Experiment: Cisplatin 0.006 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_15815 and AO353_15820 are separated by 146 nucleotides AO353_15820 and AO353_15825 are separated by 2 nucleotides AO353_15825 and AO353_15830 are separated by 189 nucleotides AO353_15830 and AO353_15835 are separated by 50 nucleotides
AO353_15815: AO353_15815 - inositol monophosphatase, at 3,494,081 to 3,494,899
_15815
AO353_15820: AO353_15820 - RNA methyltransferase, at 3,495,046 to 3,495,816
_15820
AO353_15825: AO353_15825 - serine acetyltransferase, at 3,495,819 to 3,496,595
_15825
AO353_15830: AO353_15830 - transcriptional regulator, at 3,496,785 to 3,497,276
_15830
AO353_15835: AO353_15835 - cysteine desulfurase IscS, at 3,497,327 to 3,498,541
_15835
Position (kb)
3495
3496
3497 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3494.941 kb on - strand at 3494.982 kb on + strand at 3494.982 kb on + strand at 3494.983 kb on - strand at 3494.983 kb on - strand at 3494.993 kb on + strand at 3495.006 kb on - strand at 3495.006 kb on - strand at 3495.020 kb on - strand at 3495.020 kb on - strand at 3495.020 kb on - strand at 3495.436 kb on + strand, within AO353_15820 at 3495.508 kb on + strand, within AO353_15820 at 3495.508 kb on + strand, within AO353_15820 at 3495.508 kb on + strand, within AO353_15820 at 3495.508 kb on + strand, within AO353_15820 at 3495.508 kb on + strand, within AO353_15820 at 3495.509 kb on - strand, within AO353_15820 at 3495.509 kb on - strand, within AO353_15820 at 3495.509 kb on - strand, within AO353_15820 at 3495.509 kb on - strand, within AO353_15820 at 3495.509 kb on - strand, within AO353_15820 at 3495.509 kb on - strand, within AO353_15820 at 3495.509 kb on - strand, within AO353_15820 at 3495.625 kb on + strand, within AO353_15820 at 3495.625 kb on + strand, within AO353_15820 at 3495.625 kb on + strand, within AO353_15820 at 3495.625 kb on + strand, within AO353_15820 at 3495.625 kb on + strand, within AO353_15820 at 3495.625 kb on + strand, within AO353_15820 at 3495.625 kb on + strand, within AO353_15820 at 3495.625 kb on + strand, within AO353_15820 at 3495.626 kb on - strand, within AO353_15820 at 3495.626 kb on - strand, within AO353_15820 at 3495.626 kb on - strand, within AO353_15820 at 3495.626 kb on - strand, within AO353_15820 at 3495.626 kb on - strand, within AO353_15820 at 3495.626 kb on - strand, within AO353_15820 at 3495.626 kb on - strand, within AO353_15820 at 3495.626 kb on - strand, within AO353_15820 at 3495.626 kb on - strand, within AO353_15820 at 3495.712 kb on + strand, within AO353_15820 at 3495.712 kb on + strand, within AO353_15820 at 3495.713 kb on - strand, within AO353_15820 at 3495.713 kb on - strand, within AO353_15820 at 3495.713 kb on - strand, within AO353_15820 at 3495.747 kb on + strand at 3495.747 kb on + strand at 3495.747 kb on + strand at 3495.748 kb on - strand at 3495.748 kb on - strand at 3495.801 kb on + strand at 3495.802 kb on - strand at 3495.802 kb on - strand at 3495.802 kb on - strand at 3495.802 kb on - strand at 3495.842 kb on + strand at 3495.842 kb on + strand at 3495.843 kb on - strand at 3495.878 kb on + strand at 3495.878 kb on + strand at 3495.878 kb on + strand at 3495.878 kb on + strand at 3495.878 kb on + strand at 3495.878 kb on + strand at 3495.878 kb on + strand at 3495.879 kb on - strand at 3495.879 kb on - strand at 3495.879 kb on - strand at 3496.055 kb on + strand, within AO353_15825 at 3496.056 kb on - strand, within AO353_15825 at 3496.056 kb on - strand, within AO353_15825 at 3496.119 kb on + strand, within AO353_15825 at 3496.120 kb on - strand, within AO353_15825 at 3496.189 kb on + strand, within AO353_15825 at 3496.190 kb on - strand, within AO353_15825 at 3496.190 kb on - strand, within AO353_15825 at 3496.390 kb on - strand, within AO353_15825 at 3496.515 kb on + strand, within AO353_15825 at 3496.516 kb on - strand, within AO353_15825 at 3496.593 kb on + strand at 3496.651 kb on + strand at 3496.651 kb on + strand at 3496.651 kb on + strand at 3496.651 kb on + strand at 3496.651 kb on + strand at 3496.651 kb on + strand at 3496.651 kb on + strand at 3496.651 kb on + strand at 3496.651 kb on + strand at 3496.651 kb on + strand at 3496.652 kb on - strand at 3496.652 kb on - strand at 3496.652 kb on - strand at 3496.668 kb on + strand at 3496.668 kb on + strand at 3496.668 kb on + strand at 3496.668 kb on + strand at 3496.668 kb on + strand at 3496.668 kb on + strand at 3496.669 kb on - strand at 3496.669 kb on - strand at 3496.669 kb on - strand at 3496.669 kb on - strand at 3496.670 kb on + strand at 3496.670 kb on + strand at 3496.670 kb on + strand at 3496.670 kb on + strand at 3496.671 kb on - strand at 3496.671 kb on - strand at 3496.671 kb on - strand at 3496.776 kb on + strand at 3496.776 kb on + strand at 3496.776 kb on + strand at 3496.796 kb on + strand at 3496.796 kb on + strand at 3496.905 kb on + strand, within AO353_15830 at 3496.905 kb on + strand, within AO353_15830 at 3496.905 kb on + strand, within AO353_15830 at 3496.905 kb on + strand, within AO353_15830 at 3497.032 kb on + strand, within AO353_15830
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.006 mg/ml remove 3,494,941 - -0.9 3,494,982 + -3.2 3,494,982 + +0.1 3,494,983 - -3.2 3,494,983 - +1.5 3,494,993 + -1.9 3,495,006 - -0.7 3,495,006 - -1.1 3,495,020 - -0.9 3,495,020 - -1.5 3,495,020 - -0.5 3,495,436 + AO353_15820 0.51 -0.0 3,495,508 + AO353_15820 0.60 +1.3 3,495,508 + AO353_15820 0.60 -0.9 3,495,508 + AO353_15820 0.60 -1.2 3,495,508 + AO353_15820 0.60 +1.7 3,495,508 + AO353_15820 0.60 -0.9 3,495,509 - AO353_15820 0.60 +1.1 3,495,509 - AO353_15820 0.60 -1.9 3,495,509 - AO353_15820 0.60 +0.4 3,495,509 - AO353_15820 0.60 -1.5 3,495,509 - AO353_15820 0.60 -1.5 3,495,509 - AO353_15820 0.60 -1.5 3,495,509 - AO353_15820 0.60 -1.9 3,495,625 + AO353_15820 0.75 -0.9 3,495,625 + AO353_15820 0.75 -3.1 3,495,625 + AO353_15820 0.75 -0.9 3,495,625 + AO353_15820 0.75 -0.9 3,495,625 + AO353_15820 0.75 +0.1 3,495,625 + AO353_15820 0.75 -0.1 3,495,625 + AO353_15820 0.75 -2.5 3,495,625 + AO353_15820 0.75 +1.7 3,495,626 - AO353_15820 0.75 +2.0 3,495,626 - AO353_15820 0.75 -1.9 3,495,626 - AO353_15820 0.75 -0.9 3,495,626 - AO353_15820 0.75 +1.7 3,495,626 - AO353_15820 0.75 -1.5 3,495,626 - AO353_15820 0.75 -0.3 3,495,626 - AO353_15820 0.75 +0.1 3,495,626 - AO353_15820 0.75 +1.6 3,495,626 - AO353_15820 0.75 -1.5 3,495,712 + AO353_15820 0.86 -2.5 3,495,712 + AO353_15820 0.86 -0.5 3,495,713 - AO353_15820 0.87 -2.9 3,495,713 - AO353_15820 0.87 -1.9 3,495,713 - AO353_15820 0.87 +0.1 3,495,747 + +1.1 3,495,747 + -0.7 3,495,747 + -2.5 3,495,748 - -1.7 3,495,748 - -0.9 3,495,801 + +1.1 3,495,802 - -1.2 3,495,802 - +2.7 3,495,802 - +1.0 3,495,802 - +0.7 3,495,842 + +1.7 3,495,842 + -1.1 3,495,843 - -1.2 3,495,878 + +0.2 3,495,878 + +1.2 3,495,878 + +0.6 3,495,878 + -3.1 3,495,878 + -0.9 3,495,878 + -0.9 3,495,878 + -2.9 3,495,879 - -0.5 3,495,879 - -2.5 3,495,879 - -1.0 3,496,055 + AO353_15825 0.30 -1.9 3,496,056 - AO353_15825 0.31 -1.9 3,496,056 - AO353_15825 0.31 -1.5 3,496,119 + AO353_15825 0.39 -2.2 3,496,120 - AO353_15825 0.39 -2.7 3,496,189 + AO353_15825 0.48 -0.9 3,496,190 - AO353_15825 0.48 -1.5 3,496,190 - AO353_15825 0.48 +2.9 3,496,390 - AO353_15825 0.73 +0.1 3,496,515 + AO353_15825 0.90 +0.1 3,496,516 - AO353_15825 0.90 +0.1 3,496,593 + +2.3 3,496,651 + +0.1 3,496,651 + +1.1 3,496,651 + +1.7 3,496,651 + -1.9 3,496,651 + +0.1 3,496,651 + -0.0 3,496,651 + -2.2 3,496,651 + -1.5 3,496,651 + -1.9 3,496,651 + +0.1 3,496,652 - -0.9 3,496,652 - +1.8 3,496,652 - +1.5 3,496,668 + +1.3 3,496,668 + -2.2 3,496,668 + -1.5 3,496,668 + +1.4 3,496,668 + -1.9 3,496,668 + +0.1 3,496,669 - -0.9 3,496,669 - -1.5 3,496,669 - +0.1 3,496,669 - +0.1 3,496,670 + -0.1 3,496,670 + +0.8 3,496,670 + -0.4 3,496,670 + +0.1 3,496,671 - -2.2 3,496,671 - +1.9 3,496,671 - -1.2 3,496,776 + -2.5 3,496,776 + -1.5 3,496,776 + -2.5 3,496,796 + -0.9 3,496,796 + -0.9 3,496,905 + AO353_15830 0.24 +1.5 3,496,905 + AO353_15830 0.24 -2.2 3,496,905 + AO353_15830 0.24 -2.2 3,496,905 + AO353_15830 0.24 -2.2 3,497,032 + AO353_15830 0.50 +1.4
Or see this region's nucleotide sequence