.7
3,543,856 + AO353_16035 0.34 +1.7
3,543,856 + AO353_16035 0.34 -0.9
3,543,856 + AO353_16035 0.34 -3.1
3,543,856 + AO353_16035 0.34 +1.1
3,543,970 + AO353_16035 0.39 -1.5
3,543,970 + AO353_16035 0.39 -2.2
3,543,971 - AO353_16035 0.39 +0.1
3,544,145 - AO353_16035 0.46 +0.1
3,544,145 - AO353_16035 0.46 -0.9
3,544,145 - AO353_16035 0.46 -1.5
3,544,145 - AO353_16035 0.46 +0.1
3,544,145 - AO353_16035 0.46 -1.5
3,544,145 - AO353_16035 0.46 -1.2
3,544,145 - AO353_16035 0.46 -0.6
3,544,145 - AO353_16035 0.46 -2.5
3,544,145 - AO353_16035 0.46 -1.2
3,544,204 + AO353_16035 0.49 +0.1
3,544,204 + AO353_16035 0.49 -0.9
3,544,205 - AO353_16035 0.49 -2.2
3,544,309 + AO353_16035 0.53 -0.1
3,544,309 + AO353_16035 0.53 -1.5
3,544,309 + AO353_16035 0.53 -1.9
3,544,420 + AO353_16035 0.58 -1.5
3,544,456 + AO353_16035 0.59 -1.5
3,544,456 + AO353_16035 0.59 -1.9
3,544,457 - AO353_16035 0.59 +0.1
3,544,474 + AO353_16035 0.60 -2.7
3,544,882 + AO353_16035 0.77 -1.5
3,544,882 + AO353_16035 0.77 +0.5
3,544,882 + AO353_16035 0.77 -1.9
3,544,882 + AO353_16035 0.77 -0.9
3,544,883 - AO353_16035 0.77 +3.6
3,544,883 - AO353_16035 0.77 +0.1
3,544,903 + AO353_16035 0.78 -1.2
3,544,903 + AO353_16035 0.78 -2.9
3,544,904 - AO353_16035 0.78 +0.1
3,544,904 - AO353_16035 0.78 -0.9
3,545,017 + AO353_16035 0.82 -1.1
3,545,017 + AO353_16035 0.82 +0.8
3,545,018 - AO353_16035 0.82 +1.9
3,545,018 - AO353_16035 0.82 -1.9
3,545,055 + AO353_16035 0.84 -3.2
3,545,277 + -0.9
3,545,277 + -1.5
3,545,278 - +0.1
3,545,278 - -0.9
3,545,278 - -1.5
3,545,278 - -1.5
3,545,278 - +0.6
3,545,320 + +0.1
3,545,320 + -2.2
3,545,320 + +4.2
3,545,320 + -1.5
3,545,321 - -2.1
3,545,321 - -0.9
3,545,321 - -0.0
3,545,404 + +1.4
3,545,405 - -0.2
3,545,466 - +0.4
3,545,474 + +0.1
3,545,474 + -1.5
3,545,474 + +1.0
3,545,474 + +0.1
3,545,474 + -2.9
3,545,474 + +0.1
3,545,474 + -1.5
3,545,474 + -3.3
3,545,474 + -1.7
3,545,475 - +3.6
3,545,475 - -0.3
3,545,475 - +0.1
3,545,531 + -0.9
3,545,531 + -0.7
3,545,531 + -1.5
3,545,531 + -2.2
3,545,531 + -1.5
3,545,532 - +1.4
3,545,532 - -1.5
3,545,532 - -1.5
3,545,532 - +0.1
3,545,532 - +0.1
3,545,538 + -0.3
3,545,538 + +0.4
3,545,538 + +0.9
3,545,538 + -1.1
3,545,538 + -2.7
3,545,538 + -0.9
3,545,539 - -0.6
3,545,539 - -0.0
3,545,539 - -1.5
3,545,539 - -0.9
3,545,539 - -0.9
3,545,539 - +0.6
3,545,539 - -1.9
3,545,539 - +0.9
3,545,539 - -0.9
3,545,539 - +0.1
3,545,539 - -0.3
3,545,539 - +1.1
3,545,539 - +1.1
3,545,550 + -0.5
3,545,550 + -3.6
3,545,550 + -1.5
3,545,550 + -0.9
3,545,550 + -1.5
3,545,550 + +0.1
3,545,550 + -2.2
3,545,550 + -2.2
3,545,550 + -0.5
3,545,550 + -1.9
3,545,550 + +0.1
3,545,551 - -0.9
3,545,551 - +0.7
3,545,551 - +1.1
3,545,551 - -1.5
3,545,551 - +0.6
3,545,551 - -0.7
3,545,551 - +0.5
3,545,551 - -1.9
3,545,551 - +0.1
3,545,551 - -2.2
3,545,551 - +0.1
3,545,551 - +0.1
3,545,555 + -0.3
3,545,555 + -0.9
3,545,555 + -2.7
3,545,556 - +2.9
3,545,556 - -0.7
3,545,599 + +2.1
3,545,599 + -0.7
3,545,599 + +0.9
3,545,599 + +0.1
3,545,599 + -0.9
3,545,599 + -1.2
3,545,600 - -0.9
3,545,600 - +0.1
3,545,600 - +0.5
3,545,614 + +0.1
3,545,614 + +0.1
3,545,614 + -1.7
3,545,615 - -1.9
3,545,615 - +1.4
3,545,615 - -1.9
3,545,615 - -0.9
3,545,615 - -0.9
3,545,615 - -0.9
3,545,615 - +2.5
3,545,686 + +1.1
3,545,686 + -0.9
3,545,687 - +0.1
3,545,687 - -0.5
3,545,687 - -1.5
3,545,687 - +1.0
3,545,687 - +0.1
3,545,687 - -0.9
3,545,687 - -0.9
3,545,687 - +0.1
3,545,687 - -0.9
3,545,687 - -1.9
3,545,687 - +1.4
3,545,687 - -1.5
3,545,687 - -1.5
3,545,687 - -2.2
3,545,687 - -1.9
3,545,687 - +0.4
3,545,687 - +0.1
3,545,691 - +1.1
3,545,691 - +1.4
3,545,691 - -1.0
3,545,691 - +0.7
3,545,691 - -0.9
3,545,691 - -0.2
3,546,032 + -1.9
3,546,032 + -2.5
3,546,044 + -3.6
3,546,044 + +1.3
3,546,044 + +3.3
3,546,045 - -1.1
3,546,045 - -0.9
3,546,045 - +0.5
3,546,045 - -0.6
3,546,045 - -0.3
3,546,045 - -1.9
3,546,045 - -0.9
3,546,053 + -2.3
3,546,054 - -0.9
3,546,054 - +4.6
3,546,054 - +3.7
3,546,098 - +2.1
3,546,361 + AO353_16040 0.71 +0.1
3,546,361 + AO353_16040 0.71 +0.1
3,546,362 - AO353_16040 0.72 -0.9
3,546,418 + AO353_16040 0.87 -0.7
3,546,418 + AO353_16040 0.87 +1.7
3,546,419 - AO353_16040 0.87 -1.5

Or see this region's nucleotide sequence