Experiment: Cisplatin 0.006 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_12335 and AO353_12340 are separated by 231 nucleotides AO353_12340 and AO353_12345 overlap by 4 nucleotides AO353_12345 and AO353_12350 overlap by 4 nucleotides AO353_12350 and AO353_12355 are separated by 10 nucleotides AO353_12355 and AO353_12360 are separated by 25 nucleotides
AO353_12335: AO353_12335 - chemotaxis protein, at 2,715,480 to 2,717,396
_12335
AO353_12340: AO353_12340 - 16S rRNA methyltransferase, at 2,717,628 to 2,718,335
_12340
AO353_12345: AO353_12345 - twin-arginine protein translocation system subunit TatC, at 2,718,332 to 2,719,126
_12345
AO353_12350: AO353_12350 - preprotein translocase, at 2,719,123 to 2,719,569
_12350
AO353_12355: AO353_12355 - preprotein translocase subunit SecA, at 2,719,580 to 2,719,861
_12355
AO353_12360: AO353_12360 - phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) , at 2,719,887 to 2,720,219
_12360
Position (kb)
2718
2719
2720 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2717.392 kb on + strand at 2717.392 kb on + strand at 2717.393 kb on - strand at 2717.393 kb on - strand at 2717.393 kb on - strand at 2717.393 kb on - strand at 2717.393 kb on - strand at 2717.393 kb on - strand at 2717.393 kb on - strand at 2717.411 kb on - strand at 2717.411 kb on - strand at 2717.421 kb on + strand at 2717.421 kb on + strand at 2717.421 kb on + strand at 2717.422 kb on - strand at 2717.422 kb on - strand at 2717.422 kb on - strand at 2717.431 kb on + strand at 2717.431 kb on + strand at 2717.431 kb on + strand at 2717.431 kb on + strand at 2717.431 kb on + strand at 2717.431 kb on + strand at 2717.431 kb on + strand at 2717.431 kb on + strand at 2717.432 kb on - strand at 2717.432 kb on - strand at 2717.432 kb on - strand at 2717.432 kb on - strand at 2717.432 kb on - strand at 2717.433 kb on + strand at 2717.433 kb on + strand at 2717.433 kb on + strand at 2717.433 kb on + strand at 2717.434 kb on - strand at 2717.434 kb on - strand at 2717.434 kb on - strand at 2717.443 kb on - strand at 2717.466 kb on + strand at 2717.466 kb on + strand at 2717.466 kb on + strand at 2717.466 kb on + strand at 2717.466 kb on + strand at 2717.541 kb on + strand at 2717.541 kb on + strand at 2717.541 kb on + strand at 2717.630 kb on - strand at 2717.630 kb on - strand at 2717.630 kb on - strand at 2717.735 kb on - strand, within AO353_12340 at 2718.425 kb on + strand, within AO353_12345 at 2718.552 kb on + strand, within AO353_12345 at 2718.739 kb on - strand, within AO353_12345 at 2718.817 kb on - strand, within AO353_12345 at 2718.817 kb on - strand, within AO353_12345 at 2718.991 kb on - strand, within AO353_12345 at 2719.171 kb on - strand, within AO353_12350 at 2719.171 kb on - strand, within AO353_12350 at 2719.171 kb on - strand, within AO353_12350 at 2719.171 kb on - strand, within AO353_12350 at 2719.171 kb on - strand, within AO353_12350 at 2719.171 kb on - strand, within AO353_12350 at 2719.189 kb on - strand, within AO353_12350 at 2719.189 kb on - strand, within AO353_12350 at 2719.189 kb on - strand, within AO353_12350 at 2719.189 kb on - strand, within AO353_12350 at 2719.571 kb on - strand at 2719.613 kb on - strand, within AO353_12355 at 2719.878 kb on - strand at 2719.997 kb on + strand, within AO353_12360 at 2719.997 kb on + strand, within AO353_12360 at 2719.997 kb on + strand, within AO353_12360 at 2719.997 kb on + strand, within AO353_12360 at 2719.997 kb on + strand, within AO353_12360 at 2719.998 kb on - strand, within AO353_12360 at 2719.998 kb on - strand, within AO353_12360 at 2719.998 kb on - strand, within AO353_12360 at 2719.998 kb on - strand, within AO353_12360 at 2719.998 kb on - strand, within AO353_12360 at 2719.998 kb on - strand, within AO353_12360 at 2719.998 kb on - strand, within AO353_12360 at 2719.998 kb on - strand, within AO353_12360 at 2720.000 kb on + strand, within AO353_12360 at 2720.000 kb on + strand, within AO353_12360 at 2720.000 kb on + strand, within AO353_12360 at 2720.001 kb on - strand, within AO353_12360 at 2720.001 kb on - strand, within AO353_12360 at 2720.001 kb on - strand, within AO353_12360 at 2720.001 kb on - strand, within AO353_12360 at 2720.001 kb on - strand, within AO353_12360 at 2720.001 kb on - strand, within AO353_12360 at 2720.026 kb on + strand, within AO353_12360 at 2720.027 kb on - strand, within AO353_12360 at 2720.027 kb on - strand, within AO353_12360 at 2720.031 kb on + strand, within AO353_12360 at 2720.031 kb on + strand, within AO353_12360 at 2720.031 kb on + strand, within AO353_12360 at 2720.031 kb on + strand at 2720.031 kb on + strand, within AO353_12360 at 2720.031 kb on + strand, within AO353_12360 at 2720.032 kb on - strand, within AO353_12360 at 2720.032 kb on - strand, within AO353_12360 at 2720.032 kb on - strand, within AO353_12360 at 2720.032 kb on - strand, within AO353_12360 at 2720.032 kb on - strand, within AO353_12360 at 2720.032 kb on - strand, within AO353_12360 at 2720.032 kb on - strand, within AO353_12360 at 2720.032 kb on - strand, within AO353_12360 at 2720.032 kb on - strand, within AO353_12360
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.006 mg/ml remove 2,717,392 + +1.6 2,717,392 + +2.5 2,717,393 - -0.6 2,717,393 - +0.4 2,717,393 - -0.2 2,717,393 - -2.5 2,717,393 - -2.0 2,717,393 - +1.4 2,717,393 - +1.0 2,717,411 - +0.4 2,717,411 - +0.4 2,717,421 + +0.8 2,717,421 + +0.4 2,717,421 + -3.0 2,717,422 - -2.2 2,717,422 - -2.2 2,717,422 - -1.2 2,717,431 + +0.8 2,717,431 + -2.5 2,717,431 + +0.4 2,717,431 + -0.6 2,717,431 + +1.2 2,717,431 + -1.6 2,717,431 + +0.4 2,717,431 + -0.1 2,717,432 - +0.4 2,717,432 - -1.6 2,717,432 - +0.1 2,717,432 - +2.4 2,717,432 - -2.5 2,717,433 + -1.0 2,717,433 + -1.2 2,717,433 + +1.4 2,717,433 + -1.6 2,717,434 - -1.6 2,717,434 - -2.5 2,717,434 - +1.8 2,717,443 - -1.2 2,717,466 + -1.1 2,717,466 + -0.6 2,717,466 + +0.5 2,717,466 + -2.0 2,717,466 + -0.1 2,717,541 + -1.2 2,717,541 + +0.9 2,717,541 + -0.6 2,717,630 - -1.2 2,717,630 - -1.6 2,717,630 - +1.6 2,717,735 - AO353_12340 0.15 +0.4 2,718,425 + AO353_12345 0.12 +0.4 2,718,552 + AO353_12345 0.28 -1.2 2,718,739 - AO353_12345 0.51 +0.7 2,718,817 - AO353_12345 0.61 +0.6 2,718,817 - AO353_12345 0.61 +2.5 2,718,991 - AO353_12345 0.83 -0.6 2,719,171 - AO353_12350 0.11 +2.5 2,719,171 - AO353_12350 0.11 -1.6 2,719,171 - AO353_12350 0.11 -3.0 2,719,171 - AO353_12350 0.11 -1.6 2,719,171 - AO353_12350 0.11 -0.4 2,719,171 - AO353_12350 0.11 +0.9 2,719,189 - AO353_12350 0.15 -1.2 2,719,189 - AO353_12350 0.15 +0.9 2,719,189 - AO353_12350 0.15 -0.2 2,719,189 - AO353_12350 0.15 +1.4 2,719,571 - +2.1 2,719,613 - AO353_12355 0.12 -1.2 2,719,878 - -1.2 2,719,997 + AO353_12360 0.33 -1.0 2,719,997 + AO353_12360 0.33 -0.4 2,719,997 + AO353_12360 0.33 -1.4 2,719,997 + AO353_12360 0.33 +1.6 2,719,997 + AO353_12360 0.33 +0.8 2,719,998 - AO353_12360 0.33 +0.2 2,719,998 - AO353_12360 0.33 -0.2 2,719,998 - AO353_12360 0.33 +0.7 2,719,998 - AO353_12360 0.33 -0.6 2,719,998 - AO353_12360 0.33 +0.1 2,719,998 - AO353_12360 0.33 -1.8 2,719,998 - AO353_12360 0.33 -1.2 2,719,998 - AO353_12360 0.33 +2.8 2,720,000 + AO353_12360 0.34 +2.9 2,720,000 + AO353_12360 0.34 +1.7 2,720,000 + AO353_12360 0.34 +1.4 2,720,001 - AO353_12360 0.34 -1.2 2,720,001 - AO353_12360 0.34 +1.4 2,720,001 - AO353_12360 0.34 -0.6 2,720,001 - AO353_12360 0.34 +3.2 2,720,001 - AO353_12360 0.34 -0.5 2,720,001 - AO353_12360 0.34 -1.6 2,720,026 + AO353_12360 0.42 +0.4 2,720,027 - AO353_12360 0.42 -2.8 2,720,027 - AO353_12360 0.42 -0.2 2,720,031 + AO353_12360 0.43 +1.2 2,720,031 + AO353_12360 0.43 +1.9 2,720,031 + AO353_12360 0.43 -1.2 2,720,031 + +0.4 2,720,031 + AO353_12360 0.43 +2.1 2,720,031 + AO353_12360 0.43 +0.4 2,720,032 - AO353_12360 0.44 -1.2 2,720,032 - AO353_12360 0.44 -0.0 2,720,032 - AO353_12360 0.44 +0.8 2,720,032 - AO353_12360 0.44 -2.0 2,720,032 - AO353_12360 0.44 +0.7 2,720,032 - AO353_12360 0.44 -1.2 2,720,032 - AO353_12360 0.44 +0.8 2,720,032 - AO353_12360 0.44 +2.3 2,720,032 - AO353_12360 0.44 +2.8
Or see this region's nucleotide sequence