Experiment: Cisplatin 0.006 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_13900 and AO353_13905 are separated by 55 nucleotides AO353_13905 and AO353_13910 overlap by 4 nucleotides
AO353_13900: AO353_13900 - kinase, at 3,089,009 to 3,089,902
_13900
AO353_13905: AO353_13905 - tRNA (uracil-5-)-methyltransferase, at 3,089,958 to 3,091,037
_13905
AO353_13910: AO353_13910 - guanine permease, at 3,091,034 to 3,092,329
_13910
Position (kb)
3089
3090
3091
3092 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 3088.983 kb on + strand at 3088.984 kb on - strand at 3088.984 kb on - strand at 3088.984 kb on - strand at 3088.986 kb on + strand at 3088.986 kb on + strand at 3088.987 kb on - strand at 3088.987 kb on - strand at 3088.987 kb on - strand at 3088.987 kb on - strand at 3088.987 kb on - strand at 3089.000 kb on + strand at 3089.000 kb on + strand at 3089.000 kb on + strand at 3089.000 kb on + strand at 3089.000 kb on + strand at 3089.000 kb on + strand at 3089.000 kb on + strand at 3089.001 kb on - strand at 3089.001 kb on - strand at 3089.001 kb on - strand at 3089.001 kb on - strand at 3089.001 kb on - strand at 3089.001 kb on - strand at 3089.001 kb on - strand at 3089.086 kb on + strand at 3089.102 kb on + strand, within AO353_13900 at 3089.102 kb on + strand, within AO353_13900 at 3089.102 kb on + strand, within AO353_13900 at 3089.102 kb on + strand, within AO353_13900 at 3089.103 kb on - strand, within AO353_13900 at 3089.103 kb on - strand, within AO353_13900 at 3089.103 kb on - strand, within AO353_13900 at 3089.103 kb on - strand, within AO353_13900 at 3089.103 kb on - strand, within AO353_13900 at 3089.127 kb on + strand, within AO353_13900 at 3089.127 kb on + strand, within AO353_13900 at 3089.127 kb on + strand, within AO353_13900 at 3089.127 kb on + strand, within AO353_13900 at 3089.127 kb on + strand, within AO353_13900 at 3089.127 kb on + strand, within AO353_13900 at 3089.128 kb on - strand, within AO353_13900 at 3089.128 kb on - strand, within AO353_13900 at 3089.144 kb on + strand, within AO353_13900 at 3089.144 kb on + strand, within AO353_13900 at 3089.144 kb on + strand, within AO353_13900 at 3089.144 kb on + strand, within AO353_13900 at 3089.144 kb on + strand, within AO353_13900 at 3089.144 kb on + strand, within AO353_13900 at 3089.145 kb on - strand, within AO353_13900 at 3089.145 kb on - strand, within AO353_13900 at 3089.145 kb on - strand, within AO353_13900 at 3089.145 kb on - strand, within AO353_13900 at 3089.145 kb on - strand, within AO353_13900 at 3089.158 kb on + strand, within AO353_13900 at 3089.159 kb on - strand, within AO353_13900 at 3089.187 kb on - strand, within AO353_13900 at 3089.390 kb on + strand, within AO353_13900 at 3089.450 kb on + strand, within AO353_13900 at 3089.450 kb on + strand, within AO353_13900 at 3089.451 kb on - strand, within AO353_13900 at 3089.451 kb on - strand, within AO353_13900 at 3089.451 kb on - strand, within AO353_13900 at 3089.491 kb on + strand, within AO353_13900 at 3089.529 kb on + strand, within AO353_13900 at 3089.529 kb on + strand, within AO353_13900 at 3089.529 kb on + strand, within AO353_13900 at 3089.529 kb on + strand, within AO353_13900 at 3089.529 kb on + strand, within AO353_13900 at 3089.529 kb on + strand, within AO353_13900 at 3089.529 kb on + strand, within AO353_13900 at 3089.530 kb on - strand, within AO353_13900 at 3089.530 kb on - strand, within AO353_13900 at 3089.530 kb on - strand, within AO353_13900 at 3089.530 kb on - strand, within AO353_13900 at 3089.530 kb on - strand, within AO353_13900 at 3089.530 kb on - strand, within AO353_13900 at 3089.530 kb on - strand, within AO353_13900 at 3089.642 kb on + strand, within AO353_13900 at 3089.642 kb on + strand, within AO353_13900 at 3089.642 kb on + strand, within AO353_13900 at 3089.643 kb on + strand, within AO353_13900 at 3089.643 kb on - strand, within AO353_13900 at 3089.643 kb on - strand, within AO353_13900 at 3089.643 kb on - strand, within AO353_13900 at 3089.681 kb on + strand, within AO353_13900 at 3089.682 kb on - strand, within AO353_13900 at 3089.682 kb on - strand, within AO353_13900 at 3089.682 kb on - strand, within AO353_13900 at 3089.682 kb on - strand, within AO353_13900 at 3089.705 kb on + strand, within AO353_13900 at 3089.705 kb on + strand, within AO353_13900 at 3089.705 kb on + strand, within AO353_13900 at 3089.706 kb on - strand, within AO353_13900 at 3089.706 kb on - strand, within AO353_13900 at 3089.706 kb on - strand, within AO353_13900 at 3089.706 kb on - strand, within AO353_13900 at 3089.866 kb on + strand at 3089.866 kb on + strand at 3090.097 kb on + strand, within AO353_13905 at 3090.097 kb on + strand, within AO353_13905 at 3090.097 kb on + strand, within AO353_13905 at 3090.097 kb on + strand, within AO353_13905 at 3090.097 kb on + strand, within AO353_13905 at 3090.097 kb on + strand, within AO353_13905 at 3090.097 kb on + strand, within AO353_13905 at 3090.097 kb on + strand, within AO353_13905 at 3090.097 kb on + strand, within AO353_13905 at 3090.098 kb on - strand, within AO353_13905 at 3090.098 kb on - strand, within AO353_13905 at 3090.098 kb on - strand, within AO353_13905 at 3090.098 kb on - strand, within AO353_13905 at 3090.098 kb on - strand, within AO353_13905 at 3090.098 kb on - strand, within AO353_13905 at 3090.098 kb on - strand, within AO353_13905 at 3090.098 kb on - strand, within AO353_13905 at 3090.187 kb on + strand, within AO353_13905 at 3090.188 kb on - strand, within AO353_13905 at 3090.188 kb on - strand, within AO353_13905 at 3090.188 kb on - strand, within AO353_13905 at 3090.188 kb on - strand, within AO353_13905 at 3090.406 kb on + strand, within AO353_13905 at 3090.406 kb on + strand, within AO353_13905 at 3090.406 kb on + strand, within AO353_13905 at 3090.406 kb on + strand, within AO353_13905 at 3090.406 kb on + strand, within AO353_13905 at 3090.406 kb on + strand, within AO353_13905 at 3090.406 kb on + strand, within AO353_13905 at 3090.407 kb on - strand, within AO353_13905 at 3090.407 kb on - strand, within AO353_13905 at 3090.407 kb on - strand, within AO353_13905 at 3090.448 kb on + strand, within AO353_13905 at 3090.448 kb on + strand, within AO353_13905 at 3090.449 kb on - strand, within AO353_13905 at 3090.449 kb on - strand, within AO353_13905 at 3090.449 kb on - strand, within AO353_13905 at 3090.518 kb on - strand, within AO353_13905 at 3090.559 kb on + strand, within AO353_13905 at 3090.559 kb on + strand, within AO353_13905 at 3090.559 kb on + strand, within AO353_13905 at 3090.559 kb on + strand, within AO353_13905 at 3090.559 kb on + strand, within AO353_13905 at 3090.559 kb on + strand, within AO353_13905 at 3090.559 kb on + strand, within AO353_13905 at 3090.559 kb on + strand, within AO353_13905 at 3090.559 kb on + strand, within AO353_13905 at 3090.559 kb on + strand, within AO353_13905 at 3090.559 kb on + strand, within AO353_13905 at 3090.559 kb on + strand, within AO353_13905 at 3090.559 kb on + strand, within AO353_13905 at 3090.559 kb on + strand, within AO353_13905 at 3090.559 kb on + strand, within AO353_13905 at 3090.559 kb on + strand, within AO353_13905 at 3090.559 kb on + strand, within AO353_13905 at 3090.559 kb on + strand, within AO353_13905 at 3090.559 kb on + strand, within AO353_13905 at 3090.559 kb on + strand, within AO353_13905 at 3090.559 kb on + strand, within AO353_13905 at 3090.560 kb on - strand, within AO353_13905 at 3090.560 kb on - strand, within AO353_13905 at 3090.560 kb on - strand, within AO353_13905 at 3090.560 kb on - strand, within AO353_13905 at 3090.560 kb on - strand, within AO353_13905 at 3090.560 kb on - strand, within AO353_13905 at 3090.560 kb on - strand, within AO353_13905 at 3090.560 kb on - strand, within AO353_13905 at 3090.560 kb on - strand, within AO353_13905 at 3090.560 kb on - strand, within AO353_13905 at 3090.560 kb on - strand, within AO353_13905 at 3090.560 kb on - strand, within AO353_13905 at 3090.560 kb on - strand, within AO353_13905 at 3090.560 kb on - strand, within AO353_13905 at 3090.560 kb on - strand, within AO353_13905 at 3090.560 kb on - strand, within AO353_13905 at 3090.560 kb on - strand, within AO353_13905 at 3090.560 kb on - strand, within AO353_13905 at 3090.560 kb on - strand, within AO353_13905 at 3090.603 kb on + strand, within AO353_13905 at 3090.673 kb on + strand, within AO353_13905 at 3090.673 kb on + strand, within AO353_13905 at 3090.865 kb on + strand, within AO353_13905 at 3090.866 kb on - strand, within AO353_13905 at 3091.015 kb on + strand at 3091.015 kb on + strand at 3091.015 kb on + strand at 3091.015 kb on + strand at 3091.015 kb on + strand at 3091.015 kb on + strand at 3091.015 kb on + strand at 3091.016 kb on - strand at 3091.016 kb on - strand at 3091.016 kb on - strand at 3091.016 kb on - strand at 3091.176 kb on + strand, within AO353_13910 at 3091.176 kb on + strand, within AO353_13910 at 3091.176 kb on + strand, within AO353_13910 at 3091.176 kb on + strand, within AO353_13910 at 3091.177 kb on - strand, within AO353_13910 at 3091.177 kb on - strand, within AO353_13910 at 3091.177 kb on - strand, within AO353_13910 at 3091.177 kb on - strand, within AO353_13910 at 3091.177 kb on - strand, within AO353_13910 at 3091.177 kb on - strand, within AO353_13910 at 3091.177 kb on - strand, within AO353_13910 at 3091.177 kb on - strand, within AO353_13910 at 3091.241 kb on + strand, within AO353_13910 at 3091.241 kb on + strand, within AO353_13910 at 3091.241 kb on + strand, within AO353_13910 at 3091.241 kb on + strand, within AO353_13910 at 3091.242 kb on - strand, within AO353_13910 at 3091.242 kb on - strand, within AO353_13910 at 3091.422 kb on + strand, within AO353_13910 at 3091.422 kb on + strand, within AO353_13910 at 3091.422 kb on + strand, within AO353_13910 at 3091.422 kb on + strand, within AO353_13910 at 3091.422 kb on + strand, within AO353_13910 at 3091.422 kb on + strand, within AO353_13910 at 3091.422 kb on + strand, within AO353_13910 at 3091.423 kb on - strand, within AO353_13910 at 3091.423 kb on - strand, within AO353_13910 at 3091.568 kb on - strand, within AO353_13910 at 3091.568 kb on - strand, within AO353_13910
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.006 mg/ml remove 3,088,983 + -0.7 3,088,984 - +3.1 3,088,984 - -2.3 3,088,984 - -1.7 3,088,986 + -0.1 3,088,986 + +0.3 3,088,987 - +1.9 3,088,987 - -2.5 3,088,987 - -2.9 3,088,987 - -0.7 3,088,987 - +1.0 3,089,000 + +0.3 3,089,000 + -1.0 3,089,000 + -2.5 3,089,000 + +0.9 3,089,000 + -0.1 3,089,000 + +0.7 3,089,000 + -0.9 3,089,001 - +2.6 3,089,001 - -0.0 3,089,001 - +1.6 3,089,001 - -2.5 3,089,001 - -1.3 3,089,001 - -2.5 3,089,001 - -0.7 3,089,086 + -2.3 3,089,102 + AO353_13900 0.10 +2.0 3,089,102 + AO353_13900 0.10 +0.3 3,089,102 + AO353_13900 0.10 -0.2 3,089,102 + AO353_13900 0.10 -2.9 3,089,103 - AO353_13900 0.11 -1.3 3,089,103 - AO353_13900 0.11 +0.9 3,089,103 - AO353_13900 0.11 -1.3 3,089,103 - AO353_13900 0.11 -1.3 3,089,103 - AO353_13900 0.11 +0.3 3,089,127 + AO353_13900 0.13 -2.0 3,089,127 + AO353_13900 0.13 +1.3 3,089,127 + AO353_13900 0.13 -1.3 3,089,127 + AO353_13900 0.13 -0.0 3,089,127 + AO353_13900 0.13 +0.1 3,089,127 + AO353_13900 0.13 +1.6 3,089,128 - AO353_13900 0.13 -1.3 3,089,128 - AO353_13900 0.13 -1.3 3,089,144 + AO353_13900 0.15 -1.0 3,089,144 + AO353_13900 0.15 +0.0 3,089,144 + AO353_13900 0.15 -0.0 3,089,144 + AO353_13900 0.15 +0.3 3,089,144 + AO353_13900 0.15 -0.7 3,089,144 + AO353_13900 0.15 -0.4 3,089,145 - AO353_13900 0.15 -1.7 3,089,145 - AO353_13900 0.15 -1.7 3,089,145 - AO353_13900 0.15 -1.3 3,089,145 - AO353_13900 0.15 +0.9 3,089,145 - AO353_13900 0.15 +0.3 3,089,158 + AO353_13900 0.17 -2.3 3,089,159 - AO353_13900 0.17 -0.5 3,089,187 - AO353_13900 0.20 -2.0 3,089,390 + AO353_13900 0.43 -0.7 3,089,450 + AO353_13900 0.49 +0.3 3,089,450 + AO353_13900 0.49 +1.8 3,089,451 - AO353_13900 0.49 +1.6 3,089,451 - AO353_13900 0.49 +0.3 3,089,451 - AO353_13900 0.49 -2.5 3,089,491 + AO353_13900 0.54 +0.3 3,089,529 + AO353_13900 0.58 +1.3 3,089,529 + AO353_13900 0.58 +1.3 3,089,529 + AO353_13900 0.58 +1.7 3,089,529 + AO353_13900 0.58 -0.3 3,089,529 + AO353_13900 0.58 +2.3 3,089,529 + AO353_13900 0.58 +0.6 3,089,529 + AO353_13900 0.58 +2.6 3,089,530 - AO353_13900 0.58 -1.7 3,089,530 - AO353_13900 0.58 +0.3 3,089,530 - AO353_13900 0.58 -2.0 3,089,530 - AO353_13900 0.58 -3.2 3,089,530 - AO353_13900 0.58 +1.3 3,089,530 - AO353_13900 0.58 -1.3 3,089,530 - AO353_13900 0.58 +0.3 3,089,642 + AO353_13900 0.71 -1.7 3,089,642 + AO353_13900 0.71 +0.3 3,089,642 + AO353_13900 0.71 -1.4 3,089,643 + AO353_13900 0.71 +0.3 3,089,643 - AO353_13900 0.71 -1.3 3,089,643 - AO353_13900 0.71 +3.1 3,089,643 - AO353_13900 0.71 +0.9 3,089,681 + AO353_13900 0.75 +0.3 3,089,682 - AO353_13900 0.75 +0.3 3,089,682 - AO353_13900 0.75 +3.5 3,089,682 - AO353_13900 0.75 +2.7 3,089,682 - AO353_13900 0.75 +0.3 3,089,705 + AO353_13900 0.78 -2.3 3,089,705 + AO353_13900 0.78 +2.6 3,089,705 + AO353_13900 0.78 -1.7 3,089,706 - AO353_13900 0.78 +1.3 3,089,706 - AO353_13900 0.78 -1.3 3,089,706 - AO353_13900 0.78 +4.3 3,089,706 - AO353_13900 0.78 +0.3 3,089,866 + -1.3 3,089,866 + -0.9 3,090,097 + AO353_13905 0.13 +1.9 3,090,097 + AO353_13905 0.13 +2.3 3,090,097 + AO353_13905 0.13 -2.5 3,090,097 + AO353_13905 0.13 -1.3 3,090,097 + AO353_13905 0.13 -3.0 3,090,097 + AO353_13905 0.13 -1.7 3,090,097 + AO353_13905 0.13 -2.0 3,090,097 + AO353_13905 0.13 +0.7 3,090,097 + AO353_13905 0.13 -1.7 3,090,098 - AO353_13905 0.13 -1.7 3,090,098 - AO353_13905 0.13 -1.7 3,090,098 - AO353_13905 0.13 +2.0 3,090,098 - AO353_13905 0.13 -1.7 3,090,098 - AO353_13905 0.13 -2.0 3,090,098 - AO353_13905 0.13 -1.3 3,090,098 - AO353_13905 0.13 -0.7 3,090,098 - AO353_13905 0.13 -1.3 3,090,187 + AO353_13905 0.21 -2.5 3,090,188 - AO353_13905 0.21 +0.3 3,090,188 - AO353_13905 0.21 -0.7 3,090,188 - AO353_13905 0.21 -0.3 3,090,188 - AO353_13905 0.21 -1.3 3,090,406 + AO353_13905 0.41 +0.3 3,090,406 + AO353_13905 0.41 -1.7 3,090,406 + AO353_13905 0.41 -2.5 3,090,406 + AO353_13905 0.41 +1.3 3,090,406 + AO353_13905 0.41 +0.3 3,090,406 + AO353_13905 0.41 -2.0 3,090,406 + AO353_13905 0.41 +0.3 3,090,407 - AO353_13905 0.42 -1.7 3,090,407 - AO353_13905 0.42 +0.6 3,090,407 - AO353_13905 0.42 -2.3 3,090,448 + AO353_13905 0.45 -2.3 3,090,448 + AO353_13905 0.45 -0.7 3,090,449 - AO353_13905 0.45 -1.7 3,090,449 - AO353_13905 0.45 +1.7 3,090,449 - AO353_13905 0.45 -1.7 3,090,518 - AO353_13905 0.52 -2.3 3,090,559 + AO353_13905 0.56 -0.5 3,090,559 + AO353_13905 0.56 -0.7 3,090,559 + AO353_13905 0.56 +2.3 3,090,559 + AO353_13905 0.56 -2.3 3,090,559 + AO353_13905 0.56 -1.3 3,090,559 + AO353_13905 0.56 -2.3 3,090,559 + AO353_13905 0.56 +0.3 3,090,559 + AO353_13905 0.56 +3.3 3,090,559 + AO353_13905 0.56 -1.2 3,090,559 + AO353_13905 0.56 -1.3 3,090,559 + AO353_13905 0.56 -1.3 3,090,559 + AO353_13905 0.56 -0.7 3,090,559 + AO353_13905 0.56 -2.3 3,090,559 + AO353_13905 0.56 -1.7 3,090,559 + AO353_13905 0.56 +0.6 3,090,559 + AO353_13905 0.56 -0.2 3,090,559 + AO353_13905 0.56 +0.3 3,090,559 + AO353_13905 0.56 -1.3 3,090,559 + AO353_13905 0.56 +1.4 3,090,559 + AO353_13905 0.56 +2.9 3,090,559 + AO353_13905 0.56 +1.3 3,090,560 - AO353_13905 0.56 -1.3 3,090,560 - AO353_13905 0.56 -1.7 3,090,560 - AO353_13905 0.56 -0.7 3,090,560 - AO353_13905 0.56 +0.9 3,090,560 - AO353_13905 0.56 -1.3 3,090,560 - AO353_13905 0.56 +3.3 3,090,560 - AO353_13905 0.56 -1.3 3,090,560 - AO353_13905 0.56 -0.7 3,090,560 - AO353_13905 0.56 -0.3 3,090,560 - AO353_13905 0.56 -2.0 3,090,560 - AO353_13905 0.56 -2.0 3,090,560 - AO353_13905 0.56 -2.3 3,090,560 - AO353_13905 0.56 -0.7 3,090,560 - AO353_13905 0.56 -1.7 3,090,560 - AO353_13905 0.56 +1.1 3,090,560 - AO353_13905 0.56 -1.5 3,090,560 - AO353_13905 0.56 -3.3 3,090,560 - AO353_13905 0.56 -1.4 3,090,560 - AO353_13905 0.56 -1.7 3,090,603 + AO353_13905 0.60 -1.7 3,090,673 + AO353_13905 0.66 +2.3 3,090,673 + AO353_13905 0.66 +0.3 3,090,865 + AO353_13905 0.84 -0.7 3,090,866 - AO353_13905 0.84 -0.7 3,091,015 + +0.3 3,091,015 + +3.7 3,091,015 + +0.7 3,091,015 + +0.3 3,091,015 + +0.9 3,091,015 + -2.0 3,091,015 + +1.1 3,091,016 - -1.3 3,091,016 - +2.1 3,091,016 - -1.7 3,091,016 - -1.3 3,091,176 + AO353_13910 0.11 +0.3 3,091,176 + AO353_13910 0.11 -0.7 3,091,176 + AO353_13910 0.11 +0.7 3,091,176 + AO353_13910 0.11 -0.7 3,091,177 - AO353_13910 0.11 +2.6 3,091,177 - AO353_13910 0.11 +0.9 3,091,177 - AO353_13910 0.11 +2.1 3,091,177 - AO353_13910 0.11 +1.6 3,091,177 - AO353_13910 0.11 -0.9 3,091,177 - AO353_13910 0.11 +1.3 3,091,177 - AO353_13910 0.11 -1.0 3,091,177 - AO353_13910 0.11 +0.9 3,091,241 + AO353_13910 0.16 -0.0 3,091,241 + AO353_13910 0.16 -2.0 3,091,241 + AO353_13910 0.16 +0.6 3,091,241 + AO353_13910 0.16 -0.5 3,091,242 - AO353_13910 0.16 +2.1 3,091,242 - AO353_13910 0.16 +2.2 3,091,422 + AO353_13910 0.30 -1.3 3,091,422 + AO353_13910 0.30 +0.3 3,091,422 + AO353_13910 0.30 -1.7 3,091,422 + AO353_13910 0.30 +1.2 3,091,422 + AO353_13910 0.30 +1.9 3,091,422 + AO353_13910 0.30 +1.4 3,091,422 + AO353_13910 0.30 -2.5 3,091,423 - AO353_13910 0.30 -2.9 3,091,423 - AO353_13910 0.30 -1.3 3,091,568 - AO353_13910 0.41 +3.0 3,091,568 - AO353_13910 0.41 -0.1
Or see this region's nucleotide sequence