Experiment: Cisplatin 0.006 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_14675 and AO353_14680 are separated by 123 nucleotides AO353_14680 and AO353_14685 are separated by 116 nucleotides
AO353_14675: AO353_14675 - hypothetical protein, at 3,251,270 to 3,252,373
_14675
AO353_14680: AO353_14680 - tRNA-Met, at 3,252,497 to 3,252,573
_14680
AO353_14685: AO353_14685 - chemotaxis protein, at 3,252,690 to 3,254,747
_14685
Position (kb)
3252
3253 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 3251.678 kb on + strand, within AO353_14675 at 3251.678 kb on + strand, within AO353_14675 at 3251.678 kb on + strand, within AO353_14675 at 3251.678 kb on + strand, within AO353_14675 at 3251.679 kb on - strand, within AO353_14675 at 3251.679 kb on - strand, within AO353_14675 at 3251.699 kb on + strand, within AO353_14675 at 3251.699 kb on + strand, within AO353_14675 at 3251.699 kb on + strand, within AO353_14675 at 3251.699 kb on + strand, within AO353_14675 at 3251.699 kb on + strand, within AO353_14675 at 3251.700 kb on - strand, within AO353_14675 at 3251.700 kb on - strand, within AO353_14675 at 3251.700 kb on - strand, within AO353_14675 at 3251.700 kb on - strand, within AO353_14675 at 3251.715 kb on + strand, within AO353_14675 at 3251.716 kb on - strand, within AO353_14675 at 3251.716 kb on - strand, within AO353_14675 at 3251.716 kb on - strand, within AO353_14675 at 3251.763 kb on + strand, within AO353_14675 at 3251.763 kb on + strand, within AO353_14675 at 3251.763 kb on + strand, within AO353_14675 at 3251.764 kb on - strand, within AO353_14675 at 3251.764 kb on - strand, within AO353_14675 at 3251.764 kb on - strand, within AO353_14675 at 3251.764 kb on - strand, within AO353_14675 at 3251.837 kb on + strand, within AO353_14675 at 3251.838 kb on - strand, within AO353_14675 at 3251.838 kb on - strand, within AO353_14675 at 3251.951 kb on + strand, within AO353_14675 at 3251.951 kb on + strand, within AO353_14675 at 3251.952 kb on - strand, within AO353_14675 at 3251.990 kb on + strand, within AO353_14675 at 3251.990 kb on + strand, within AO353_14675 at 3251.991 kb on - strand, within AO353_14675 at 3251.991 kb on - strand, within AO353_14675 at 3252.020 kb on + strand, within AO353_14675 at 3252.021 kb on - strand, within AO353_14675 at 3252.021 kb on - strand, within AO353_14675 at 3252.035 kb on + strand, within AO353_14675 at 3252.035 kb on + strand, within AO353_14675 at 3252.035 kb on + strand, within AO353_14675 at 3252.036 kb on - strand, within AO353_14675 at 3252.036 kb on - strand, within AO353_14675 at 3252.036 kb on - strand, within AO353_14675 at 3252.036 kb on - strand, within AO353_14675 at 3252.036 kb on - strand, within AO353_14675 at 3252.036 kb on - strand, within AO353_14675 at 3252.098 kb on + strand, within AO353_14675 at 3252.099 kb on - strand, within AO353_14675 at 3252.114 kb on + strand, within AO353_14675 at 3252.114 kb on + strand, within AO353_14675 at 3252.114 kb on + strand, within AO353_14675 at 3252.114 kb on + strand, within AO353_14675 at 3252.115 kb on - strand, within AO353_14675 at 3252.115 kb on - strand, within AO353_14675 at 3252.170 kb on + strand, within AO353_14675 at 3252.171 kb on - strand, within AO353_14675 at 3252.284 kb on + strand at 3252.284 kb on + strand at 3252.336 kb on + strand at 3252.337 kb on - strand at 3252.337 kb on - strand at 3252.369 kb on + strand at 3252.369 kb on + strand at 3252.369 kb on + strand at 3252.369 kb on + strand at 3252.369 kb on + strand at 3252.370 kb on - strand at 3252.370 kb on - strand at 3252.371 kb on + strand at 3252.371 kb on + strand at 3252.371 kb on + strand at 3252.372 kb on - strand at 3252.372 kb on - strand at 3252.372 kb on - strand at 3252.372 kb on - strand at 3252.456 kb on + strand at 3252.457 kb on - strand at 3252.457 kb on - strand at 3252.637 kb on - strand at 3252.724 kb on - strand at 3252.724 kb on - strand at 3252.724 kb on - strand at 3252.858 kb on + strand at 3252.859 kb on - strand at 3253.475 kb on + strand, within AO353_14685 at 3253.475 kb on + strand, within AO353_14685 at 3253.475 kb on + strand, within AO353_14685 at 3253.476 kb on - strand, within AO353_14685 at 3253.476 kb on - strand, within AO353_14685
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.006 mg/ml remove 3,251,678 + AO353_14675 0.37 +0.8 3,251,678 + AO353_14675 0.37 -2.1 3,251,678 + AO353_14675 0.37 +1.8 3,251,678 + AO353_14675 0.37 -0.8 3,251,679 - AO353_14675 0.37 -2.8 3,251,679 - AO353_14675 0.37 -2.4 3,251,699 + AO353_14675 0.39 -2.1 3,251,699 + AO353_14675 0.39 +0.2 3,251,699 + AO353_14675 0.39 -2.6 3,251,699 + AO353_14675 0.39 -3.7 3,251,699 + AO353_14675 0.39 -2.4 3,251,700 - AO353_14675 0.39 -1.2 3,251,700 - AO353_14675 0.39 +0.2 3,251,700 - AO353_14675 0.39 -2.6 3,251,700 - AO353_14675 0.39 -1.0 3,251,715 + AO353_14675 0.40 +0.2 3,251,716 - AO353_14675 0.40 +0.6 3,251,716 - AO353_14675 0.40 -2.1 3,251,716 - AO353_14675 0.40 +2.3 3,251,763 + AO353_14675 0.45 +0.2 3,251,763 + AO353_14675 0.45 -1.4 3,251,763 + AO353_14675 0.45 +0.8 3,251,764 - AO353_14675 0.45 +0.2 3,251,764 - AO353_14675 0.45 -2.4 3,251,764 - AO353_14675 0.45 -1.4 3,251,764 - AO353_14675 0.45 +1.1 3,251,837 + AO353_14675 0.51 -0.8 3,251,838 - AO353_14675 0.51 +0.2 3,251,838 - AO353_14675 0.51 +1.8 3,251,951 + AO353_14675 0.62 -2.0 3,251,951 + AO353_14675 0.62 -2.1 3,251,952 - AO353_14675 0.62 -0.8 3,251,990 + AO353_14675 0.65 +0.2 3,251,990 + AO353_14675 0.65 -0.8 3,251,991 - AO353_14675 0.65 -1.8 3,251,991 - AO353_14675 0.65 -1.4 3,252,020 + AO353_14675 0.68 -1.8 3,252,021 - AO353_14675 0.68 +1.4 3,252,021 - AO353_14675 0.68 -2.4 3,252,035 + AO353_14675 0.69 +2.2 3,252,035 + AO353_14675 0.69 -0.6 3,252,035 + AO353_14675 0.69 -0.5 3,252,036 - AO353_14675 0.69 -0.3 3,252,036 - AO353_14675 0.69 -1.8 3,252,036 - AO353_14675 0.69 -0.8 3,252,036 - AO353_14675 0.69 -0.0 3,252,036 - AO353_14675 0.69 -3.2 3,252,036 - AO353_14675 0.69 +0.2 3,252,098 + AO353_14675 0.75 -0.2 3,252,099 - AO353_14675 0.75 +0.8 3,252,114 + AO353_14675 0.76 -0.8 3,252,114 + AO353_14675 0.76 -1.1 3,252,114 + AO353_14675 0.76 -1.1 3,252,114 + AO353_14675 0.76 +0.2 3,252,115 - AO353_14675 0.77 -2.1 3,252,115 - AO353_14675 0.77 -2.1 3,252,170 + AO353_14675 0.82 -1.4 3,252,171 - AO353_14675 0.82 -2.2 3,252,284 + +0.7 3,252,284 + +1.5 3,252,336 + +0.2 3,252,337 - +0.2 3,252,337 - +0.2 3,252,369 + +0.2 3,252,369 + -1.4 3,252,369 + -1.4 3,252,369 + +1.4 3,252,369 + +2.0 3,252,370 - +0.2 3,252,370 - +0.2 3,252,371 + -3.4 3,252,371 + +1.5 3,252,371 + +2.2 3,252,372 - -0.4 3,252,372 - +2.7 3,252,372 - -2.1 3,252,372 - -0.3 3,252,456 + +1.8 3,252,457 - +0.0 3,252,457 - +3.8 3,252,637 - -1.8 3,252,724 - -1.8 3,252,724 - -2.1 3,252,724 - -0.2 3,252,858 + -1.2 3,252,859 - -1.4 3,253,475 + AO353_14685 0.38 +0.2 3,253,475 + AO353_14685 0.38 +2.0 3,253,475 + AO353_14685 0.38 -3.1 3,253,476 - AO353_14685 0.38 -1.4 3,253,476 - AO353_14685 0.38 -1.4
Or see this region's nucleotide sequence